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Cow genome map

           
Conread name:
           
unkn-AR078G03iTHYEG03S
        

               
Conread position:
               
1-131
               

               
Cow position:
               
chr13:25453389-25453263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr13:59964-60091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr13:3479963-3479796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
143, 90
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr13:53308717-53308542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
124, 93
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr13:14927458-14927280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:46298422-46298603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 94
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr13:17815990-17815808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:6606802-6606984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:11947509-11947700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
164, 90
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:24539715-24539530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr13:46458841-46458661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
151, 75
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:14544341-14544155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
165, 90
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:15172188-15172373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:25261589-25261772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:52199308-52199124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:55295406-55295585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:58743053-58743251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 58
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr13:60690503-60690689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr13:51856418-51856616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr13:38485050-38484864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
196, 66
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr13:21904881-21904659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
197, 53
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr13:18551667-18551436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:20530922-20531165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 68
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:20536719-20536487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
213, 63
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:54237565-54237337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr13:9884987-9884748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr13:43812303-43812067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr13:43839326-43839562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr13:6975571-6975815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
196, 91
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:3003666-3003403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr13:37945997-37946230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:20041742-20042001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 71
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr13:54093959-54093714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:61170496-61170754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr13:12682322-12682584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr13:20683165-20682901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr13:19178495-19178223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:5091442-5091721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:16270154-16269883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr13:1780052-1779774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 78
               

               
Conread position:
               
1-288
               

               
Cow position:
               
chr13:1011551-1011276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr13:41253834-41253563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
196, 31
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr13:13306325-13306033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 94
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr13:2463010-2463299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr13:16024808-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
196, 41
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr13:37516917-37517206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr13:60436664-60436939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr13:4464226-4463941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
197, 94
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr13:21039379-21039670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 75
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr13:53536086-53536380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
192, 74
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr13:4038099-4037821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr13:60329969-60329680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
304, 75
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr13:46182007-46181712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 12
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr13:61166239-61166534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 48
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr13:11954894-11955204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
186, 68
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr13:34941437-34941737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:1042737-1043068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:9665294-9664958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 125
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr13:18244075-18243761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr13:25531569-25531893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr13:20649764-20650092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:8524403-8524724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 63
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr13:52879631-52879296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr13:8838775-8839100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
305, 75
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr13:17622503-17622173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:15884794-15885139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 106
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr13:43868899-43869231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr13:10845812-10845485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr13:12202584-12202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr13:20563216-20562873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 71
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr13:18989924-18989601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
218, 68
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr13:38277918-38278269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 70
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr13:6153560-6153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr13:45073716-45074037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
219, 63
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr13:12614479-12614129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 68
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr13:31814086-31813747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
305, 66
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr13:35718915-35719266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
187, 78
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr13:43194394-43194040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
196, 84
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr13:13501402-13501748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
6, 17
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr13:12207262-12206919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 74
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr13:20705983-20706337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
196, 93
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr13:37484051-37484411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 86
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr13:40722491-40722839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:32717656-32717995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
305, 66
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:51901831-51901451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 235
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:52285035-52284684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 93
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr13:54344995-54344648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 84
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr13:32949784-32950127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
305, 80
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr13:46311817-46312148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
191, 15
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr13:53566816-53566464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
196, 23
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr13:12990066-12989713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 76
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:15958840-15958477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
20, 16
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:50681590-50681946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr13:15281718-15282077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 15
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr13:34556114-34556457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
305, 86
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr13:45604199-45604559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 93
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr13:55315970-55316340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr13:43184654-43185024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr13:13465571-13465910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr13:20683904-20684275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 12
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr13:56148759-56148373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr13:56160208-56160594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 19
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:17439547-17439919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:23166877-23167250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 75
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:36771206-36771570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:37382029-37381648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 72
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:51821673-51822021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 75
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:52585801-52586187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 90
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr13:60429859-60430230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr13:11096391-11096029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 76
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr13:13176868-13176497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr13:12926010-12925623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 90
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr13:17613565-17613189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr13:46324572-46324943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr13:28683578-28683207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 73
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr13:7663211-7663585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr13:47756593-47756193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
195, 84
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr13:18172559-18172160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
197, 82
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr13:9246933-9246556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr13:18491813-18491422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr13:20570945-20570549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr13:43919036-43919445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr13:47963982-47964352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
197, 47
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr13:23479248-23478847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 61
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr13:25547375-25547768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr13:20666168-20666569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr13:17004373-17004788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 52
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr13:20605900-20606309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 75
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr13:5278970-5279402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr13:44626599-44626169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 125
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr13:24369804-24369385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr13:30026331-30025929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr13:33352148-33352565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
281, 68
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr13:20814061-20814475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 90
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr13:52637501-52637095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
305, 80
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr13:15974829-15974414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr13:59687660-59688067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
197, 82
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr13:34728618-34729048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 70
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:4664643-4665059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:15446265-15445840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
184, 53
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:24586266-24585839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
32, 92
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:44202208-44201800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 88
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr13:15872669-15872227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 91
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr13:21241873-21242286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
305, 71
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr13:36877291-36876855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
211, 75
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr13:27525042-27525470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 90
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:33054176-33054586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 36
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:33256715-33256284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:44323121-44322679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 88
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr13:61976746-61977171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
305, 15
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr13:6079200-6079617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 71
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr13:7076475-7076026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr13:15192675-15193103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:311649-311217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
194, 62
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:9974849-9975283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 90
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:15622026-15621594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:17114161-17114596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
197, 37
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:17291911-17292343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:17821040-17821474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
92, 126
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:17977548-17977127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
305, 68
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:20497871-20497427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:20839786-20839365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 94
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:25695549-25695982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:25817732-25817314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
305, 70
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:41806995-41806561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 35
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:48251773-48252183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
364, 66
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:54418451-54418006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:54702409-54701965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 19
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:5263067-5263495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:8362527-8362963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:9906962-9906513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 125
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:30651394-30650969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 53
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:33875881-33875456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 75
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:34508095-34507679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 70
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:42860351-42860783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
196, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr13:57475200-57475633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 14
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr13:60599723-60600154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
305, 83
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:2774343-2773897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 57
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:12977782-12977359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
305, 30
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:21276074-21275637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:34261451-34261016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 75
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:37985531-37985967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 90
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:41918943-41919380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
217, 49
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:52894363-52893930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:3315455-3315906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 90
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:7059694-7059238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 86
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:17745458-17745040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:19023620-19024072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:25927011-25926566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 78
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr13:32017303-32017736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:9142503-9142055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 61
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:9587364-9587803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:10924689-10925144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 7
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:12448770-12449202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 20
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:13089243-13088811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
197, 84
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:15869338-15868887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:20879616-20880046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 24
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:23960587-23961028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:24754103-24753672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 67
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:30798940-30798489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
197, 55
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:40491452-40490996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:45022989-45023443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:58043848-58043400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr13:60508897-60509346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:1155489-1155927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:2884272-2883835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
305, 51
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:17855593-17855145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:18166949-18166510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:20378117-20378539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:20820621-20821058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:21708400-21707982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
295, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:31581527-31581960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
307, 67
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:54381715-54382146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
305, 75
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr13:61047425-61046984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 30
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr13:18852295-18851863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
197, 89
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr13:57002951-57002498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr13:60966983-60966554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
196, 65
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr13:20270996-20271460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 78
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr13:26479995-26480430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 56
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr13:19882816-19883260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr13:26261575-26262020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr13:34035587-34035142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 92
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr13:16015026-16014573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 70
               

