Cow genome map
| Conread name: | unkn-54-33 | 
| Conread position: | 1-194 | 
| Cow position: | chr3:70097509-70097709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 8, 12 | 
| Conread position: | 6-269 | 
| Cow position: | chr3:64027799-64027530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 9-192 | 
| Cow position: | chr3:54341962-54341779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 146, 83 | 
| Conread position: | 11-242 | 
| Cow position: | chr3:45895260-45895016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 10, 132 | 
| Conread position: | 11-242 | 
| Cow position: | chr3:45974795-45975037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 10, 130 | 
| Conread position: | 11-259 | 
| Cow position: | chr3:51940126-51939880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 140, 35 | 
| Conread position: | 11-266 | 
| Cow position: | chr3:5883836-5884094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 198 | 
| Conread position: | 11-269 | 
| Cow position: | chr3:23213779-23213515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 11-269 | 
| Cow position: | chr3:34030600-34030339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 189 | 
| Conread position: | 12-202 | 
| Cow position: | chr3:77443654-77443845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 9, 88 | 
| Conread position: | 14-153 | 
| Cow position: | chr3:74439598-74439738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-184 | 
| Cow position: | chr3:77424106-77424284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-196 | 
| Cow position: | chr3:4028045-4028226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 14-197 | 
| Cow position: | chr3:66991392-66991572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 9, 104 | 
| Conread position: | 14-201 | 
| Cow position: | chr3:21304495-21304304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 117, 6 | 
| Conread position: | 14-238 | 
| Cow position: | chr3:594878-595108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-255 | 
| Cow position: | chr3:5995400-5995156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 7, 85 | 
| Conread position: | 14-255 | 
| Cow position: | chr3:32841724-32841474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 9, 68 | 
| Conread position: | 14-258 | 
| Cow position: | chr3:6686111-6686355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 6 | 
| Conread position: | 14-258 | 
| Cow position: | chr3:29578928-29579172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 209 | 
| Conread position: | 14-259 | 
| Cow position: | chr3:36881619-36881366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 7.00649e-43 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-263 | 
| Cow position: | chr3:7480931-7480681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 51 | 
| Conread position: | 14-263 | 
| Cow position: | chr3:46502835-46503088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 199 | 
| Conread position: | 14-263 | 
| Cow position: | chr3:53515907-53516162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-263 | 
| Cow position: | chr3:56340125-56339872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 183 | 
| Conread position: | 14-265 | 
| Cow position: | chr3:10239955-10240212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 246 | 
| Conread position: | 14-266 | 
| Cow position: | chr3:5953885-5953628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 117 | 
| Conread position: | 14-266 | 
| Cow position: | chr3:18542106-18541852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 73 | 
| Conread position: | 14-266 | 
| Cow position: | chr3:23290041-23289783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 94 | 
| Conread position: | 14-266 | 
| Cow position: | chr3:42631719-42631974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 9, 49 | 
| Conread position: | 14-268 | 
| Cow position: | chr3:57484428-57484169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 45 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:18811801-18812063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:21182386-21182135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 79 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:40823688-40823946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 201 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:42432534-42432774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 7, 32 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:48230161-48229909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 32 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:49137237-49136985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 32 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:49544909-49544652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 62 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:49678093-49678356 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 113 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:50011972-50012225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 147, 184 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:50915627-50915887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 95 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:72630370-72630629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 32 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:75040868-75040607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-269 | 
| Cow position: | chr3:78027108-78026864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 7, 17 | 
| Conread position: | 22-141 | 
| Cow position: | chr3:24591017-24590898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 22-153 | 
| Cow position: | chr3:7169096-7169228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 22-233 | 
| Cow position: | chr3:60208301-60208086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 22-242 | 
| Cow position: | chr3:6782688-6782910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 104 | 
| Conread position: | 22-250 | 
| Cow position: | chr3:45033044-45033278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 22-251 | 
| Cow position: | chr3:67528659-67528884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 9, 39 | 
| Conread position: | 22-255 | 
| Cow position: | chr3:49613673-49613435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 230 | 
| Conread position: | 22-258 | 
| Cow position: | chr3:3982058-3982292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 133, 47 | 
