Cow genome map
| Conread name: | unkn-54-33 |
| Conread position: | 6-266 |
| Cow position: | chr20:31377785-31377525 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 7-268 |
| Cow position: | chr20:25850571-25850309 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 188 |
| Conread position: | 12-269 |
| Cow position: | chr20:21914753-21915004 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 182 |
| Conread position: | 14-192 |
| Cow position: | chr20:3271130-3271310 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 14-252 |
| Cow position: | chr20:10854918-10854680 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 114, 109 |
| Conread position: | 14-255 |
| Cow position: | chr20:15097449-15097203 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 14-263 |
| Cow position: | chr20:23799313-23799567 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 71 |
| Conread position: | 14-266 |
| Cow position: | chr20:15292434-15292687 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 8 |
| Conread position: | 14-266 |
| Cow position: | chr20:28161198-28161451 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 6 |
| Conread position: | 14-266 |
| Cow position: | chr20:29948929-29949185 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 6 |
| Conread position: | 14-269 |
| Cow position: | chr20:5535365-5535624 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 6 |
| Conread position: | 14-269 |
| Cow position: | chr20:8003798-8003540 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 6 |
| Conread position: | 14-269 |
| Cow position: | chr20:12438333-12438075 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 7, 95 |
| Conread position: | 14-269 |
| Cow position: | chr20:13763332-13763593 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr20:16179388-16179128 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 14-269 |
| Cow position: | chr20:19438360-19438608 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 14-269 |
| Cow position: | chr20:22697696-22697947 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 14-269 |
| Cow position: | chr20:23469238-23468978 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 209 |
| Conread position: | 14-269 |
| Cow position: | chr20:28565166-28564905 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr20:30684748-30685010 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr20:38351099-38351358 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 14-270 |
| Cow position: | chr20:8992796-8992532 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 12, 248 |
| Conread position: | 17-266 |
| Cow position: | chr20:14870518-14870266 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 138, 161 |
| Conread position: | 20-257 |
| Cow position: | chr20:13679607-13679365 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 110 |
| Conread position: | 22-182 |
| Cow position: | chr20:7115050-7114885 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-239 |
| Cow position: | chr20:3679141-3678925 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 22-257 |
| Cow position: | chr20:21394031-21394271 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 179 |
| Conread position: | 22-258 |
| Cow position: | chr20:823197-823436 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 203 |
| Conread position: | 22-263 |
| Cow position: | chr20:35124932-35125179 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 22-266 |
| Cow position: | chr20:24371356-24371116 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 22-269 |
| Cow position: | chr20:25961533-25961785 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr20:42905642-42905887 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 130, 77 |
| Conread position: | 23-258 |
| Cow position: | chr20:8215956-8216194 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 84 |
| Conread position: | 23-269 |
| Cow position: | chr20:27869636-27869889 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 27-252 |
| Cow position: | chr20:22716888-22716661 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 115, 79 |
| Conread position: | 35-269 |
| Cow position: | chr20:12568968-12569207 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 37-268 |
| Cow position: | chr20:8974365-8974131 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 94, 88 |
| Conread position: | 39-266 |
| Cow position: | chr20:15065721-15065949 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 113, 162 |
| Conread position: | 108-269 |
| Cow position: | chr20:17661557-17661391 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 0 |
Show alignments to all cow chromosomes.