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Cow genome map

           
Conread name:
           
unkn-AR078G03iTHYEG03S
        

               
Conread position:
               
1-131
               

               
Cow position:
               
chr21:17282533-17282655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-133
               

               
Cow position:
               
chr21:28029227-28029355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-141
               

               
Cow position:
               
chr21:18713113-18713245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr21:28919795-28919659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr21:34254452-34254300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr21:35897312-35897463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr21:31159086-31159250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
1-176
               

               
Cow position:
               
chr21:4268703-4268867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr21:34738428-34738620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
129, 71
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr21:45375445-45375632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
70, 79
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr21:9278202-9278392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr21:9998891-9998706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr21:12616969-12617148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr21:33419885-33419712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr21:40065483-40065302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr21:40244264-40244508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr21:912137-911902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr21:18494795-18495036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr21:31676328-31676567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
195, 52
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr21:27743572-27743818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 35
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr21:42905548-42905302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
196, 57
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr21:42913916-42913674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
24, 28
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr21:5137660-5137407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr21:17410829-17410578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
194, 19
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr21:24765113-24765364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 95
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr21:21077160-21077409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
196, 36
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr21:1464058-1464314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr21:8985379-8985636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr21:28443548-28443280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
184, 90
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr21:39450339-39450071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr21:6764872-6764608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr21:17174972-17175239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 71
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr21:20925677-20925411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr21:28998076-28997806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 95
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr21:47802430-47802167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 70
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr21:28993796-28993522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
195, 84
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr21:45866766-45867028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:3813653-3813386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 68
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:7067874-7068149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
92, 78
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:28881972-28882236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr21:32535806-32536074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:31277651-31277910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
116, 27
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr21:3381251-3380976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
195, 8
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr21:4189664-4189943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr21:46829438-46829159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
247, 74
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr21:45439419-45439121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr21:24607215-24607502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
104, 90
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr21:24222708-24222419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
197, 36
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr21:10727110-10727398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr21:13488349-13488659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr21:10601539-10601242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr21:725062-724749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 95
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr21:5636891-5636580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 71
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr21:46143773-46144105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 105
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr21:34391140-34390826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 12
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:16187970-16187657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
196, 19
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr21:35897796-35897476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr21:18845185-18844861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr21:42540390-42540071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
305, 30
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr21:45330778-45330456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr21:20044942-20044610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
132, 11
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr21:41878306-41878626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 41
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr21:5566819-5567147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:30607258-30606917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 74
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:30990439-30990119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
305, 63
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr21:32237127-32237447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
305, 75
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr21:15911230-15911569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 71
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr21:33791538-33791213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr21:8235715-8235389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr21:10514637-10514974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
196, 28
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr21:37345272-37344928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr21:42414273-42413924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 75
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr21:21223119-21223459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
297, 93
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr21:46242410-46242063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:17428333-17428673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
305, 20
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:18828480-18828124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:22353400-22353060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
305, 20
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr21:33210028-33210367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
304, 90
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:395705-396048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:13365174-13365523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
178, 74
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:42348848-42348515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr21:28810433-28810080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 31
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr21:5153447-5153804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr21:1058906-1059262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-368
               

               
Cow position:
               
chr21:26648176-26647830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr21:15976471-15976820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 42
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr21:18790726-18790378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 67
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr21:10151624-10151996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 84
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr21:36297308-36297685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr21:33729264-33729622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
197, 79
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr21:41597645-41598004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 85
               

               
Conread position:
               
1-375
               

               
Cow position:
               
chr21:45473927-45473566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 73
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr21:10118383-10118763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 93
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr21:16696200-16696573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
198, 23
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr21:24796208-24795827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
197, 92
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr21:29484813-29485180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr21:30250379-30250004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr21:42384335-42384709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr21:7564492-7564096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr21:28429279-28429656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr21:19766684-19767068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
195, 58
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr21:4276762-4276381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
304, 86
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr21:8549507-8549899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-401
               

               
Cow position:
               
chr21:28190858-28191250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr21:33562845-33563223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr21:27146162-27145764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 90
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr21:4905142-4904738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr21:19258656-19259042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 80
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr21:47764283-47763891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 71
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr21:36795433-36795830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr21:19615003-19615403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
197, 27
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr21:6623972-6624397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 87
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr21:4080184-4080590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
305, 13
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr21:31253366-31253775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr21:41579579-41579997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 13
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr21:8351474-8351043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 20
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr21:14760410-14760808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
195, 66
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr21:22860831-22861244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr21:11740301-11739866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 138
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr21:29069499-29069070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr21:11645139-11644712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr21:17193930-17193492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:3236360-3236762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
196, 53
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:14464407-14464845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 7
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:20160513-20160937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 65
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:30231872-30231437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:30849109-30848689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 30
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:36756444-36756867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
193, 51
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:41974549-41974108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr21:42135794-42135360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr21:22718951-22718523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr21:23568038-23568488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr21:24296935-24296502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 68
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr21:30592474-30592051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
187, 70
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr21:37479786-37480229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
218, 89
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr21:38449622-38449186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 94
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr21:5971008-5970580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
198, 41
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr21:15445249-15444817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 97
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr21:24094914-24094494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr21:28027633-28028065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 83
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr21:6833882-6834318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-453
               