| Conread position: | 22-258 | 
| Cow position: | chr3:7158412-7158171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-258 | 
| Cow position: | chr3:19878961-19879202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-258 | 
| Cow position: | chr3:37969351-37969590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 133, 76 | 
| Conread position: | 22-258 | 
| Cow position: | chr3:52863826-52863584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-260 | 
| Cow position: | chr3:18463263-18463020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 82, 154 | 
| Conread position: | 22-260 | 
| Cow position: | chr3:19939183-19939435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 127, 104 | 
| Conread position: | 22-266 | 
| Cow position: | chr3:30314863-30315112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-266 | 
| Cow position: | chr3:46860999-46860751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 237 | 
| Conread position: | 22-266 | 
| Cow position: | chr3:48842475-48842720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 190 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:1516459-1516711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:2917764-2918016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:3523325-3523575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 85 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:14439457-14439207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 207 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:18859717-18859966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 130, 32 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:19736884-19737136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:19756648-19756395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:20380847-20381096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 202 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:22336192-22336444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:24314771-24315022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 65 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:27918739-27918990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:29330967-29330715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:36117966-36118217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 93 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:41211431-41211179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:47081107-47080855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:51242676-51242926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 187 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:59861676-59861928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:64017058-64016807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 48 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:68699668-68699410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr3:68873451-68873199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 194 | 
| Conread position: | 22-279 | 
| Cow position: | chr3:46679735-46679995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 104 | 
| Conread position: | 23-258 | 
| Cow position: | chr3:6878747-6878523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 133, 31 | 
| Conread position: | 23-258 | 
| Cow position: | chr3:66890658-66890418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 0 | 
| Conread position: | 23-269 | 
| Cow position: | chr3:66620484-66620737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 24-266 | 
| Cow position: | chr3:40339806-40339562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 200 | 
| Conread position: | 24-269 | 
| Cow position: | chr3:2907457-2907216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 26 | 
| Conread position: | 24-269 | 
| Cow position: | chr3:32622731-32622489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 128, 180 | 
| Conread position: | 25-259 | 
| Cow position: | chr3:18575887-18575653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 71, 107 | 
| Conread position: | 25-266 | 
| Cow position: | chr3:4737666-4737423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 14, 80 | 
| Conread position: | 25-268 | 
| Cow position: | chr3:37625282-37625524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 45, 71 | 
| Conread position: | 27-252 | 
| Cow position: | chr3:15179014-15179241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 112, 79 | 
| Conread position: | 28-264 | 
| Cow position: | chr3:58947942-58948166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 127, 34 | 
| Conread position: | 28-265 | 
| Cow position: | chr3:47177966-47177724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 28-269 | 
| Cow position: | chr3:64650936-64651182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 29-269 | 
| Cow position: | chr3:63003231-63002992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 175 | 
| Conread position: | 31-278 | 
| Cow position: | chr3:49334102-49334351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 28, 15 | 
| Conread position: | 38-201 | 
| Cow position: | chr3:19721839-19721671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 39-242 | 
| Cow position: | chr3:3055001-3055198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 40-277 | 
| Cow position: | chr3:52861811-52862043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 95, 60 | 
| Conread position: | 41-269 | 
| Cow position: | chr3:4286121-4286354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 63-269 | 
| Cow position: | chr3:2710520-2710309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 0 | 
| Conread position: | 69-266 | 
| Cow position: | chr3:48059078-48058875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 71-217 | 
| Cow position: | chr3:56322023-56322174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 71-269 | 
| Cow position: | chr3:19944610-19944807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 81, 106 | 
| Conread position: | 96-242 | 
| Cow position: | chr3:38493632-38493783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 99-250 | 
| Cow position: | chr3:64357406-64357249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 136-258 | 
| Cow position: | chr3:24589584-24589461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 39 | 
| Conread position: | 151-269 | 
| Cow position: | chr3:19800740-19800622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 157-269 | 
| Cow position: | chr3:7169656-7169768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
