Cow genome map
| Conread name: | unkn-54-33 |
| Conread position: | 5-278 |
| Cow position: | chr4:6211821-6211539 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 11-258 |
| Cow position: | chr4:14821445-14821200 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 137, 11 |
| Conread position: | 11-268 |
| Cow position: | chr4:31565201-31564942 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 14-153 |
| Cow position: | chr4:12587405-12587545 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-153 |
| Cow position: | chr4:12607564-12607426 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 14-153 |
| Cow position: | chr4:33493931-33494071 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-193 |
| Cow position: | chr4:21256454-21256640 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 14-255 |
| Cow position: | chr4:18517002-18517246 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 14-258 |
| Cow position: | chr4:11111316-11111067 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 14-258 |
| Cow position: | chr4:60264058-60263810 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 196 |
| Conread position: | 14-265 |
| Cow position: | chr4:46664622-46664878 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 191 |
| Conread position: | 14-266 |
| Cow position: | chr4:45049192-45048934 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-268 |
| Cow position: | chr4:28831446-28831695 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 195 |
| Conread position: | 14-268 |
| Cow position: | chr4:36896474-36896734 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr4:6490258-6490002 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 14-269 |
| Cow position: | chr4:12241111-12240848 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 185 |
| Conread position: | 14-269 |
| Cow position: | chr4:16359988-16360239 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 196 |
| Conread position: | 14-269 |
| Cow position: | chr4:17926148-17925886 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr4:19251662-19251914 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 190, 6 |
| Conread position: | 14-269 |
| Cow position: | chr4:25599396-25599135 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr4:33072721-33072460 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chr4:44725191-44725451 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-280 |
| Cow position: | chr4:11837532-11837275 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 20-269 |
| Cow position: | chr4:13493425-13493679 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 22-124 |
| Cow position: | chr4:65223425-65223323 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-252 |
| Cow position: | chr4:6268522-6268284 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 22-258 |
| Cow position: | chr4:1930515-1930275 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 9 |
| Conread position: | 22-258 |
| Cow position: | chr4:9354667-9354427 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 174 |
| Conread position: | 22-259 |
| Cow position: | chr4:18190514-18190757 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-263 |
| Cow position: | chr4:26886746-26886500 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-265 |
| Cow position: | chr4:3125904-3126151 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 236 |
| Conread position: | 22-266 |
| Cow position: | chr4:18424416-18424167 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr4:100825-100573 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr4:356024-356270 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 58 |
| Conread position: | 22-269 |
| Cow position: | chr4:4416190-4416435 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 133, 47 |
| Conread position: | 22-269 |
| Cow position: | chr4:5880274-5880526 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr4:13548138-13548389 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 33 |
| Conread position: | 22-269 |
| Cow position: | chr4:16326666-16326414 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr4:31669387-31669636 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 186 |
| Conread position: | 22-269 |
| Cow position: | chr4:32212276-32212528 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 22-269 |
| Cow position: | chr4:43319531-43319279 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chr4:43881224-43881466 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 130, 191 |
| Conread position: | 22-270 |
| Cow position: | chr4:41954582-41954832 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 202 |
| Conread position: | 22-270 |
| Cow position: | chr4:41958237-41958487 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 202 |
| Conread position: | 22-270 |
| Cow position: | chr4:48026512-48026767 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 23-269 |
| Cow position: | chr4:34184404-34184180 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 23-269 |
| Cow position: | chr4:57984097-57984348 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 25-266 |
| Cow position: | chr4:22472648-22472884 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 47 |
| Conread position: | 25-266 |
| Cow position: | chr4:64984462-64984702 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 174 |
| Conread position: | 25-268 |
| Cow position: | chr4:1496272-1496031 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 129 |
| Conread position: | 25-268 |
| Cow position: | chr4:16056712-16056961 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 25-280 |
| Cow position: | chr4:43454788-43455041 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 125, 99 |
| Conread position: | 34-269 |
| Cow position: | chr4:29531753-29531519 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 181 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 113, 159 |
| Conread position: | 39-269 |
| Cow position: | chr4:41120448-41120683 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 41-275 |
| Cow position: | chr4:27295378-27295137 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 43-276 |
| Cow position: | chr4:44925377-44925146 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 106, 51 |
| Conread position: | 48-269 |
| Cow position: | chr4:529533-529760 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 54-269 |
| Cow position: | chr4:159296-159514 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 101, 144 |
| Conread position: | 66-258 |
| Cow position: | chr4:47254856-47254658 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 82-265 |
| Cow position: | chr4:54158801-54158987 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 85-257 |
| Cow position: | chr4:27301279-27301116 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 167, 80 |
| Conread position: | 108-269 |
| Cow position: | chr4:27333903-27334069 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 151-260 |
| Cow position: | chr4:41332956-41333065 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.