               
Cow position:
               
chr21:47495827-47495389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
244, 64
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:5898568-5898140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 90
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:17511606-17512042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 51
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:18289492-18289945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
194, 75
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:18568820-18568369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 90
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:19083771-19083317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
66, 91
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:28734082-28733643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 66
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:39888914-39888457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:40133985-40134414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:41155691-41156139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 15
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:41620949-41621395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 66
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr21:49700206-49699768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:4282038-4281614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 74
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:17183752-17184190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 25
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:22194281-22193824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:27124297-27123855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
197, 60
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:27229965-27229534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
105, 75
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:27863690-27863249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:33982979-33982544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 93
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:36762883-36763331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:42500862-42501322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 93
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:45151793-45151355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 66
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr21:47861024-47861451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
195, 77
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:33551-34004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:81900-82330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 126
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:13048367-13047919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:20262504-20262076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
197, 74
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:25344707-25345135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 66
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:29002332-29001875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:34010561-34010124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 63
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:37706577-37706141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 63
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:38900603-38901035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 94
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:38918044-38918473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 74
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr21:40899166-40899612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:6051336-6051777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:8618104-8618533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 76
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:11706922-11706493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:13035218-13034763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:22856044-22856496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:25127438-25127883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
197, 13
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:40786500-40786952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr21:46777143-46776725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
197, 48
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr21:46849293-46848859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr21:3763908-3763477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr21:23586706-23587147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr21:3585528-3585088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 15
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr21:39403709-39403247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
194, 93
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr21:44251996-44251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr21:23672573-23673053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
2-130
               

               
Cow position:
               
chr21:20549081-20548960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr21:13163721-13163889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr21:7716960-7716783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr21:13303650-13303830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr21:48484613-48484417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr21:13409992-13409718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr21:43357430-43357108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 26
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr21:38120938-38121270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
195, 67
               

               
Conread position:
               
2-351
               

               
Cow position:
               
chr21:45915873-45915549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
304, 23
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr21:18780143-18779799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
2-375
               

               
Cow position:
               
chr21:28989443-28989805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
212, 73
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr21:1591379-1591744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 55
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr21:5392712-5392340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 89
               

               
Conread position:
               
2-379
               

               
Cow position:
               
chr21:23322253-23321881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 89
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr21:25382840-25383224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 38
               

               
Conread position:
               
2-382
               

               
Cow position:
               
chr21:13128263-13127899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr21:712764-713161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
9, 74
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr21:10263871-10264298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 73
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr21:23535547-23535976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
2-448
               

               
Cow position:
               
chr21:27569330-27568896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
205, 73
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr21:5426774-5427192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 67
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr21:19958052-19958485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr21:27521497-27521071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 26
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr21:32339906-32339473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr21:41455122-41454665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr21:393853-394049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
3-241
               

               
Cow position:
               
chr21:21143713-21143960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
64, 122
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr21:21480351-21480120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr21:13898020-13898274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr21:6102435-6102164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr21:12961071-12960783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
190, 88
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr21:36163131-36162837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr21:23192686-23192381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
195, 88
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr21:28512364-28512644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
303, 66
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr21:33997390-33997072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr21:4998655-4998334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr21:17475650-17475980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
203, 69
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr21:17709658-17709989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
219, 88
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr21:10000912-10001256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
3-370
               

               
Cow position:
               
chr21:4399631-4399993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
3-391
               

               
Cow position:
               
chr21:21982638-21983014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
195, 95
               

               
Conread position:
               
3-410
               

               
Cow position:
               
chr21:18929529-18929920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
195, 95
               

               
Conread position:
               
3-411
               

               
Cow position:
               
chr21:9416074-9416476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
3-434
               

               
Cow position:
               
chr21:3361183-3360767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
3-445
               

               
Cow position:
               
chr21:23311113-23310694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
269, 23
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr21:44114297-44113866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
199, 10
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr21:42841761-42841311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 73
               

               
Conread position:
               
4-295
               

               
Cow position:
               
chr21:2679385-2679669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
193, 87
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:31662293-31662648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 90
               

               
Conread position:
               
4-476
               

               
Cow position:
               
chr21:12981904-12981445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
192, 38
               

               
Conread position:
               
5-281
               

               
Cow position:
               
chr21:44108841-44109101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
192, 64
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr21:3818050-3818390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
160, 59
               

               
Conread position:
               
5-379
               

               
Cow position:
               
chr21:7582076-7581708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 86
               

               
Conread position:
               
5-462
               

               
Cow position:
               
chr21:28244310-28244744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 9
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr21:2785945-2785696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
191, 74
               

               
Conread position:
               
6-263
               

               
Cow position:
               
chr21:28617425-28617671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr21:43240693-43240966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
189, 88
               

               
Conread position:
               
6-350
               

               
Cow position:
               
chr21:8125966-8125637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
6-369
               

               
Cow position:
               
chr21:18065089-18064731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 81
               

               
Conread position:
               