               
Conread position:
               
1-465
               

               
Cow position:
               
chr13:44278574-44278116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr13:42200838-42200384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr13:11061206-11060729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr13:22025483-22025671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 82
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr13:27027549-27027737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr13:15740287-15740081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
186, 89
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr13:13266020-13265774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
196, 30
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr13:5752205-5752484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
162, 70
               

               
Conread position:
               
2-315
               

               
Cow position:
               
chr13:25062628-25062329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
304, 89
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr13:8201269-8201593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 11
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr13:37981534-37981872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
195, 74
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr13:16343904-16343564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
195, 29
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr13:25537859-25537489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 27
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr13:60974296-60973937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
2-387
               

               
Cow position:
               
chr13:25434911-25435279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr13:13261226-13260832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
195, 89
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr13:24155759-24155311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 73
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr13:38012579-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 89
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr13:46516286-46515844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr13:38329848-38329399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 89
               

               
Conread position:
               
2-455
               

               
Cow position:
               
chr13:42114239-42113795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr13:19033764-19033334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 64
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr13:21235467-21235891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
304, 74
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr13:14717120-14717567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
195, 14
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr13:12283056-12282602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
192, 89
               

               
Conread position:
               
2-474
               

               
Cow position:
               
chr13:22115922-22115434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr13:25248927-25249174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr13:11147523-11147283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
193, 83
               

               
Conread position:
               
3-258
               

               
Cow position:
               
chr13:562921-563169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr13:33517707-33517966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
194, 64
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr13:4208597-4208861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
194, 91
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr13:49805192-49804859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
195, 88
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:3015951-3016302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
159, 87
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr13:43762382-43762037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 72
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr13:12546688-12547056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr13:10988853-10989284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 69
               

               
Conread position:
               
3-453
               

               
Cow position:
               
chr13:15041255-15041692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr13:35659970-35659535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 95
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr13:6616531-6616984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 78
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr13:45353263-45352806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 68
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr13:51940948-51940525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 71
               

               
Conread position:
               
3-457
               

               
Cow position:
               
chr13:8202665-8203085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
303, 73
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr13:23269997-23270333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 67
               

               
Conread position:
               
4-367
               

               
Cow position:
               
chr13:8245116-8245468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
188, 90
               

               
Conread position:
               
4-435
               

               
Cow position:
               
chr13:37521516-37521949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr13:2414241-2413880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 70
               

               
Conread position:
               
5-450
               

               
Cow position:
               
chr13:34281895-34281466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 86
               

               
Conread position:
               
6-258
               

               
Cow position:
               
chr13:51108705-51108463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
192, 70
               

               
Conread position:
               
6-308
               

               
Cow position:
               
chr13:42092228-42092506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 31
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr13:32535869-32535555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 61
               

               
Conread position:
               
6-351
               

               
Cow position:
               
chr13:43139010-43139334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 71
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr13:52227886-52228275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
6-445
               

               
Cow position:
               
chr13:53195078-53195485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
228, 63
               

               
Conread position:
               
6-450
               

               
Cow position:
               
chr13:51014966-51015403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 85
               

               
Conread position:
               
6-451
               

               
Cow position:
               
chr13:152165-151754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
300, 59
               

               
Conread position:
               
6-454
               

               
Cow position:
               
chr13:6974374-6973943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 55
               

               
Conread position:
               
6-490
               

               
Cow position:
               
chr13:2192922-2192486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
191, 69
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chr13:19022491-19022055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 61
               

               
Conread position:
               
7-461
               

               
Cow position:
               
chr13:15162452-15162862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 64
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr13:37775014-37775425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
9-333
               

               
Cow position:
               
chr13:29631071-29630755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
10-305
               

               
Cow position:
               
chr13:21155279-21155575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
182, 84
               

               
Conread position:
               
10-454
               

               
Cow position:
               
chr13:32283337-32282908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 42
               

               
Conread position:
               
10-457
               

               
Cow position:
               
chr13:60341024-60340581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 81
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr13:54095015-54094681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
185, 65
               

               
Conread position:
               
13-450
               

               
Cow position:
               
chr13:46525235-46525644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 45
               

               
Conread position:
               
14-336
               

               
Cow position:
               
chr13:9643676-9643992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 77
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr13:15528822-15529151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
182, 77
               

               
Conread position:
               
14-450
               

               
Cow position:
               
chr13:14063318-14063736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
23, 29
               

               
Conread position:
               
14-450
               

               
Cow position:
               
chr13:46112173-46111754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 57
               

               
Conread position:
               
15-457
               

               
Cow position:
               
chr13:22085546-22085954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
183, 61
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr13:9593711-9593370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 40
               

               
Conread position:
               
16-417
               

               
Cow position:
               
chr13:37592734-37593133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 55
               

               
Conread position:
               
16-451
               

               
Cow position:
               
chr13:19223853-19223435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 77
               

               
Conread position:
               
