Cow genome map
| Conread name: | unkn-54-33 |
| Conread position: | 1-153 |
| Cow position: | chr23:22146892-22146740 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 7-241 |
| Cow position: | chr23:4434819-4435057 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 14, 202 |
| Conread position: | 8-266 |
| Cow position: | chr23:31649580-31649324 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 9-266 |
| Cow position: | chr23:13510028-13510286 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 144, 13 |
| Conread position: | 11-263 |
| Cow position: | chr23:36031005-36030752 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 9 |
| Conread position: | 11-269 |
| Cow position: | chr23:28913763-28914023 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 11-269 |
| Cow position: | chr23:29403571-29403311 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 10, 70 |
| Conread position: | 14-128 |
| Cow position: | chr23:2026745-2026630 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-135 |
| Cow position: | chr23:2574908-2575029 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 68 |
| Conread position: | 14-227 |
| Cow position: | chr23:11778862-11779076 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 14-263 |
| Cow position: | chr23:4752969-4753219 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 14-263 |
| Cow position: | chr23:4817389-4817644 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-263 |
| Cow position: | chr23:15177444-15177696 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 195 |
| Conread position: | 14-265 |
| Cow position: | chr23:16615065-16614813 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 14-266 |
| Cow position: | chr23:3014767-3015025 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-268 |
| Cow position: | chr23:28108029-28108279 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 139 |
| Conread position: | 14-269 |
| Cow position: | chr23:1024650-1024383 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 6 |
| Conread position: | 14-269 |
| Cow position: | chr23:2716762-2717020 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 195 |
| Conread position: | 14-269 |
| Cow position: | chr23:2757968-2758229 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 160 |
| Conread position: | 14-269 |
| Cow position: | chr23:2794863-2794603 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 126 |
| Conread position: | 14-269 |
| Cow position: | chr23:4889046-4889312 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 7, 67 |
| Conread position: | 14-269 |
| Cow position: | chr23:5874273-5874021 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 14-269 |
| Cow position: | chr23:14965378-14965117 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr23:16616472-16616211 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr23:19489915-19490171 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 188 |
| Conread position: | 14-269 |
| Cow position: | chr23:20302578-20302829 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 140 |
| Conread position: | 14-269 |
| Cow position: | chr23:27399873-27400134 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 21-258 |
| Cow position: | chr23:2341469-2341713 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 22-193 |
| Cow position: | chr23:31594868-31594693 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 131, 102 |
| Conread position: | 22-242 |
| Cow position: | chr23:2781831-2781607 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 85 |
| Conread position: | 22-244 |
| Cow position: | chr23:17785946-17785719 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-258 |
| Cow position: | chr23:2312862-2312623 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 133, 27 |
| Conread position: | 22-258 |
| Cow position: | chr23:4510460-4510687 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 22-258 |
| Cow position: | chr23:19950211-19949978 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 191 |
| Conread position: | 22-266 |
| Cow position: | chr23:28217666-28217915 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 22-266 |
| Cow position: | chr23:28368144-28367895 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-268 |
| Cow position: | chr23:4360205-4360436 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 243, 64 |
| Conread position: | 22-269 |
| Cow position: | chr23:4640247-4639995 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 22-269 |
| Cow position: | chr23:23830336-23830588 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr23:27970916-27971168 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 22-269 |
| Cow position: | chr23:28025045-28025297 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 22-269 |
| Cow position: | chr23:28077749-28077996 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 70 |
| Conread position: | 22-269 |
| Cow position: | chr23:31447191-31447443 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 23-265 |
| Cow position: | chr23:15219520-15219280 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 171 |
| Conread position: | 23-269 |
| Cow position: | chr23:20155832-20155581 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 25-189 |
| Cow position: | chr23:25683655-25683486 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 30, 110 |
| Conread position: | 25-266 |
| Cow position: | chr23:966956-966713 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 183 |
| Conread position: | 25-269 |
| Cow position: | chr23:14974170-14973929 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 130, 15 |
| Conread position: | 25-279 |
| Cow position: | chr23:15877381-15877130 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 42-266 |
| Cow position: | chr23:1402093-1401877 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 46-224 |
| Cow position: | chr23:29451916-29451734 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 109, 98 |
| Conread position: | 70-269 |
| Cow position: | chr23:16499021-16498818 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 85, 69 |
| Conread position: | 95-269 |
| Cow position: | chr23:3880626-3880452 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 106-269 |
| Cow position: | chr23:14262331-14262491 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 51, 20 |
| Conread position: | 109-265 |
| Cow position: | chr23:12887514-12887358 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 116 |
| Conread position: | 110-269 |
| Cow position: | chr23:3706586-3706748 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 45, 20 |
| Conread position: | 113-266 |
| Cow position: | chr23:618978-618823 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 42, 111 |
| Conread position: | 117-269 |
| Cow position: | chr23:2026610-2026453 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 151-258 |
| Cow position: | chr23:38794715-38794822 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.