Cow genome map
Conread name: | unkn-54-33 |
Conread position: | 6-266 |
Cow position: | chr9:36724759-36725025 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 111 |
Conread position: | 10-270 |
Cow position: | chr9:53702459-53702200 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 176 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 28, 85 |
Conread position: | 11-265 |
Cow position: | chr9:13476618-13476358 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 11-269 |
Cow position: | chr9:222264-222002 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 11 |
Conread position: | 11-269 |
Cow position: | chr9:47002458-47002722 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 11-269 |
Cow position: | chr9:60277754-60277489 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 13-275 |
Cow position: | chr9:42556192-42556463 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 189 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 26, 187 |
Conread position: | 14-182 |
Cow position: | chr9:25023032-25022858 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 138 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-212 |
Cow position: | chr9:6050777-6050575 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 154 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 7, 45 |
Conread position: | 14-225 |
Cow position: | chr9:7003054-7003271 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 171 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-225 |
Cow position: | chr9:7061823-7061606 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 168 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-229 |
Cow position: | chr9:2186237-2186449 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 153 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 138, 44 |
Conread position: | 14-241 |
Cow position: | chr9:44795543-44795769 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 178 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 9, 179 |
Conread position: | 14-257 |
Cow position: | chr9:2171329-2171578 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 186 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 7, 57 |
Conread position: | 14-257 |
Cow position: | chr9:44818450-44818692 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 9 |
Conread position: | 14-258 |
Cow position: | chr9:3005979-3005729 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 14-263 |
Cow position: | chr9:3543110-3543365 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-266 |
Cow position: | chr9:4532763-4533020 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 223 |
Conread position: | 14-266 |
Cow position: | chr9:10322071-10322328 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 209 |
Conread position: | 14-266 |
Cow position: | chr9:34722181-34722428 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 192 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 108, 6 |
Conread position: | 14-266 |
Cow position: | chr9:47545009-47545262 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 174 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 24, 11 |
Conread position: | 14-268 |
Cow position: | chr9:59454995-59454738 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr9:3803609-3803869 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 188 |
Conread position: | 14-269 |
Cow position: | chr9:6830238-6829977 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 6 |
Conread position: | 14-269 |
Cow position: | chr9:9013370-9013628 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 40 |
Conread position: | 14-269 |
Cow position: | chr9:16176039-16176298 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 92 |
Conread position: | 14-269 |
Cow position: | chr9:18509531-18509272 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 161 |
Conread position: | 14-269 |
Cow position: | chr9:22653838-22654099 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr9:27034951-27035209 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr9:28022069-28022331 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 32 |
Conread position: | 14-269 |
Cow position: | chr9:29628478-29628220 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 56 |
Conread position: | 14-269 |
Cow position: | chr9:30672638-30672893 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 88 |
Conread position: | 14-269 |
Cow position: | chr9:31807836-31808097 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr9:37162541-37162287 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 6 |
Conread position: | 14-269 |
Cow position: | chr9:37970939-37970669 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 201 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr9:42309953-42310214 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 14-269 |
Cow position: | chr9:51181918-51181658 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 207 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 62 |
Conread position: | 14-278 |
Cow position: | chr9:29027932-29027667 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 209 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 32 |
Conread position: | 18-269 |
Cow position: | chr9:5514696-5514949 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 193 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 98, 27 |
Conread position: | 20-257 |
Cow position: | chr9:14762171-14761934 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 132, 29 |
Conread position: | 20-269 |
Cow position: | chr9:59173873-59173619 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 20 |
Conread position: | 22-114 |
Cow position: | chr9:163229-163137 (view UCSC Genome Browser custom track) |
Alignm length: | 93 |
Alignm identity: | 78 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-142 |
Cow position: | chr9:25484145-25484265 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 100 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 99, 94 |
Conread position: | 22-142 |
Cow position: | chr9:60651438-60651318 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 99 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-153 |
Cow position: | chr9:16268646-16268777 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 22-174 |
Cow position: | chr9:25754949-25754793 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 127 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 58, 67 |
Conread position: | 22-216 |
Cow position: | chr9:49177553-49177354 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 157 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-258 |
Cow position: | chr9:20308867-20308634 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 174 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 130, 23 |
Conread position: | 22-258 |
Cow position: | chr9:30826955-30827195 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 61 |
Conread position: | 22-258 |
Cow position: | chr9:45873621-45873861 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 7 |
Conread position: | 22-266 |
Cow position: | chr9:130914-130664 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 22-266 |
Cow position: | chr9:64018187-64017938 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr9:1251720-1251471 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 94 |
Conread position: | 22-269 |
Cow position: | chr9:3566561-3566309 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr9:17064113-17063861 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 0 |
Conread position: | 22-269 |
Cow position: | chr9:25035571-25035319 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr9:27934362-27934614 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr9:28440083-28440334 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 98 |
Conread position: | 22-269 |
Cow position: | chr9:28678247-28678499 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr9:31064707-31064959 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 0 |
Conread position: | 22-269 |
Cow position: | chr9:42569181-42569429 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 185 |
Conread position: | 22-269 |
Cow position: | chr9:50790988-50791238 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 174 |
Conread position: | 22-269 |
Cow position: | chr9:51210956-51211208 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 22-269 |
Cow position: | chr9:59426049-59426296 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 189 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 134, 80 |
Conread position: | 22-270 |
Cow position: | chr9:29328930-29329187 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 172 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 17, 241 |
Conread position: | 24-250 |
Cow position: | chr9:1075921-1075690 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 63 |
Conread position: | 24-269 |
Cow position: | chr9:780528-780278 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 25-258 |
Cow position: | chr9:1636230-1636466 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 160 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 128, 92 |
Conread position: | 25-269 |
Cow position: | chr9:1980268-1980517 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 100 |
Conread position: | 25-269 |
Cow position: | chr9:59536379-59536623 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 188 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 130, 19 |
Conread position: | 27-269 |
Cow position: | chr9:2053047-2053282 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 169 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 127, 160 |
Conread position: | 27-269 |
Cow position: | chr9:4282057-4282303 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 169 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 113, 80 |
Conread position: | 27-275 |
Cow position: | chr9:59511669-59511923 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 178 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 124, 19 |
Conread position: | 31-269 |
Cow position: | chr9:32969234-32969477 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 192 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 35-258 |
Cow position: | chr9:25187391-25187621 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 98 |
Conread position: | 40-269 |
Cow position: | chr9:59482506-59482274 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 139 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 115, 72 |
Conread position: | 42-242 |
Cow position: | chr9:5004279-5004482 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 158 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 110, 166 |
Conread position: | 42-265 |
Cow position: | chr9:37095823-37096044 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 156 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 109, 11 |
Conread position: | 42-269 |
Cow position: | chr9:6249594-6249826 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 177 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 42-269 |
Cow position: | chr9:30487868-30488100 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 158 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 113, 0 |
Conread position: | 47-269 |
Cow position: | chr9:64119525-64119744 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 163 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 108, 73 |
Conread position: | 58-269 |
Cow position: | chr9:3998322-3998538 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 97, 0 |
Conread position: | 60-269 |
Cow position: | chr9:4943500-4943286 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 161 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 69-266 |
Cow position: | chr9:9705873-9706073 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 141 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 86, 37 |
Conread position: | 132-269 |
Cow position: | chr9:40223673-40223815 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 110 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 157-263 |
Cow position: | chr9:10936993-10937099 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 169-269 |
Cow position: | chr9:25022742-25022643 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 83 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.