6-382
               

               
Cow position:
               
chr21:27624547-27624899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
300, 26
               

               
Conread position:
               
6-383
               

               
Cow position:
               
chr21:2927373-2927006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
6-411
               

               
Cow position:
               
chr21:17643138-17642763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 87
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr21:15584575-15584171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 31
               

               
Conread position:
               
6-461
               

               
Cow position:
               
chr21:44826049-44825597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
204, 66
               

               
Conread position:
               
7-382
               

               
Cow position:
               
chr21:26244765-26245114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 59
               

               
Conread position:
               
7-436
               

               
Cow position:
               
chr21:10114493-10114082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 72
               

               
Conread position:
               
7-479
               

               
Cow position:
               
chr21:40589647-40589186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 84
               

               
Conread position:
               
8-414
               

               
Cow position:
               
chr21:10538426-10538016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
54, 72
               

               
Conread position:
               
8-456
               

               
Cow position:
               
chr21:47760612-47761042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 83
               

               
Conread position:
               
9-290
               

               
Cow position:
               
chr21:4795063-4795332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 67
               

               
Conread position:
               
9-336
               

               
Cow position:
               
chr21:39401432-39401744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 63
               

               
Conread position:
               
9-453
               

               
Cow position:
               
chr21:15545533-15545095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
150, 62
               

               
Conread position:
               
9-454
               

               
Cow position:
               
chr21:937878-938289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
208, 10
               

               
Conread position:
               
9-456
               

               
Cow position:
               
chr21:17455222-17455653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
182, 67
               

               
Conread position:
               
10-247
               

               
Cow position:
               
chr21:36793731-36793960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
187, 66
               

               
Conread position:
               
10-456
               

               
Cow position:
               
chr21:13714005-13713566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
179, 67
               

               
Conread position:
               
11-280
               

               
Cow position:
               
chr21:5344495-5344763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
186, 20
               

               
Conread position:
               
11-314
               

               
Cow position:
               
chr21:32454741-32455036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
12-164
               

               
Cow position:
               
chr21:43631362-43631220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr21:17416921-17416542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
181, 79
               

               
Conread position:
               
12-448
               

               
Cow position:
               
chr21:41590716-41590303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
292, 79
               

               
Conread position:
               
13-456
               

               
Cow position:
               
chr21:13840164-13840599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 38
               

               
Conread position:
               
14-448
               

               
Cow position:
               
chr21:18800686-18800267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
234, 55
               

               
Conread position:
               
14-456
               

               
Cow position:
               
chr21:12153978-12154397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 58
               

               
Conread position:
               
15-273
               

               
Cow position:
               
chr21:5455144-5454901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
15-361
               

               
Cow position:
               
chr21:45921215-45920880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
17-382
               

               
Cow position:
               
chr21:24642364-24642710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 48
               

               
Conread position:
               
17-456
               

               
Cow position:
               
chr21:9477004-9477435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
194, 74
               

               
Conread position:
               
20-382
               

               
Cow position:
               
chr21:10633792-10633441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 51
               

               
Conread position:
               
20-387
               

               
Cow position:
               
chr21:10823402-10823763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 67
               

               
Conread position:
               
20-457
               

               
Cow position:
               
chr21:12749376-12748964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 64
               

               
Conread position:
               
22-280
               

               
Cow position:
               
chr21:21769975-21770224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
175, 68
               

               
Conread position:
               
25-290
               

               
Cow position:
               
chr21:18041989-18041740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
173, 41
               

               
Conread position:
               
25-448
               

               
Cow position:
               
chr21:47009386-47008984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
25-455
               

               
Cow position:
               
chr21:10005032-10004614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 66
               

               
Conread position:
               
25-457
               

               
Cow position:
               
chr21:44962648-44963069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
173, 32
               

               
Conread position:
               
27-411
               

               
Cow position:
               
chr21:42007604-42007233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
30-431
               

               
Cow position:
               
chr21:29978903-29978519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 8
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr21:9301067-9301493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
167, 55
               

               
Conread position:
               
30-454
               

               
Cow position:
               
chr21:11027499-11027090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
30-456
               

               
Cow position:
               
chr21:957526-957940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
31-318
               

               
Cow position:
               
chr21:11250725-11251005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 60
               

               
Conread position:
               
31-456
               

               
Cow position:
               
chr21:17637758-17638166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 60
               

               
Conread position:
               
32-454
               

               
Cow position:
               
chr21:6713662-6713255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 22
               

               
Conread position:
               
33-382
               

               
Cow position:
               
chr21:11359899-11360226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 58
               

               
Conread position:
               
33-397
               

               
Cow position:
               
chr21:28923978-28924323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 38
               

               
Conread position:
               
34-448
               

               
Cow position:
               
chr21:20152810-20153220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 53
               

               
Conread position:
               
37-271
               

               
Cow position:
               
chr21:34736896-34737118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
95, 47
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr21:17856409-17856670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
161, 55
               

               
Conread position:
               
