Cow genome map
| Conread name: | unkn-54-33 | 
| Conread position: | 4-269 | 
| Cow position: | chr6:38900841-38900571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 8, 130 | 
| Conread position: | 6-269 | 
| Cow position: | chr6:26670539-26670271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 172 | 
| Conread position: | 7-183 | 
| Cow position: | chr6:65881241-65881423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 7-269 | 
| Cow position: | chr6:43793381-43793112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 16, 75 | 
| Conread position: | 11-227 | 
| Cow position: | chr6:47042859-47042637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 11-266 | 
| Cow position: | chr6:40867222-40866966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 10, 191 | 
| Conread position: | 14-202 | 
| Cow position: | chr6:8021268-8021449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 7, 80 | 
| Conread position: | 14-221 | 
| Cow position: | chr6:8202079-8202292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-232 | 
| Cow position: | chr6:55543983-55543759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-234 | 
| Cow position: | chr6:25794111-25794335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 9, 45 | 
| Conread position: | 14-250 | 
| Cow position: | chr6:39050882-39050647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 138, 9 | 
| Conread position: | 14-255 | 
| Cow position: | chr6:51086282-51086528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 109 | 
| Conread position: | 14-261 | 
| Cow position: | chr6:14852241-14851988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-263 | 
| Cow position: | chr6:8760962-8760708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 95 | 
| Conread position: | 14-263 | 
| Cow position: | chr6:17046396-17046651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-263 | 
| Cow position: | chr6:30274836-30274586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 181 | 
| Conread position: | 14-263 | 
| Cow position: | chr6:58027095-58027345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 34 | 
| Conread position: | 14-265 | 
| Cow position: | chr6:10643889-10644132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 7, 189 | 
| Conread position: | 14-266 | 
| Cow position: | chr6:24239397-24239651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 125 | 
| Conread position: | 14-266 | 
| Cow position: | chr6:34892663-34892406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 209 | 
| Conread position: | 14-266 | 
| Cow position: | chr6:39437889-39438140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 161 | 
| Conread position: | 14-266 | 
| Cow position: | chr6:40813329-40813072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 33 | 
| Conread position: | 14-268 | 
| Cow position: | chr6:15280213-15279958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 45 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:3277609-3277359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 132, 39 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:5949438-5949177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:6566949-6567191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 9e-37 | 
| Alignm gaps (pig, cow): | 7, 66 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:15140841-15140585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 45 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:28105512-28105256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 32 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:29311834-29312095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:35876373-35876116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 191 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:36526391-36526649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 220 | 
| Conread position: | 14-269 | 
| Cow position: | chr6:52693366-52693625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 117 | 
| Conread position: | 14-270 | 
| Cow position: | chr6:7178938-7178671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 7, 154 | 
| Conread position: | 21-258 | 
| Cow position: | chr6:1099832-1099592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 33, 80 | 
| Conread position: | 21-263 | 
| Cow position: | chr6:28275331-28275574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 153 | 
| Conread position: | 22-229 | 
| Cow position: | chr6:2887532-2887744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 22-232 | 
| Cow position: | chr6:25214606-25214821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 130, 190 | 
| Conread position: | 22-251 | 
| Cow position: | chr6:65928315-65928550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-257 | 
| Cow position: | chr6:66232163-66232402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 6.02558e-44 | 
| Alignm gaps (pig, cow): | 133, 79 | 
| Conread position: | 22-258 | 
| Cow position: | chr6:27169926-27170166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 105 | 
| Conread position: | 22-258 | 
| Cow position: | chr6:38233185-38233422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 134, 41 | 
| Conread position: | 22-263 | 
| Cow position: | chr6:20560761-20560515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-265 | 
| Cow position: | chr6:13847370-13847619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 177 | 
| Conread position: | 22-265 | 
| Cow position: | chr6:58600832-58601074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 126, 81 | 
| Conread position: | 22-266 | 
| Cow position: | chr6:30479455-30479699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 130, 178 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:331121-330869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:1411598-1411346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:1822282-1822030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:3889133-3888885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 165 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:7141118-7140865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:10499379-10499127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:12665968-12665722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 23 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:13104403-13104654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 36 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:13944252-13944504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:16052224-16052477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:24323036-24322784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:27470949-27471199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 9, 187 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:28063681-28063932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 134, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:39908872-39909124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:40252006-40252258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 125, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:40275433-40275685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 65 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:43618060-43618312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:44150211-44149959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:59918724-59918474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 58 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:64715581-64715828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 131, 182 | 
| Conread position: | 22-269 | 
| Cow position: | chr6:69221865-69221613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 0 | 
| Conread position: | 22-270 | 
| Cow position: | chr6:65841937-65842183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 130, 104 | 
| Conread position: | 22-278 | 
| Cow position: | chr6:2375046-2375306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 130, 254 | 
| Conread position: | 22-278 | 
| Cow position: | chr6:44032137-44032397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 254 | 
| Conread position: | 23-258 | 
| Cow position: | chr6:13317156-13316915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 23-263 | 
| Cow position: | chr6:11724758-11724516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 8 | 
| Conread position: | 24-255 | 
| Cow position: | chr6:27529654-27529418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 0 | 
| Conread position: | 24-269 | 
| Cow position: | chr6:68027137-68027387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 0 | 
| Conread position: | 25-258 | 
| Cow position: | chr6:40315738-40315974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 130, 21 | 
| Conread position: | 25-269 | 
| Cow position: | chr6:15477257-15477504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 65, 108 | 
| Conread position: | 26-268 | 
| Cow position: | chr6:21973006-21973254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 27-258 | 
| Cow position: | chr6:44550738-44550509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 39, 120 | 
| Conread position: | 29-258 | 
| Cow position: | chr6:11274561-11274338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 123, 17 | 
| Conread position: | 29-269 | 
| Cow position: | chr6:185431-185186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 26, 54 | 
| Conread position: | 31-261 | 
| Cow position: | chr6:10500654-10500888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 31-269 | 
| Cow position: | chr6:3488063-3487825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 27 | 
| Conread position: | 31-269 | 
| Cow position: | chr6:17597936-17597694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 121, 173 | 
| Conread position: | 37-269 | 
| Cow position: | chr6:186109-185872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 118, 0 | 
| Conread position: | 40-258 | 
| Cow position: | chr6:65821756-65821536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 115, 14 | 
| Conread position: | 45-268 | 
| Cow position: | chr6:51714074-51714298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 88, 11 | 
| Conread position: | 53-220 | 
| Cow position: | chr6:26044926-26045098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 102, 149 | 
| Conread position: | 60-250 | 
| Cow position: | chr6:6475483-6475295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 95, 34 | 
| Conread position: | 69-269 | 
| Cow position: | chr6:914028-914232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 83, 123 | 
| Conread position: | 69-269 | 
| Cow position: | chr6:40973675-40973875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 86, 132 | 
| Conread position: | 71-269 | 
| Cow position: | chr6:40326286-40326086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 84, 12 | 
| Conread position: | 93-266 | 
| Cow position: | chr6:32330105-32329928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 63, 33 | 
| Conread position: | 93-269 | 
| Cow position: | chr6:702328-702510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 93-269 | 
| Cow position: | chr6:28133354-28133537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 59, 136 | 
| Conread position: | 128-269 | 
| Cow position: | chr6:43999518-43999658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 150-269 | 
| Cow position: | chr6:3048788-3048669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 151-266 | 
| Cow position: | chr6:40554100-40553985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 151-269 | 
| Cow position: | chr6:28491086-28490968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 151-269 | 
| Cow position: | chr6:28703840-28703722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
Show alignments to all cow chromosomes.
