Cow genome map
| Conread name: | unkn-54-33 |
| Conread position: | 3-269 |
| Cow position: | chrX:13076537-13076265 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 3-269 |
| Cow position: | chrX:13097111-13096839 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 6-251 |
| Cow position: | chrX:13397957-13397706 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-252 |
| Cow position: | chrX:15980787-15980541 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 195 |
| Conread position: | 6-269 |
| Cow position: | chrX:8588341-8588610 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-269 |
| Cow position: | chrX:16812432-16812163 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-269 |
| Cow position: | chrX:29911262-29910993 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-270 |
| Cow position: | chrX:14594934-14595204 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 6-279 |
| Cow position: | chrX:1942580-1942303 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 175 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 17, 94 |
| Conread position: | 7-171 |
| Cow position: | chrX:5833267-5833097 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 11-194 |
| Cow position: | chrX:21269864-21269679 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 69, 13 |
| Conread position: | 11-205 |
| Cow position: | chrX:30183721-30183519 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 11-269 |
| Cow position: | chrX:29285613-29285873 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 11-269 |
| Cow position: | chrX:31198615-31198879 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 14-127 |
| Cow position: | chrX:22488359-22488473 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-193 |
| Cow position: | chrX:22130066-22129882 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 10, 122 |
| Conread position: | 14-193 |
| Cow position: | chrX:30056831-30057015 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 9, 173 |
| Conread position: | 14-221 |
| Cow position: | chrX:13053198-13053404 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 7, 91 |
| Conread position: | 14-242 |
| Cow position: | chrX:28634245-28634013 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 33 |
| Conread position: | 14-245 |
| Cow position: | chrX:28871006-28870770 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 7, 188 |
| Conread position: | 14-252 |
| Cow position: | chrX:16237954-16238198 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 109 |
| Conread position: | 14-254 |
| Cow position: | chrX:23391421-23391180 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 187 |
| Conread position: | 14-257 |
| Cow position: | chrX:34553301-34553548 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 61 |
| Conread position: | 14-258 |
| Cow position: | chrX:26767020-26766776 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 190 |
| Conread position: | 14-261 |
| Cow position: | chrX:41851022-41850770 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 174 |
| Conread position: | 14-265 |
| Cow position: | chrX:18534650-18534900 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 9, 65 |
| Conread position: | 14-265 |
| Cow position: | chrX:21058969-21059213 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 9, 49 |
| Conread position: | 14-266 |
| Cow position: | chrX:1547152-1547409 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 191 |
| Conread position: | 14-266 |
| Cow position: | chrX:21589145-21589398 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 9, 187 |
| Conread position: | 14-266 |
| Cow position: | chrX:27495095-27495349 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 212 |
| Conread position: | 14-266 |
| Cow position: | chrX:29793946-29793693 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 180 |
| Conread position: | 14-266 |
| Cow position: | chrX:29950413-29950152 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-268 |
| Cow position: | chrX:13412961-13412699 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-268 |
| Cow position: | chrX:23019501-23019762 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 161 |
| Conread position: | 14-269 |
| Cow position: | chrX:320641-320902 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:970946-971207 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:2482459-2482197 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:3407643-3407385 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 191 |
| Conread position: | 14-269 |
| Cow position: | chrX:5336315-5336054 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:13417250-13416994 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 14-269 |
| Cow position: | chrX:20720161-20720422 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:21223100-21223358 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 32 |
| Conread position: | 14-269 |
| Cow position: | chrX:21579647-21579900 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 14-269 |
| Cow position: | chrX:21829702-21829963 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:22582555-22582305 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 43, 6 |
| Conread position: | 14-269 |
| Cow position: | chrX:26528153-26528410 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 14-269 |
| Cow position: | chrX:29096379-29096640 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 14-269 |
| Cow position: | chrX:30711761-30712021 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 238 |
| Conread position: | 14-269 |
| Cow position: | chrX:37849186-37849445 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 109 |
| Conread position: | 14-269 |
| Cow position: | chrX:40246703-40246447 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 212 |