37-333
               

               
Cow position:
               
chr21:20418824-20418531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
37-359
               

               
Cow position:
               
chr21:12723022-12723328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
165, 54
               

               
Conread position:
               
37-448
               

               
Cow position:
               
chr21:17875330-17874927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 54
               

               
Conread position:
               
37-455
               

               
Cow position:
               
chr21:20260455-20260026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
37-456
               

               
Cow position:
               
chr21:12462105-12461696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
41-456
               

               
Cow position:
               
chr21:46908-47318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 50
               

               
Conread position:
               
42-436
               

               
Cow position:
               
chr21:34151451-34151827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
43-345
               

               
Cow position:
               
chr21:36789665-36789959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
43-456
               

               
Cow position:
               
chr21:19407718-19407301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
44-350
               

               
Cow position:
               
chr21:13717986-13717697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
45-456
               

               
Cow position:
               
chr21:27810278-27810663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
261, 46
               

               
Conread position:
               
47-370
               

               
Cow position:
               
chr21:8451770-8452094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
142, 44
               

               
Conread position:
               
48-451
               

               
Cow position:
               
chr21:14452113-14452499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
49-456
               

               
Cow position:
               
chr21:27712341-27711963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
257, 42
               

               
Conread position:
               
52-457
               

               
Cow position:
               
chr21:18155693-18155292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
53-454
               

               
Cow position:
               
chr21:23980305-23979910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
57-367
               

               
Cow position:
               
chr21:2657705-2657994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
165, 14
               

               
Conread position:
               
57-370
               

               
Cow position:
               
chr21:25629026-25628722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
59-383
               

               
Cow position:
               
chr21:40168746-40168425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
59-456
               

               
Cow position:
               
chr21:10071054-10070653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
141, 67
               

               
Conread position:
               
60-270
               

               
Cow position:
               
chr21:29224983-29224773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
32, 68
               

               
Conread position:
               
60-276
               

               
Cow position:
               
chr21:34722901-34722695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 31
               

               
Conread position:
               
60-362
               

               
Cow position:
               
chr21:21077486-21077780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
60-457
               

               
Cow position:
               
chr21:41617875-41617467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
36, 176
               

               
Conread position:
               
62-456
               

               
Cow position:
               
chr21:18818391-18817992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
63-280
               

               
Cow position:
               
chr21:13519078-13519287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
64-260
               

               
Cow position:
               
chr21:39809787-39809971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
64-351
               

               
Cow position:
               
chr21:35354422-35354702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 29
               

               
Conread position:
               
65-455
               

               
Cow position:
               
chr21:27668900-27669281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
68-304
               

               
Cow position:
               
chr21:32574611-32574851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
70-332
               

               
Cow position:
               
chr21:32904264-32904005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 56
               

               
Conread position:
               
70-444
               

               
Cow position:
               
chr21:22210353-22209984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 56
               

               
Conread position:
               
71-454
               

               
Cow position:
               
chr21:9698195-9697804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
72-460
               

               
Cow position:
               
chr21:30236924-30236568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
73-448
               

               
Cow position:
               
chr21:12916532-12916155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
73-450
               

               
Cow position:
               
chr21:20032942-20032567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
233, 53
               

               
Conread position:
               
74-379
               

               
Cow position:
               
chr21:3400939-3400635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 87
               

               
Conread position:
               
74-395
               

               
Cow position:
               
chr21:21633406-21633092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 7
               

               
Conread position:
               
75-341
               

               
Cow position:
               
chr21:8527582-8527326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
78-456
               

               
Cow position:
               
chr21:16914672-16915054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
79-423
               

               
Cow position:
               
chr21:10410118-10410461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
79-444
               

               
Cow position:
               
chr21:30835262-30835625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 47
               

               
Conread position:
               
79-449
               

               
Cow position:
               
chr21:2260460-2260084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
118, 24
               

               
Conread position:
               
81-278
               

               
Cow position:
               
chr21:9980062-9979875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
117, 44
               

               
Conread position:
               
81-364
               

               
Cow position:
               
chr21:22465099-22465372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
81-444
               

               
Cow position:
               
chr21:22121424-22121761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
225, 45
               

               
Conread position:
               
82-322
               

               
Cow position:
               
chr21:44515167-44515404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
82-352
               

               
Cow position:
               
chr21:28955413-28955671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
116, 37
               

               
Conread position:
               
83-263
               

               
Cow position:
               
chr21:4568187-4568368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
83-279
               

               
Cow position:
               
chr21:5985414-5985222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
115, 52
               

               
Conread position:
               
83-312
               

               
Cow position:
               
chr21:18414952-18415182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
83-434
               

               
Cow position:
               
chr21:10561682-10561336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 45
               

               
Conread position:
               
83-450
               

               
Cow position:
               
chr21:8206676-8207022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
83-450
               

               
Cow position:
               
chr21:38728067-38728421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
83-453
               

               
Cow position:
               
chr21:10816926-10817302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
88-313
               

               
Cow position:
               
chr21:11198240-11198017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
108, 38
               

               
Conread position:
               