20-426
               

               
Cow position:
               
chr13:24230413-24230018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
20-451
               

               
Cow position:
               
chr13:61188735-61188312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 32
               

               
Conread position:
               
20-453
               

               
Cow position:
               
chr13:1170668-1170240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
100, 49
               

               
Conread position:
               
20-455
               

               
Cow position:
               
chr13:52749288-52749683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 18
               

               
Conread position:
               
20-457
               

               
Cow position:
               
chr13:59170857-59170421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
21-382
               

               
Cow position:
               
chr13:14771661-14771301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
21-392
               

               
Cow position:
               
chr13:26369725-26369362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 55
               

               
Conread position:
               
21-457
               

               
Cow position:
               
chr13:17158672-17159104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 73
               

               
Conread position:
               
22-194
               

               
Cow position:
               
chr13:15947833-15947667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 73
               

               
Conread position:
               
22-313
               

               
Cow position:
               
chr13:62247329-62247050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
174, 52
               

               
Conread position:
               
25-355
               

               
Cow position:
               
chr13:8652242-8652567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 52
               

               
Conread position:
               
25-460
               

               
Cow position:
               
chr13:24715437-24715024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 58
               

               
Conread position:
               
27-194
               

               
Cow position:
               
chr13:22276973-22277131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
28-236
               

               
Cow position:
               
chr13:5079033-5079222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
29-370
               

               
Cow position:
               
chr13:21283515-21283843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 62
               

               
Conread position:
               
29-427
               

               
Cow position:
               
chr13:15991031-15991423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 63
               

               
Conread position:
               
30-285
               

               
Cow position:
               
chr13:61990144-61990388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
167, 61
               

               
Conread position:
               
30-461
               

               
Cow position:
               
chr13:9846264-9846690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
33-382
               

               
Cow position:
               
chr13:2404930-2404611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
273, 54
               

               
Conread position:
               
35-379
               

               
Cow position:
               
chr13:5082839-5082503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
161, 56
               

               
Conread position:
               
36-381
               

               
Cow position:
               
chr13:11644117-11643789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 19
               

               
Conread position:
               
37-248
               

               
Cow position:
               
chr13:21189464-21189257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
160, 54
               

               
Conread position:
               
37-280
               

               
Cow position:
               
chr13:62474616-62474847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
160, 57
               

               
Conread position:
               
37-444
               

               
Cow position:
               
chr13:47186407-47186021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
261, 32
               

               
Conread position:
               
37-454
               

               
Cow position:
               
chr13:55583382-55582974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 54
               

               
Conread position:
               
37-456
               

               
Cow position:
               
chr13:13339047-13338637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 56
               

               
Conread position:
               
38-370
               

               
Cow position:
               
chr13:19188486-19188162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 31
               

               
Conread position:
               
38-454
               

               
Cow position:
               
chr13:49022688-49023085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 53
               

               
Conread position:
               
38-456
               

               
Cow position:
               
chr13:52055414-52055815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 39
               

               
Conread position:
               
39-412
               

               
Cow position:
               
chr13:56605289-56605651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
165, 52
               

               
Conread position:
               
39-448
               

               
Cow position:
               
chr13:5758164-5758545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
40-369
               

               
Cow position:
               
chr13:20231020-20231328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
41-395
               

               
Cow position:
               
chr13:14016385-14016723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
6, 42
               

               
Conread position:
               
42-442
               

               
Cow position:
               
chr13:17338612-17338218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
43-346
               

               
Cow position:
               
chr13:15110501-15110199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 48
               

               
Conread position:
               
43-458
               

               
Cow position:
               
chr13:34375446-34375034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
154, 15
               

               
Conread position:
               
44-454
               

               
Cow position:
               
chr13:20088523-20088937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
44-457
               

               
Cow position:
               
chr13:607085-607485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
50-275
               

               
Cow position:
               
chr13:7790184-7789964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
147, 19
               

               
Conread position:
               
50-409
               

               
Cow position:
               
chr13:4420517-4420153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
54-387
               

               
Cow position:
               
chr13:28689636-28689312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
54-456
               

               
Cow position:
               
chr13:20580075-20579697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
54-462
               

               
Cow position:
               
chr13:45594072-45593695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
252, 12
               

               
Conread position:
               
57-352
               

               
Cow position:
               
chr13:15903180-15902903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
249, 11
               

               
Conread position:
               
57-368
               

               
Cow position:
               
chr13:7488706-7488404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
57-457
               

               
Cow position:
               
chr13:17498398-17497999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
59-448
               

               
Cow position:
               
chr13:54583042-54582661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
62-314
               

               
Cow position:
               
chr13:49507683-49507933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
134, 64
               

               
Conread position:
               
62-416
               

               
Cow position:
               
chr13:39423986-39423643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
142, 33
               

               
Conread position:
               
64-296
               

               
Cow position:
               
chr13:20128825-20128602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
65-466
               

               
Cow position:
               
chr13:45726056-45725640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
132, 14
               

               
Conread position:
               
67-456
               

               
Cow position:
               
chr13:29831272-29831648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 69
               

               
Conread position:
               
68-243
               

               
Cow position:
               
chr13:1339166-1338989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
67, 23
               

               
Conread position:
               
68-279
               

               
Cow position:
               
chr13:36346127-36345920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
68-453
               

               
Cow position:
               
chr13:25604466-25604824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
68-456
               

               
Cow position:
               
chr13:13954232-13954617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
70-279
               

               
Cow position:
               
chr13:41154874-41155080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
70-455
               

               
Cow position:
               
chr13:6849088-6848704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
70-457
               

               
Cow position:
               
chr13:23512528-23512158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
71-454
               

               
Cow position:
               
chr13:18999701-18999312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 53
               

               
Conread position:
               
73-263
               

               
Cow position:
               
chr13:20853723-20853918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
54, 101
               

               
Conread position:
               
73-273
               

               
Cow position:
               
chr13:61162804-61162602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
125, 63
               

               
Conread position:
               
73-353
               

               
Cow position:
               
chr13:38033837-38033555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
73-417
               

               
Cow position:
               
chr13:30662159-30661819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
73-450
               

               
Cow position:
               
chr13:15195049-15195417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
73-454
               

               
Cow position:
               
chr13:20893484-20893862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
73-454
               