| Conread position: | 20-265 |
| Cow position: | chrX:15179246-15178997 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 20-269 |
| Cow position: | chrX:30231916-30231666 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 130, 26 |
| Conread position: | 22-124 |
| Cow position: | chrX:29947887-29947989 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-135 |
| Cow position: | chrX:11433881-11433994 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-153 |
| Cow position: | chrX:8454932-8455064 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 22-201 |
| Cow position: | chrX:12803684-12803501 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 22-233 |
| Cow position: | chrX:17478342-17478130 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 22-242 |
| Cow position: | chrX:21490377-21490601 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 179 |
| Conread position: | 22-249 |
| Cow position: | chrX:23214174-23213941 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 40, 201 |
| Conread position: | 22-252 |
| Cow position: | chrX:9008518-9008753 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 22-257 |
| Cow position: | chrX:2102039-2102279 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 61 |
| Conread position: | 22-258 |
| Cow position: | chrX:12280090-12279849 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-258 |
| Cow position: | chrX:20696916-20696678 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 137, 34 |
| Conread position: | 22-258 |
| Cow position: | chrX:22611127-22611367 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 109 |
| Conread position: | 22-258 |
| Cow position: | chrX:32066976-32066741 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 21 |
| Conread position: | 22-258 |
| Cow position: | chrX:44387308-44387544 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 73 |
| Conread position: | 22-260 |
| Cow position: | chrX:2536267-2536023 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 22-263 |
| Cow position: | chrX:28758461-28758207 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 22-265 |
| Cow position: | chrX:5394820-5394573 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-265 |
| Cow position: | chrX:22619128-22618871 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 22-266 |
| Cow position: | chrX:2562677-2562428 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-266 |
| Cow position: | chrX:10417109-10416862 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 107, 9 |
| Conread position: | 22-266 |
| Cow position: | chrX:12288214-12287974 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 22-266 |
| Cow position: | chrX:16699487-16699736 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-266 |
| Cow position: | chrX:18659602-18659356 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 202 |
| Conread position: | 22-266 |
| Cow position: | chrX:22525424-22525175 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-266 |
| Cow position: | chrX:31493600-31493847 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 221 |
| Conread position: | 22-268 |
| Cow position: | chrX:14786703-14786456 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 134, 24 |
| Conread position: | 22-269 |
| Cow position: | chrX:507151-506899 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:1833998-1834250 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:2604228-2604480 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:3375932-3375680 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:3421005-3420758 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 133, 32 |
| Conread position: | 22-269 |
| Cow position: | chrX:5323543-5323293 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 202 |
| Conread position: | 22-269 |
| Cow position: | chrX:5863578-5863826 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 104 |
| Conread position: | 22-269 |
| Cow position: | chrX:6282565-6282321 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 169 |
| Conread position: | 22-269 |
| Cow position: | chrX:6872893-6872641 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:7481812-7482064 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:7752080-7752331 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 22-269 |
| Cow position: | chrX:8479830-8480082 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:10531378-10531126 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:11464822-11464570 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:12343136-12343386 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 51 |
| Conread position: | 22-269 |
| Cow position: | chrX:12353420-12353672 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:12654580-12654330 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 22-269 |
| Cow position: | chrX:16362944-16362692 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:18219577-18219829 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 102 |
| Conread position: | 22-269 |
| Cow position: | chrX:20315882-20315630 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:21304346-21304093 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:21340584-21340832 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 22-269 |
| Cow position: | chrX:24089581-24089834 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 83 |
| Conread position: | 22-269 |
| Cow position: | chrX:26399997-26399749 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 156 |
| Conread position: | 22-269 |
| Cow position: | chrX:26758420-26758171 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 186 |
| Conread position: | 22-269 |