88-451
               

               
Cow position:
               
chr21:19067438-19067799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
89-296
               

               
Cow position:
               
chr21:37014493-37014293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
90-451
               

               
Cow position:
               
chr21:17364565-17364212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
216, 35
               

               
Conread position:
               
91-304
               

               
Cow position:
               
chr21:38664550-38664760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
91-334
               

               
Cow position:
               
chr21:9940282-9940036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
91-374
               

               
Cow position:
               
chr21:17008893-17009172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-453
               

               
Cow position:
               
chr21:37790090-37789733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
107, 26
               

               
Conread position:
               
91-454
               

               
Cow position:
               
chr21:33580325-33580679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
91-458
               

               
Cow position:
               
chr21:6017528-6017904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
91-461
               

               
Cow position:
               
chr21:6997850-6998215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
93-451
               

               
Cow position:
               
chr21:45906707-45906355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
104, 33
               

               
Conread position:
               
93-457
               

               
Cow position:
               
chr21:9036209-9036573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
94-279
               

               
Cow position:
               
chr21:13495455-13495639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
95-436
               

               
Cow position:
               
chr21:41107846-41107525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
98-344
               

               
Cow position:
               
chr21:46140960-46141210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
100, 28
               

               
Conread position:
               
100-385
               

               
Cow position:
               
chr21:25800316-25800602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 26
               

               
Conread position:
               
100-436
               

               
Cow position:
               
chr21:28237793-28237448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
98, 37
               

               
Conread position:
               
100-450
               

               
Cow position:
               
chr21:40432369-40432729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
100-455
               

               
Cow position:
               
chr21:16152352-16152710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
100-456
               

               
Cow position:
               
chr21:47714086-47713736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
100-457
               

               
Cow position:
               
chr21:10858737-10859082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 26
               

               
Conread position:
               
101-402
               

               
Cow position:
               
chr21:27429388-27429668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
102-382
               

               
Cow position:
               
chr21:30256346-30256074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
102-456
               

               
Cow position:
               
chr21:45971250-45970908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 24
               

               
Conread position:
               
103-310
               

               
Cow position:
               
chr21:33360110-33359914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
103-354
               

               
Cow position:
               
chr21:44214048-44214298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
103-360
               

               
Cow position:
               
chr21:46552182-46551924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
103-449
               

               
Cow position:
               
chr21:36909858-36910215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
118, 30
               

               
Conread position:
               
104-478
               

               
Cow position:
               
chr21:7394304-7394661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
108-279
               

               
Cow position:
               
chr21:34727311-34727139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
108-449
               

               
Cow position:
               
chr21:1511220-1511549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 18
               

               
Conread position:
               
108-456
               

               
Cow position:
               
chr21:40266050-40266395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr21:10743320-10743661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
109-457
               

               
Cow position:
               
chr21:24343335-24342993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
111-457
               

               
Cow position:
               
chr21:10423039-10423382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
113-278
               

               
Cow position:
               
chr21:19210648-19210809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
113-448
               

               
Cow position:
               
chr21:17890232-17890566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 10
               

               
Conread position:
               
117-450
               

               
Cow position:
               
chr21:47363806-47363459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
123-401
               

               
Cow position:
               
chr21:17722954-17723232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
124-295
               

               
Cow position:
               
chr21:9302488-9302315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
73, 98
               

               
Conread position:
               
126-402
               

               
Cow position:
               
chr21:977203-976923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
126-453
               

               
Cow position:
               
chr21:48527349-48527683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
127-444
               

               
Cow position:
               
chr21:5464689-5465006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 100
               

               
Conread position:
               
129-449
               

               
Cow position:
               
chr21:41140773-41140451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
64, 90
               

               
Conread position:
               
129-457
               

               
Cow position:
               
chr21:18471533-18471846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
177, 68
               

               
Conread position:
               
129-462
               

               
Cow position:
               
chr21:742231-742553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
130-280
               

               
Cow position:
               
chr21:22720172-22720325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
130-359
               

               
Cow position:
               
chr21:6758292-6758520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
176, 122
               

               
Conread position:
               
130-382
               

               
Cow position:
               
chr21:43259168-43259415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
130-456
               

               
Cow position:
               
chr21:11779584-11779267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
131-296
               

               
Cow position:
               
chr21:46463467-46463632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 86
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr21:34049933-34049661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
131-444
               

               
Cow position:
               
chr21:15544272-15543980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
66, 88
               

               
Conread position:
               
131-445
               

               
Cow position:
               
chr21:8349274-8349582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
131-450
               

               
Cow position:
               
chr21:16604361-16604049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
175, 21
               

               
Conread position:
               
131-457
               

               
Cow position:
               
chr21:16569847-16570161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
52, 99
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr21:868979-868635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 128
               

               
Conread position:
               
132-401
               

               
Cow position:
               
chr21:10978993-10978730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 69
               

               
Conread position:
               
132-416
               

               
Cow position:
               
chr21:7377982-7377692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
132-448
               

               
Cow position:
               
chr21:13656682-13656371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
132-451
               