               
Cow position:
               
chr13:28139721-28139363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
233, 53
               

               
Conread position:
               
73-455
               

               
Cow position:
               
chr13:19581932-19582301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
73-457
               

               
Cow position:
               
chr13:6931070-6930701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
75-450
               

               
Cow position:
               
chr13:20261173-20261548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
76-450
               

               
Cow position:
               
chr13:26743275-26742910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
77-271
               

               
Cow position:
               
chr13:16711781-16711588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
77-299
               

               
Cow position:
               
chr13:16833919-16834139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
14, 51
               

               
Conread position:
               
77-330
               

               
Cow position:
               
chr13:20180564-20180315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
120, 17
               

               
Conread position:
               
78-449
               

               
Cow position:
               
chr13:18696994-18696609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
78-455
               

               
Cow position:
               
chr13:9800655-9800301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
216, 25
               

               
Conread position:
               
79-358
               

               
Cow position:
               
chr13:47188594-47188311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
79-439
               

               
Cow position:
               
chr13:48598059-48597705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
79-448
               

               
Cow position:
               
chr13:37818602-37818958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
118, 14
               

               
Conread position:
               
79-456
               

               
Cow position:
               
chr13:26150828-26151196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
174, 47
               

               
Conread position:
               
79-461
               

               
Cow position:
               
chr13:867275-866905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
80-349
               

               
Cow position:
               
chr13:17966061-17966328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 46
               

               
Conread position:
               
80-464
               

               
Cow position:
               
chr13:16247805-16247415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
81-379
               

               
Cow position:
               
chr13:49520675-49520971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
81-456
               

               
Cow position:
               
chr13:12875825-12876197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 43
               

               
Conread position:
               
81-456
               

               
Cow position:
               
chr13:17568950-17569318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
9, 54
               

               
Conread position:
               
82-285
               

               
Cow position:
               
chr13:14870675-14870479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
82-456
               

               
Cow position:
               
chr13:15349117-15349468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
299, 18
               

               
Conread position:
               
82-480
               

               
Cow position:
               
chr13:20360416-20360027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 50
               

               
Conread position:
               
83-299
               

               
Cow position:
               
chr13:53070025-53070227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
112, 43
               

               
Conread position:
               
83-416
               

               
Cow position:
               
chr13:54388876-54389202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
113, 27
               

               
Conread position:
               
83-438
               

               
Cow position:
               
chr13:39368100-39367750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
83-442
               

               
Cow position:
               
chr13:13251281-13251619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
170, 30
               

               
Conread position:
               
83-448
               

               
Cow position:
               
chr13:20174895-20174524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
83-448
               

               
Cow position:
               
chr13:52477492-52477858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
22, 32
               

               
Conread position:
               
83-455
               

               
Cow position:
               
chr13:8374627-8374981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
110, 43
               

               
Conread position:
               
83-457
               

               
Cow position:
               
chr13:1363839-1363464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
83-461
               

               
Cow position:
               
chr13:26698352-26698723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 42
               

               
Conread position:
               
87-454
               

               
Cow position:
               
chr13:3160532-3160184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 39
               

               
Conread position:
               
88-370
               

               
Cow position:
               
chr13:51115888-51116162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
88-371
               

               
Cow position:
               
chr13:11321476-11321757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
89-273
               

               
Cow position:
               
chr13:28696220-28696044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
91-197
               

               
Cow position:
               
chr13:20489092-20488981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
91-300
               

               
Cow position:
               
chr13:10098854-10099055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
91-367
               

               
Cow position:
               
chr13:8555600-8555329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-376
               

               
Cow position:
               
chr13:13238714-13238433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-449
               

               
Cow position:
               
chr13:6663614-6663970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-450
               

               
Cow position:
               
chr13:20288466-20288122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
219, 13
               

               
Conread position:
               
91-456
               

               
Cow position:
               
chr13:21269443-21269802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-457
               

               
Cow position:
               
chr13:17451231-17450870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-469
               

               
Cow position:
               
chr13:9900286-9899912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
92-327
               

               
Cow position:
               
chr13:52929845-52929615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
100, 34
               

               
Conread position:
               
92-456
               

               
Cow position:
               
chr13:28552732-28552365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
93-211
               

               
Cow position:
               
chr13:56275135-56275257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
93-211
               

               
Cow position:
               
chr13:56276380-56276256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
93-440
               

               
Cow position:
               
chr13:6441965-6442312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
93-457
               

               
Cow position:
               
chr13:2822994-2822645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
213, 33
               

               
Conread position:
               
94-258
               

               
Cow position:
               
chr13:6113165-6113330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
94-457
               

               
Cow position:
               
chr13:14878818-14879177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
94-457
               

               
Cow position:
               
chr13:25579053-25579412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 30
               

               
Conread position:
               
95-454
               

               
Cow position:
               
chr13:2803601-2803267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 8
               

               
Conread position:
               
100-403
               

               
Cow position:
               
chr13:11591874-11591580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 33
               

               
Conread position:
               
100-436
               

               
Cow position:
               
chr13:18929659-18929324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
100-438
               

               
Cow position:
               
chr13:20217260-20217601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
80, 63
               

               
Conread position:
               
100-444
               

               
Cow position:
               
chr13:11260397-11260068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
100-448
               

               
Cow position:
               
chr13:44003850-44003486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
100-457
               

               
Cow position:
               
chr13:39232704-39233049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
204, 35
               

               
Conread position:
               
101-449
               

               
Cow position:
               
chr13:25381089-25380730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
103-450
               

               
Cow position:
               
chr13:17437743-17438077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
103-457
               

               
Cow position:
               
chr13:18973314-18973672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
104-414
               

               
Cow position:
               
chr13:20248633-20248341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
105-455
               

               
Cow position:
               
chr13:5910773-5911111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
108-359
               

               
Cow position:
               
chr13:21668808-21668571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
158, 18
               

               
Conread position:
               
109-331
               

               
Cow position:
               
chr13:50713321-50713110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
109-451
               

               
Cow position:
               
chr13:54128467-54128814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 151
               

               
Conread position:
               
109-455
               

               
Cow position:
               
chr13:15194613-15194941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
110-456
               

               
Cow position:
               
chr13:27550857-27550514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
110-460
               