| Cow position: | chrX:27426140-27425888 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:28562034-28561783 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 61 |
| Conread position: | 22-269 |
| Cow position: | chrX:28585160-28585412 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 65 |
| Conread position: | 22-269 |
| Cow position: | chrX:29853382-29853133 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 104 |
| Conread position: | 22-269 |
| Cow position: | chrX:30011219-30011471 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:30055555-30055303 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:35530042-35530294 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:37812341-37812594 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 22-269 |
| Cow position: | chrX:39563751-39563501 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 163 |
| Conread position: | 22-277 |
| Cow position: | chrX:11149137-11148893 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 22-278 |
| Cow position: | chrX:30173491-30173231 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 254 |
| Conread position: | 23-266 |
| Cow position: | chrX:20359870-20359622 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 93 |
| Conread position: | 23-269 |
| Cow position: | chrX:7030367-7030614 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 23-269 |
| Cow position: | chrX:7093779-7094030 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 23-269 |
| Cow position: | chrX:23040939-23040690 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 82 |
| Conread position: | 23-269 |
| Cow position: | chrX:23277207-23277455 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 117 |
| Conread position: | 24-153 |
| Cow position: | chrX:22814578-22814707 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-249 |
| Cow position: | chrX:1689605-1689380 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 25-251 |
| Cow position: | chrX:28553831-28554052 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 25-269 |
| Cow position: | chrX:12459009-12459266 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 39 |
| Conread position: | 25-269 |
| Cow position: | chrX:15127053-15126804 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 28-244 |
| Cow position: | chrX:30178802-30178580 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 28-272 |
| Cow position: | chrX:20797169-20797410 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 125, 12 |
| Conread position: | 29-255 |
| Cow position: | chrX:29885180-29885411 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 29-264 |
| Cow position: | chrX:2143902-2144146 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 35, 27 |
| Conread position: | 29-269 |
| Cow position: | chrX:26427452-26427213 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 148 |
| Conread position: | 30-230 |
| Cow position: | chrX:24484223-24484017 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 33-259 |
| Cow position: | chrX:28651352-28651121 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 35-258 |
| Cow position: | chrX:27987631-27987401 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 38-255 |
| Cow position: | chrX:12182922-12183147 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 10, 145 |
| Conread position: | 40-258 |
| Cow position: | chrX:9125562-9125784 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 40, 49 |
| Conread position: | 40-269 |
| Cow position: | chrX:982860-983094 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 40-271 |
| Cow position: | chrX:23418800-23418564 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 42-266 |
| Cow position: | chrX:17478224-17477996 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 113, 65 |
| Conread position: | 45-269 |
| Cow position: | chrX:31187019-31186792 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 55-266 |
| Cow position: | chrX:5652124-5651910 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 100, 20 |
| Conread position: | 56-239 |
| Cow position: | chrX:34345452-34345638 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 98, 144 |
| Conread position: | 58-269 |
| Cow position: | chrX:41411400-41411616 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 59-269 |
| Cow position: | chrX:27624213-27624428 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 165 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 69-269 |
| Cow position: | chrX:15599198-15599398 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 83, 135 |
| Conread position: | 70-258 |
| Cow position: | chrX:27960783-27960979 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 70-266 |
| Cow position: | chrX:16275878-16276078 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 85, 122 |
| Conread position: | 72-266 |
| Cow position: | chrX:5283547-5283348 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 90-269 |
| Cow position: | chrX:24325327-24325147 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 128 |
| Conread position: | 93-246 |
| Cow position: | chrX:18953517-18953359 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 18 |
| Conread position: | 93-258 |
| Cow position: | chrX:3084869-3084701 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 93-269 |
| Cow position: | chrX:24377292-24377470 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 125 |
| Conread position: | 93-269 |
| Cow position: | chrX:28627386-28627206 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 97-269 |
| Cow position: | chrX:25612022-25612199 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 108-268 |
| Cow position: | chrX:29173495-29173330 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 158-258 |
| Cow position: | chrX:11422195-11422295 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.