               
Cow position:
               
chr21:22014132-22014457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
8, 121
               

               
Conread position:
               
132-455
               

               
Cow position:
               
chr21:10673075-10673380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
132-455
               

               
Cow position:
               
chr21:18060009-18059690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
67, 47
               

               
Conread position:
               
133-456
               

               
Cow position:
               
chr21:28919576-28919260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
133-456
               

               
Cow position:
               
chr21:44074656-44074963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
173, 45
               

               
Conread position:
               
133-461
               

               
Cow position:
               
chr21:36910688-36911016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
134-355
               

               
Cow position:
               
chr21:27406304-27406071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
136-370
               

               
Cow position:
               
chr21:2810211-2809975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 42
               

               
Conread position:
               
136-466
               

               
Cow position:
               
chr21:19060136-19059810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
137-455
               

               
Cow position:
               
chr21:9707320-9706997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr21:19513818-19513980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
138-462
               

               
Cow position:
               
chr21:21907476-21907164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
60, 81
               

               
Conread position:
               
139-445
               

               
Cow position:
               
chr21:29014959-29014657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
141-445
               

               
Cow position:
               
chr21:13842444-13842753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
145-358
               

               
Cow position:
               
chr21:471637-471850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
148-456
               

               
Cow position:
               
chr21:10657139-10656831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
50, 115
               

               
Conread position:
               
149-350
               

               
Cow position:
               
chr21:42209667-42209461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
48, 105
               

               
Conread position:
               
150-382
               

               
Cow position:
               
chr21:734560-734789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
5, 70
               

               
Conread position:
               
154-442
               

               
Cow position:
               
chr21:36696121-36695833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
154-456
               

               
Cow position:
               
chr21:17997232-17997518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
155-456
               

               
Cow position:
               
chr21:20165611-20165910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 102
               

               
Conread position:
               
156-464
               

               
Cow position:
               
chr21:8961503-8961204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 101
               

               
Conread position:
               
158-401
               

               
Cow position:
               
chr21:26753469-26753710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
144, 50
               

               
Conread position:
               
162-360
               

               
Cow position:
               
chr21:37235362-37235563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
162-456
               

               
Cow position:
               
chr21:71561-71858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
166-392
               

               
Cow position:
               
chr21:31159384-31159605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 51
               

               
Conread position:
               
166-447
               

               
Cow position:
               
chr21:18318694-18318976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
167-459
               

               
Cow position:
               
chr21:8950162-8950467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
181-456
               

               
Cow position:
               
chr21:8431106-8430826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
184-411
               

               
Cow position:
               
chr21:7768433-7768661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
184-444
               

               
Cow position:
               
chr21:41918247-41917980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
14, 120
               

               
Conread position:
               
184-453
               

               
Cow position:
               
chr21:13588761-13589030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
184-462
               

               
Cow position:
               
chr21:29658282-29658552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
156, 31
               

               
Conread position:
               
186-456
               

               
Cow position:
               
chr21:26018381-26018653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 69
               

               
Conread position:
               
192-369
               

               
Cow position:
               
chr21:8213268-8213094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
114, 60
               

               
Conread position:
               
196-367
               

               
Cow position:
               
chr21:40769306-40769477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 56
               

               
Conread position:
               
196-434
               

               
Cow position:
               
chr21:2550236-2550475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 59
               

               
Conread position:
               
196-457
               

               
Cow position:
               
chr21:10130158-10130419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
197-438
               

               
Cow position:
               
chr21:11625763-11625999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
197-453
               

               
Cow position:
               
chr21:10009802-10009548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
198-456
               

               
Cow position:
               
chr21:8546000-8545748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
199-436
               

               
Cow position:
               
chr21:41287776-41287545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
200-454
               

               
Cow position:
               
chr21:31279278-31279521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
112, 12
               

               
Conread position:
               
202-448
               

               
Cow position:
               
chr21:16793810-16794057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
202-453
               

               
Cow position:
               
chr21:26563138-26562890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
204-456
               

               
Cow position:
               
chr21:19561546-19561293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
205-455
               

               
Cow position:
               
chr21:42144851-42145089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 12
               

               
Conread position:
               
206-457
               

               
Cow position:
               
chr21:11174262-11174516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
208-457
               

               
Cow position:
               
chr21:28792431-28792685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
211-442
               

               
Cow position:
               
chr21:46809742-46809507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
36, 188
               

               
Conread position:
               
212-450
               

               
Cow position:
               
chr21:44592179-44591937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
94, 40
               

               
Conread position:
               
212-457
               

               
Cow position:
               
chr21:13944085-13943845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 43
               

               
Conread position:
               
214-454
               

               
Cow position:
               
chr21:13580444-13580683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
215-382
               

               
Cow position:
               
chr21:17265968-17265802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
215-445
               

               
Cow position:
               
chr21:44829726-44829496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
217-382
               

               
Cow position:
               
chr21:13163894-13164059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 34
               

               
Conread position:
               
217-392
               

               
Cow position:
               
chr21:41139485-41139308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
217-444
               

               
Cow position:
               
chr21:11353097-11353323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
217-445
               