               
Cow position:
               
chr13:5060863-5060511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
88, 16
               

               
Conread position:
               
111-370
               

               
Cow position:
               
chr13:13765902-13765651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
113-258
               

               
Cow position:
               
chr13:55947889-55947745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 11
               

               
Conread position:
               
113-436
               

               
Cow position:
               
chr13:8667734-8667414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
114-378
               

               
Cow position:
               
chr13:46736336-46736069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
117-436
               

               
Cow position:
               
chr13:49476199-49475870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
117-456
               

               
Cow position:
               
chr13:10221060-10220736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
189, 9
               

               
Conread position:
               
123-459
               

               
Cow position:
               
chr13:34532821-34533152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
138, 252
               

               
Conread position:
               
124-462
               

               
Cow position:
               
chr13:46044265-46043946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
125-457
               

               
Cow position:
               
chr13:14967109-14967437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 131
               

               
Conread position:
               
126-444
               

               
Cow position:
               
chr13:1569031-1568725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 128
               

               
Conread position:
               
126-456
               

               
Cow position:
               
chr13:620153-620469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
128-263
               

               
Cow position:
               
chr13:322678-322816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
69, 44
               

               
Conread position:
               
128-341
               

               
Cow position:
               
chr13:60389382-60389598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
128-453
               

               
Cow position:
               
chr13:16714156-16714486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 156
               

               
Conread position:
               
128-456
               

               
Cow position:
               
chr13:23141962-23141648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
178, 51
               

               
Conread position:
               
129-387
               

               
Cow position:
               
chr13:49457776-49457529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
177, 10
               

               
Conread position:
               
129-457
               

               
Cow position:
               
chr13:20331325-20330991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
129-470
               

               
Cow position:
               
chr13:20534986-20534664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
177, 56
               

               
Conread position:
               
130-449
               

               
Cow position:
               
chr13:18995231-18994913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 160
               

               
Conread position:
               
130-450
               

               
Cow position:
               
chr13:13533566-13533877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 130
               

               
Conread position:
               
130-481
               

               
Cow position:
               
chr13:18846503-18846147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 126
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr13:46329501-46329772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
131-445
               

               
Cow position:
               
chr13:24693054-24692748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
131-448
               

               
Cow position:
               
chr13:18058143-18058460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 123
               

               
Conread position:
               
131-450
               

               
Cow position:
               
chr13:21280384-21280716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 91
               

               
Conread position:
               
131-451
               

               
Cow position:
               
chr13:21135797-21136128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr13:14576309-14575994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
131-457
               

               
Cow position:
               
chr13:7332897-7333234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 301
               

               
Conread position:
               
132-379
               

               
Cow position:
               
chr13:55728002-55727754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
132-442
               

               
Cow position:
               
chr13:19279194-19278888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
132-453
               

               
Cow position:
               
chr13:39826654-39826338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
52, 47
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr13:16038191-16038502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
132-455
               

               
Cow position:
               
chr13:19240537-19240219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
132-456
               

               
Cow position:
               
chr13:28499966-28500288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
121, 47
               

               
Conread position:
               
132-481
               

               
Cow position:
               
chr13:12770090-12770437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
133-349
               

               
Cow position:
               
chr13:6540207-6540434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 75
               

               
Conread position:
               
133-351
               

               
Cow position:
               
chr13:56678115-56677895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
133-370
               

               
Cow position:
               
chr13:3989304-3989065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
133-451
               

               
Cow position:
               
chr13:15659377-15659059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
134-451
               

               
Cow position:
               
chr13:23522037-23521721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
172, 64
               

               
Conread position:
               
134-454
               

               
Cow position:
               
chr13:21127244-21127560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
134-455
               

               
Cow position:
               
chr13:7312599-7312939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
135-457
               

               
Cow position:
               
chr13:16203767-16203443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
136-256
               

               
Cow position:
               
chr13:13809463-13809587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 90
               

               
Conread position:
               
136-449
               

               
Cow position:
               
chr13:52070913-52070620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
170, 16
               

               
Conread position:
               
136-457
               

               
Cow position:
               
chr13:12245141-12245445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
170, 61
               

               
Conread position:
               
137-434
               

               
Cow position:
               
chr13:19778751-19779054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
5, 81
               

               
Conread position:
               
137-453
               

               
Cow position:
               
chr13:25978094-25978411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
61, 122
               

               
Conread position:
               
139-395
               

               
Cow position:
               
chr13:53553168-53553426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 115
               

               
Conread position:
               
139-453
               

               
Cow position:
               
chr13:28291420-28291102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
140-436
               

               
Cow position:
               
chr13:50750960-50751253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
57, 117
               

               
Conread position:
               
140-450
               

               
Cow position:
               
chr13:56034765-56035072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
141-455
               

               
Cow position:
               
chr13:18197510-18197827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
142-332
               

               
Cow position:
               
chr13:16187806-16187997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
142-455
               

               
Cow position:
               
chr13:57228264-57228569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
164, 56
               

               
Conread position:
               
143-369
               

               
Cow position:
               
chr13:3211642-3211411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
143-437
               

               
Cow position:
               
chr13:20137915-20137615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
144-304
               

               
Cow position:
               
chr13:15964408-15964244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
53, 116
               

               
Conread position:
               
145-434
               

               
Cow position:
               
chr13:20250996-20250702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
147-381
               

               
Cow position:
               
chr13:185618-185380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 108
               

               
Conread position:
               
149-454
               

               
Cow position:
               
chr13:27181115-27180818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 49
               

               
Conread position:
               
149-457
               

               
Cow position:
               
chr13:26120278-26120594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 59
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr13:9385945-9386181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
154-456
               

               
Cow position:
               
chr13:17822871-17823171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
154-457
               

               
Cow position:
               
chr13:14940884-14940573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
163-382
               

               
Cow position:
               
chr13:5006063-5005851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
164-436
               

               
Cow position:
               
chr13:23215088-23214813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 52
               

               
Conread position:
               
164-445
               

               
Cow position:
               
chr13:14034935-14035209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
142, 14
               

               
Conread position:
               
165-450
               

               
Cow position:
               
chr13:11434511-11434789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
141, 52
               

               
Conread position:
               
