Cow genome map
| Conread name: | unkn-54-33 |
| Conread position: | 5-266 |
| Cow position: | chr22:15955813-15955550 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 150, 17 |
| Conread position: | 14-229 |
| Cow position: | chr22:525321-525100 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 14-234 |
| Cow position: | chr22:35942409-35942188 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 134, 6 |
| Conread position: | 14-238 |
| Cow position: | chr22:1269420-1269194 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 7, 75 |
| Conread position: | 14-258 |
| Cow position: | chr22:8739846-8739596 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-258 |
| Cow position: | chr22:10909466-10909218 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 6 |
| Conread position: | 14-269 |
| Cow position: | chr22:560331-560074 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 14-269 |
| Cow position: | chr22:1520641-1520389 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 56 |
| Conread position: | 14-269 |
| Cow position: | chr22:12731302-12731042 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 7, 210 |
| Conread position: | 14-269 |
| Cow position: | chr22:15313582-15313322 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 14-269 |
| Cow position: | chr22:17328366-17328105 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr22:18816012-18815751 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr22:31313713-31313973 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 160 |
| Conread position: | 14-269 |
| Cow position: | chr22:34168704-34168965 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr22:36861160-36860904 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 199 |
| Conread position: | 14-269 |
| Cow position: | chr22:44369259-44368999 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 14-269 |
| Cow position: | chr22:44396816-44397077 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr22:44934350-44934611 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr22:46630674-46630415 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 146, 85 |
| Conread position: | 14-270 |
| Cow position: | chr22:6502761-6502504 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 138, 6 |
| Conread position: | 14-272 |
| Cow position: | chr22:5308474-5308732 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 14-278 |
| Cow position: | chr22:326797-326534 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 22-175 |
| Cow position: | chr22:1322505-1322662 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 130, 64 |
| Conread position: | 22-194 |
| Cow position: | chr22:46581212-46581035 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-206 |
| Cow position: | chr22:16814262-16814451 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 150 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-222 |
| Cow position: | chr22:37132803-37133007 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 130, 23 |
| Conread position: | 22-252 |
| Cow position: | chr22:19143309-19143080 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 132, 186 |
| Conread position: | 22-252 |
| Cow position: | chr22:23854039-23854265 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 132, 47 |
| Conread position: | 22-258 |
| Cow position: | chr22:3277980-3277739 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 94 |
| Conread position: | 22-261 |
| Cow position: | chr22:14208033-14207790 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-266 |
| Cow position: | chr22:42991554-42991803 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:537476-537727 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 33 |
| Conread position: | 22-269 |
| Cow position: | chr22:693999-694252 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:1879168-1879420 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:3306019-3305772 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 178 |
| Conread position: | 22-269 |
| Cow position: | chr22:5232906-5232653 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:6021039-6021289 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 94 |
| Conread position: | 22-269 |
| Cow position: | chr22:18027655-18027908 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:20240467-20240216 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 26 |
| Conread position: | 22-269 |
| Cow position: | chr22:21589716-21589964 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 80 |
| Conread position: | 22-269 |
| Cow position: | chr22:24950472-24950724 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:27284408-27284659 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 23 |
| Conread position: | 22-269 |
| Cow position: | chr22:27309401-27309149 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:35671980-35671728 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 22-269 |
| Cow position: | chr22:35907012-35906775 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 125, 167 |
| Conread position: | 22-269 |
| Cow position: | chr22:37072697-37072454 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 22-269 |
| Cow position: | chr22:39469140-39468894 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 187 |
| Conread position: | 22-272 |
| Cow position: | chr22:48004916-48005172 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 33 |
| Conread position: | 23-266 |
| Cow position: | chr22:44352597-44352360 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 23-269 |
| Cow position: | chr22:31334654-31334408 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 177 |
| Conread position: | 25-269 |
| Cow position: | chr22:14629796-14630045 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 27-202 |
| Cow position: | chr22:36269615-36269796 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 13 |
| Conread position: | 31-269 |
| Cow position: | chr22:36184141-36184384 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 36-265 |
| Cow position: | chr22:291762-291530 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 19 |
| Conread position: | 42-269 |
| Cow position: | chr22:42988958-42989190 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 51-268 |
| Cow position: | chr22:1282950-1282735 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 101, 126 |
| Conread position: | 68-263 |
| Cow position: | chr22:44457477-44457677 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 70-269 |
| Cow position: | chr22:44491457-44491660 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 85, 177 |
| Conread position: | 93-268 |
| Cow position: | chr22:11640176-11640001 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 115 |
| Conread position: | 93-269 |
| Cow position: | chr22:2627328-2627152 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 107 |
| Conread position: | 164-269 |
| Cow position: | chr22:11804535-11804430 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.