               
Cow position:
               
chr21:39319375-39319150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
217-456
               

               
Cow position:
               
chr21:31652423-31652658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
218-435
               

               
Cow position:
               
chr21:7066345-7066135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chr21:20213740-20213515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
218-449
               

               
Cow position:
               
chr21:41610203-41610443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr21:9278559-9278799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
218-457
               

               
Cow position:
               
chr21:19702767-19703002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
219-454
               

               
Cow position:
               
chr21:21900562-21900327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 109
               

               
Conread position:
               
220-363
               

               
Cow position:
               
chr21:22939805-22939951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 39
               

               
Conread position:
               
220-436
               

               
Cow position:
               
chr21:24266527-24266310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
220-450
               

               
Cow position:
               
chr21:17252940-17252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
220-451
               

               
Cow position:
               
chr21:17519058-17519294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
220-454
               

               
Cow position:
               
chr21:8713921-8713689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr21:27677520-27677753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr21:31760175-31759955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr21:40475538-40475772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
221-416
               

               
Cow position:
               
chr21:28191395-28191580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
221-416
               

               
Cow position:
               
chr21:49276173-49276368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
15, 6
               

               
Conread position:
               
221-445
               

               
Cow position:
               
chr21:24797696-24797915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-450
               

               
Cow position:
               
chr21:41040983-41041213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
221-450
               

               
Cow position:
               
chr21:44724329-44724111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-451
               

               
Cow position:
               
chr21:1562504-1562264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
221-454
               

               
Cow position:
               
chr21:9504905-9505138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr21:15271408-15271167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
38, 147
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr21:35084558-35084322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr21:36023151-36022915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr21:6584098-6583864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
222-448
               

               
Cow position:
               
chr21:12310517-12310736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
222-450
               

               
Cow position:
               
chr21:32393017-32392797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
222-455
               

               
Cow position:
               
chr21:14027102-14027335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
222-456
               

               
Cow position:
               
chr21:16083077-16082842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
222-456
               

               
Cow position:
               
chr21:17403810-17403575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 39
               

               
Conread position:
               
223-459
               

               
Cow position:
               
chr21:17419041-17418808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
224-436
               

               
Cow position:
               
chr21:19161754-19161966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
224-450
               

               
Cow position:
               
chr21:13674610-13674385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
224-456
               

               
Cow position:
               
chr21:31246306-31246544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 94
               

               
Conread position:
               
225-456
               

               
Cow position:
               
chr21:30938629-30938395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
227-455
               

               
Cow position:
               
chr21:19248940-19248717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
230-456
               

               
Cow position:
               
chr21:13303840-13304066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 23
               

               
Conread position:
               
230-457
               

               
Cow position:
               
chr21:18721057-18720833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
76, 17
               

               
Conread position:
               
232-457
               

               
Cow position:
               
chr21:41043269-41043045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
233-455
               

               
Cow position:
               
chr21:37928700-37928921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
233-457
               

               
Cow position:
               
chr21:700741-700517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
233-457
               

               
Cow position:
               
chr21:13817443-13817669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
234-445
               

               
Cow position:
               
chr21:2537087-2536876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
234-456
               

               
Cow position:
               
chr21:30145576-30145361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
234-468
               

               
Cow position:
               
chr21:24875404-24875636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
235-457
               

               
Cow position:
               
chr21:12541346-12541125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 18
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chr21:12322551-12322770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 139
               

               
Conread position:
               
237-458
               

               
Cow position:
               
chr21:26033882-26034103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
238-453
               

               
Cow position:
               
chr21:31659091-31658886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 18
               

               
Conread position:
               
239-457
               

               
Cow position:
               
chr21:13090431-13090649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
241-445
               

               
Cow position:
               
chr21:48482469-48482270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
245-456
               

               
Cow position:
               
chr21:28882241-28882454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr21:745240-745441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
249-457
               

               
Cow position:
               
chr21:8959556-8959765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
57, 94
               

               
Conread position:
               
249-461
               

               
Cow position:
               
chr21:30977190-30976990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
201, 50
               

               
Conread position:
               
250-457
               

               
Cow position:
               
chr21:15869757-15869958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
56, 106
               

               
Conread position:
               
252-434
               

               
Cow position:
               
chr21:17302572-17302755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
252-442
               

               
Cow position:
               
chr21:11743435-11743236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr21:39268870-39269061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
252-449
               

               
Cow position:
               
chr21:42189688-42189496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
252-454
               

               
Cow position:
               
chr21:14830813-14830612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
58, 38
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr21:17531198-17531406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr21:26828902-26828700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr21:34834013-34833808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr21:38482452-38482653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
252-472
               

               
Cow position:
               
chr21:7201218-7201437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
253-450
               

               
Cow position:
               
chr21:12348835-12349033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
253-454
               

               
Cow position:
               
chr21:21940337-21940142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
53, 105
               

               
Conread position:
               
253-454
               

               
Cow position:
               
chr21:36115673-36115875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 195
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr21:14638994-14639198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr21:17842927-17842723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
53, 75
               