165-454
               

               
Cow position:
               
chr13:62008181-62007888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
166-427
               

               
Cow position:
               
chr13:5906569-5906830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 51
               

               
Conread position:
               
166-436
               

               
Cow position:
               
chr13:19876261-19876538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 93
               

               
Conread position:
               
166-451
               

               
Cow position:
               
chr13:6861250-6860959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
166-455
               

               
Cow position:
               
chr13:42672354-42672650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 91
               

               
Conread position:
               
169-444
               

               
Cow position:
               
chr13:26100456-26100179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
170-445
               

               
Cow position:
               
chr13:20115317-20115034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
26, 39
               

               
Conread position:
               
172-370
               

               
Cow position:
               
chr13:17838011-17837812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
172-370
               

               
Cow position:
               
chr13:24110548-24110341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 89
               

               
Conread position:
               
172-445
               

               
Cow position:
               
chr13:41157461-41157187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
180-394
               

               
Cow position:
               
chr13:37503527-37503745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
180-455
               

               
Cow position:
               
chr13:50601651-50601926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
180-458
               

               
Cow position:
               
chr13:4974608-4974888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
18, 78
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr13:19174640-19174896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
182-457
               

               
Cow position:
               
chr13:43183300-43183022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
183-349
               

               
Cow position:
               
chr13:31529925-31529759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
184-444
               

               
Cow position:
               
chr13:12673247-12673497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
184-454
               

               
Cow position:
               
chr13:52640900-52641169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
187-456
               

               
Cow position:
               
chr13:34873633-34873363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 66
               

               
Conread position:
               
194-451
               

               
Cow position:
               
chr13:3143285-3143032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr13:12946407-12946151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
112, 23
               

               
Conread position:
               
196-369
               

               
Cow position:
               
chr13:6342055-6342226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
196-387
               

               
Cow position:
               
chr13:53788073-53788264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
196-450
               

               
Cow position:
               
chr13:7149480-7149714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 19
               

               
Conread position:
               
196-454
               

               
Cow position:
               
chr13:38035869-38035620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
196-456
               

               
Cow position:
               
chr13:584838-585095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
196-456
               

               
Cow position:
               
chr13:52459449-52459694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
196-486
               

               
Cow position:
               
chr13:13471380-13471669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 25
               

               
Conread position:
               
198-436
               

               
Cow position:
               
chr13:6926549-6926311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
198-455
               

               
Cow position:
               
chr13:19427671-19427415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 160
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr13:18681316-18681061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 51
               

               
Conread position:
               
202-457
               

               
Cow position:
               
chr13:26720756-26721015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 52
               

               
Conread position:
               
203-453
               

               
Cow position:
               
chr13:12423435-12423184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
204-439
               

               
Cow position:
               
chr13:8408652-8408415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
204-455
               

               
Cow position:
               
chr13:8425480-8425232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
204-457
               

               
Cow position:
               
chr13:18127584-18127830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
205-448
               

               
Cow position:
               
chr13:48409401-48409155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
205-453
               

               
Cow position:
               
chr13:13478651-13478899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
205-454
               

               
Cow position:
               
chr13:14116904-14117168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
205-455
               

               
Cow position:
               
chr13:40541080-40541329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
205-457
               

               
Cow position:
               
chr13:54145451-54145703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
206-455
               

               
Cow position:
               
chr13:21313648-21313897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
208-455
               

               
Cow position:
               
chr13:55765156-55765395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
208-458
               

               
Cow position:
               
chr13:47243530-47243776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
210-445
               

               
Cow position:
               
chr13:2776310-2776074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
214-333
               

               
Cow position:
               
chr13:40493939-40493821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr13:18548719-18548479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
55, 6
               

               
Conread position:
               
217-351
               

               
Cow position:
               
chr13:18517059-18516926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
217-436
               

               
Cow position:
               
chr13:56958982-56958776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
217-453
               

               
Cow position:
               
chr13:271092-270850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
217-453
               

               
Cow position:
               
chr13:23804993-23805240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
217-454
               

               
Cow position:
               
chr13:50582806-50583037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
217-457
               

               
Cow position:
               
chr13:4417126-4416886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chr13:6183406-6183655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
217-461
               

               
Cow position:
               
chr13:15993400-15993158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
218-390
               

               
Cow position:
               
chr13:51813923-51814087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
218-454
               

               
Cow position:
               
chr13:13775231-13775471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
218-454
               

               
Cow position:
               
chr13:21980963-21981189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
218-457
               

               
Cow position:
               
chr13:57436378-57436623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 36
               

               
Conread position:
               
219-456
               

               
Cow position:
               
chr13:14796218-14795985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
220-436
               

               
Cow position:
               
chr13:58149311-58149101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
220-445
               

               
Cow position:
               
chr13:21171559-21171782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
220-445
               

               
Cow position:
               
chr13:42640393-42640170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
220-448
               

               
Cow position:
               
chr13:37614180-37614411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
220-448
               

               
Cow position:
               
chr13:50457869-50457638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
220-449
               

               
Cow position:
               
chr13:24215662-24215891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
55, 33
               

               
Conread position:
               
220-450
               

               
Cow position:
               
chr13:17611541-17611766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
220-453
               

               
Cow position:
               
chr13:37584832-37584599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
220-453
               

               
Cow position:
               
chr13:45439533-45439314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
220-454
               

               
Cow position:
               
chr13:11103182-11103427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
220-454
               

               
Cow position:
               
chr13:11543591-11543342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 243
               

               
Conread position:
               
220-455
               

               
Cow position:
               
chr13:50646624-50646848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr13:15997045-15996815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
221-409
               

               
Cow position:
               
chr13:19750725-19750539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 30
               

               
Conread position:
               
221-444
               

               
Cow position:
               
chr13:51207474-51207697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
221-448
               

               
Cow position:
               
chr13:6980929-6980712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
221-449
               

               
Cow position:
               
chr13:7104664-7104444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 32
               

               
Conread position:
               
221-456
               

               
Cow position:
               
chr13:6486241-6486475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 32
               

               
Conread position:
               
221-456
               

               
Cow position:
               
chr13:21170538-21170307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
56, 32
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr13:41190115-41189879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr13:58333055-58332820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
221-467
               

               
Cow position:
               
chr13:18062161-18061930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
230, 33
               

               
Conread position:
               
221-487
               

               
Cow position:
               
chr13:52934437-52934177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
222-437
               

               
Cow position:
               
chr13:18615393-18615169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
222-450
               

               
Cow position:
               
chr13:14411904-14411676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 37
               

               
Conread position:
               
222-455
               

               
Cow position:
               
chr13:12923883-12923654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
222-467
               

               
Cow position:
               
chr13:20520070-20519837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 29
               

               
Conread position:
               
223-454
               

               
Cow position:
               
chr13:10727372-10727140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
223-454
               

               
Cow position:
               
chr13:25941255-25941480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
224-444
               

               
Cow position:
               
chr13:16908224-16908004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
224-448
               

               
Cow position:
               
chr13:49356042-49356262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
224-455
               

               
Cow position:
               
chr13:28536315-28536541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
225-457
               

               
Cow position:
               
chr13:39376529-39376296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
226-455
               

               
Cow position:
               
chr13:16096583-16096356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
226-456
               

               
Cow position:
               
chr13:55081147-55080917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
227-457
               

               
Cow position:
               
chr13:17813475-17813249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
228-455
               

               
Cow position:
               
chr13:26093625-26093392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
25, 198
               

               
Conread position:
               
229-456
               

               
Cow position:
               
chr13:30315509-30315280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
230-434
               

               
Cow position:
               
chr13:20795209-20795407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
232-439
               

               
Cow position:
               
chr13:33973969-33974176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
233-457
               

               
Cow position:
               
chr13:773354-773134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
236-454
               

               
Cow position:
               
chr13:4790122-4790341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
239-401
               

               
Cow position:
               
chr13:37980766-37980925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
239-456
               

               
Cow position:
               
chr13:9124917-9124707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
240-454
               

               
Cow position:
               
chr13:43787846-43788067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
240-454
               

               
Cow position:
               
chr13:43839685-43839906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
241-456
               

               
Cow position:
               
chr13:22122703-22122488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
241-456
               

               
Cow position:
               
chr13:24160443-24160228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
242-450
               

               
Cow position:
               
chr13:50622823-50623026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
242-453
               

               
Cow position:
               
chr13:24094328-24094535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
242-456
               

               
Cow position:
               
chr13:54236792-54236589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
243-454
               

               
Cow position:
               
chr13:26959811-26960017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
243-457
               

               
Cow position:
               
chr13:7716696-7716912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
247-478
               

               
Cow position:
               
chr13:1539226-1538995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
6, 10
               

               
Conread position:
               
248-455
               

               
Cow position:
               
chr13:17836955-17837157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
58, 131
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr13:47340302-47340102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
249-453
               

               
Cow position:
               
chr13:41115824-41115622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
249-461
               

               
Cow position:
               
chr13:29050972-29051185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
5, 159
               

               
Conread position:
               
250-449
               

               
Cow position:
               
chr13:14210846-14210652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
56, 90
               

               
Conread position:
               
250-454
               

               
Cow position:
               
chr13:23975186-23975384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 7
               

               
Conread position:
               
251-456
               

               
Cow position:
               
chr13:19178158-19177946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
251-456
               

               
Cow position:
               
chr13:20789531-20789740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
251-456
               

               
Cow position:
               
chr13:52177580-52177382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
252-412
               

               
Cow position:
               
chr13:17716534-17716695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
252-448
               

               
Cow position:
               
chr13:11410694-11410495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 118
               

               
Conread position:
               
252-449
               

               
Cow position:
               
chr13:20042285-20042478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
252-450
               

               
Cow position:
               
chr13:49283800-49283994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
54, 106
               

               
Conread position:
               
252-454
               

               
Cow position:
               
chr13:24121753-24121558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 162
               

               
Conread position:
               
252-455
               

               
Cow position:
               
chr13:8637678-8637474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr13:54627468-54627260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 66
               

               
Conread position:
               
253-450
               

               
Cow position:
               
chr13:45499208-45499016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 120
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr13:26044073-26044278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
254-450
               

               
Cow position:
               
chr13:30148585-30148769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
254-455
               

               
Cow position:
               
chr13:37030320-37030130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr13:3153728-3153526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr13:13796833-13797038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
254-459
               

               
Cow position:
               
chr13:21024962-21024759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
52, 32
               

               
Conread position:
               
254-466
               

               
Cow position:
               
chr13:24796856-24796651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
11, 6
               

               
Conread position:
               
255-456
               

               
Cow position:
               
chr13:11569422-11569216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
51, 88
               

               
Conread position:
               
255-457
               

               
Cow position:
               
chr13:17845465-17845262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-460
               

               
Cow position:
               
chr13:369146-369352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
51, 74
               

               
Conread position:
               
255-461
               

               
Cow position:
               
chr13:22046031-22046238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 147
               

               
Conread position:
               
257-454
               

               
Cow position:
               
chr13:21246734-21246931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 191
               

               
Conread position:
               
257-456
               

               
Cow position:
               
chr13:6113551-6113753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-427
               

               
Cow position:
               
chr13:6975871-6976032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
48, 114
               

               
Conread position:
               
258-449
               

               
Cow position:
               
chr13:11147031-11146839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-453
               

               
Cow position:
               
chr13:20110583-20110388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
166, 57
               

               
Conread position:
               
258-453
               

               
Cow position:
               
chr13:42302066-42302260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
258-454
               

               
Cow position:
               
chr13:3149459-3149651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
258-456
               

               
Cow position:
               
chr13:27027924-27028125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
258-457
               

               
Cow position:
               
chr13:1642012-1642210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
258-457
               

               
Cow position:
               
chr13:12768945-12769145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-457
               

               
Cow position:
               
chr13:10511728-10511928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
260-448
               

               
Cow position:
               
chr13:37554902-37555084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
260-450
               

               
Cow position:
               
chr13:5735347-5735147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
260-453
               

               
Cow position:
               
chr13:13504297-13504488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr13:3775709-3775903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 62
               

               
Conread position:
               
261-436
               

               
Cow position:
               
chr13:24371974-24372155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 23
               

               
Conread position:
               
261-450
               

               
Cow position:
               
chr13:25520944-25521139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
261-454
               

               
Cow position:
               
chr13:52464712-52464521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 54
               

               
Conread position:
               
261-455
               

               
Cow position:
               
chr13:11565808-11565618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 105
               

               
Conread position:
               
261-471
               

               
Cow position:
               
chr13:28695831-28695623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 91
               

               
Conread position:
               
262-450
               

               
Cow position:
               
chr13:23685029-23685218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
262-457
               

               
Cow position:
               
chr13:45583818-45584017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
263-431
               

               
Cow position:
               
chr13:16834561-16834732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
263-453
               

               
Cow position:
               
chr13:19180456-19180647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
263-456
               

               
Cow position:
               
chr13:37344767-37344573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
264-436
               

               
Cow position:
               
chr13:8537790-8537617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
264-454
               

               
Cow position:
               
chr13:20367911-20368101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 184
               

               
Conread position:
               
264-456
               

               
Cow position:
               
chr13:28605422-28605615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 185
               

               
Conread position:
               
264-459
               

               
Cow position:
               
chr13:50715117-50714921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
264-476
               

               
Cow position:
               
chr13:7038304-7038092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
265-454
               

               
Cow position:
               
chr13:24107581-24107765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
266-448
               

               
Cow position:
               
chr13:48127074-48126891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
266-456
               

               
Cow position:
               
chr13:16476823-16476633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
40, 181
               

               
Conread position:
               
266-456
               

               
Cow position:
               
chr13:17135247-17135436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
266-472
               

               
Cow position:
               
chr13:10986536-10986746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 17
               

               
Conread position:
               
267-439
               

               
Cow position:
               
chr13:9492736-9492572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 53
               

               
Conread position:
               
267-445
               

               
Cow position:
               
chr13:13781145-13780966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
267-449
               

               
Cow position:
               
chr13:54127866-54128045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
267-454
               

               
Cow position:
               
chr13:28376595-28376781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
267-461
               

               
Cow position:
               
chr13:20156144-20155949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
268-434
               

               
Cow position:
               
chr13:19618781-19618955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
268-453
               

               
Cow position:
               
chr13:48373354-48373533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
268-454
               

               
Cow position:
               
chr13:53357797-53357611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 180
               

               
Conread position:
               
268-455
               

               
Cow position:
               
chr13:16718384-16718575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 183
               

               
Conread position:
               
268-459
               

               
Cow position:
               
chr13:26316922-26317115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
269-457
               

               
Cow position:
               
chr13:46349941-46350129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
270-448
               

               
Cow position:
               
chr13:1339179-1339358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
270-456
               

               
Cow position:
               
chr13:33517994-33518180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
103, 43
               

               
Conread position:
               
270-457
               

               
Cow position:
               
chr13:8367677-8367496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
271-445
               

               
Cow position:
               
chr13:40483020-40483190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
271-454
               

               
Cow position:
               
chr13:2776820-2776637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
273-456
               

               
Cow position:
               
chr13:14544094-14543914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
274-454
               

               
Cow position:
               
chr13:43576972-43576792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 174
               

               
Conread position:
               
275-456
               

               
Cow position:
               
chr13:17624279-17624096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
276-457
               

               
Cow position:
               
chr13:14351538-14351355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 40
               

               
Conread position:
               
277-455
               

               
Cow position:
               
chr13:37946434-37946606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
278-461
               

               
Cow position:
               
chr13:20520268-20520083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
282-451
               

               
Cow position:
               
chr13:6972333-6972164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 122
               

               
Conread position:
               
283-450
               

               
Cow position:
               
chr13:21955116-21955285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
284-450
               

               
Cow position:
               
chr13:19588820-19588653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
286-449
               

               
Cow position:
               
chr13:55007825-55007984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
287-448
               

               
Cow position:
               
chr13:31398404-31398244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 50
               

               
Conread position:
               
287-449
               

               
Cow position:
               
chr13:56019049-56019211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
287-453
               

               
Cow position:
               
chr13:28587797-28587964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
287-454
               

               
Cow position:
               
chr13:17044574-17044407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 161
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr13:5659822-5659986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr13:22729457-22729627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr13:26377471-26377641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
287-457
               

               
Cow position:
               
chr13:6377652-6377481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
287-462
               

               
Cow position:
               
chr13:9551306-9551136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 85
               

               
Conread position:
               
290-456
               

               
Cow position:
               
chr13:53847179-53847340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
293-445
               

               
Cow position:
               
chr13:10055360-10055206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
293-456
               

               
Cow position:
               
chr13:51198750-51198589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
294-437
               

               
Cow position:
               
chr13:11439089-11439226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 83
               

               
Conread position:
               
294-453
               

               
Cow position:
               
chr13:8682393-8682233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
295-456
               

               
Cow position:
               
chr13:43102920-43102760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
297-449
               

               
Cow position:
               
chr13:2529015-2529166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
298-457
               

               
Cow position:
               
chr13:9702392-9702234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
299-449
               

               
Cow position:
               
chr13:15114404-15114253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
305-430
               

               
Cow position:
               
chr13:8423331-8423206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-436
               

               
Cow position:
               
chr13:21070935-21070804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-445
               

               
Cow position:
               
chr13:24591523-24591384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
305-450
               

               
Cow position:
               
chr13:39775558-39775705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
305-455
               

               
Cow position:
               
chr13:6997079-6996934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr13:8230081-8229932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr13:24759405-24759566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
305-457
               

               
Cow position:
               
chr13:3387862-3388014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
305-497
               

               
Cow position:
               
chr13:29507543-29507349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 172
               

               
Conread position:
               
306-455
               

               
Cow position:
               
chr13:242560-242412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
308-457
               

               
Cow position:
               
chr13:27146747-27146598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-454
               

               
Cow position:
               
chr13:19182749-19182889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
310-459
               

               
Cow position:
               
chr13:43577911-43577764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
311-454
               

               
Cow position:
               
chr13:52929356-52929212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
324-456
               

               
Cow position:
               
chr13:21012876-21012744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
325-462
               

               
Cow position:
               
chr13:26482873-26483010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
326-456
               

               
Cow position:
               
chr13:1643978-1644112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
328-449
               

               
Cow position:
               
chr13:18875039-18874918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-456
               

               
Cow position:
               
chr13:20653977-20654083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.