               
Conread position:
               
253-457
               

               
Cow position:
               
chr21:26391994-26392199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
253-461
               

               
Cow position:
               
chr21:6291816-6292028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
254-436
               

               
Cow position:
               
chr21:6317616-6317434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 7
               

               
Conread position:
               
254-454
               

               
Cow position:
               
chr21:8986093-8986295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
56, 29
               

               
Conread position:
               
255-439
               

               
Cow position:
               
chr21:14745841-14746026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-442
               

               
Cow position:
               
chr21:18783397-18783209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 116
               

               
Conread position:
               
255-456
               

               
Cow position:
               
chr21:34737238-34737432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
255-457
               

               
Cow position:
               
chr21:10587415-10587212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-457
               

               
Cow position:
               
chr21:22211325-22211528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-461
               

               
Cow position:
               
chr21:874393-874602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
258-416
               

               
Cow position:
               
chr21:12640545-12640704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
258-449
               

               
Cow position:
               
chr21:24350927-24351115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 44
               

               
Conread position:
               
258-451
               

               
Cow position:
               
chr21:32648114-32647922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
48, 187
               

               
Conread position:
               
258-451
               

               
Cow position:
               
chr21:43316820-43316626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-455
               

               
Cow position:
               
chr21:10138010-10138211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-455
               

               
Cow position:
               
chr21:13985661-13985859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-456
               

               
Cow position:
               
chr21:5218777-5218977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 107
               

               
Conread position:
               
258-457
               

               
Cow position:
               
chr21:20193045-20193245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
259-437
               

               
Cow position:
               
chr21:19826294-19826473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
259-449
               

               
Cow position:
               
chr21:15305223-15305031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
259-454
               

               
Cow position:
               
chr21:18449829-18450023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
260-437
               

               
Cow position:
               
chr21:8494717-8494895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
260-455
               

               
Cow position:
               
chr21:24757018-24757207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
261-454
               

               
Cow position:
               
chr21:7539450-7539259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 175
               

               
Conread position:
               
261-456
               

               
Cow position:
               
chr21:39278219-39278021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
262-444
               

               
Cow position:
               
chr21:30970014-30970194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 96
               

               
Conread position:
               
262-456
               

               
Cow position:
               
chr21:10660814-10660619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 156
               

               
Conread position:
               
262-457
               

               
Cow position:
               
chr21:9259892-9259696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
263-448
               

               
Cow position:
               
chr21:11006691-11006505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
263-448
               

               
Cow position:
               
chr21:40457681-40457871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
263-451
               

               
Cow position:
               
chr21:27744105-27744295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
263-454
               

               
Cow position:
               
chr21:3177927-3178114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
263-455
               

               
Cow position:
               
chr21:10624853-10624661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
264-456
               

               
Cow position:
               
chr21:16796932-16797122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
42, 156
               

               
Conread position:
               
265-454
               

               
Cow position:
               
chr21:19220716-19220527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 183
               

               
Conread position:
               
266-454
               

               
Cow position:
               
chr21:1464426-1464611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
40, 153
               

               
Conread position:
               
267-454
               

               
Cow position:
               
chr21:22525098-22524911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 181
               

               
Conread position:
               
268-457
               

               
Cow position:
               
chr21:31278268-31278460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
270-444
               

               
Cow position:
               
chr21:37495859-37495684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
270-457
               

               
Cow position:
               
chr21:13134688-13134868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
37, 17
               

               
Conread position:
               
273-445
               

               
Cow position:
               
chr21:6391431-6391602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
273-445
               

               
Cow position:
               
chr21:7460697-7460865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
33, 85
               

               
Conread position:
               
273-451
               

               
Cow position:
               
chr21:58540-58713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
273-454
               

               
Cow position:
               
chr21:29011880-29011707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
277-456
               

               
Cow position:
               
chr21:45446629-45446808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
279-456
               

               
Cow position:
               
chr21:45537280-45537461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
281-444
               

               
Cow position:
               
chr21:32536494-32536650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
282-456
               

               
Cow position:
               
chr21:19394784-19394609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
287-453
               

               
Cow position:
               
chr21:48205117-48204951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 161
               

               
Conread position:
               
287-456
               

               
Cow position:
               
chr21:42047938-42047769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 133
               

               
Conread position:
               
288-457
               

               
Cow position:
               
chr21:5344983-5345153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
293-436
               

               
Cow position:
               
chr21:31258576-31258720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
293-459
               

               
Cow position:
               
chr21:24061085-24060918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr21:19340117-19339960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
303-454
               

               
Cow position:
               
chr21:48242935-48242779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
307-456
               

               
Cow position:
               
chr21:16099440-16099290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
65, 142
               

               
Conread position:
               
307-457
               

               
Cow position:
               
chr21:30794301-30794151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
308-456
               

               
Cow position:
               
chr21:7535420-7535279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
309-435
               

               
Cow position:
               
chr21:47784719-47784845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-456
               

               
Cow position:
               
chr21:34209889-34209744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
313-456
               

               
Cow position:
               
chr21:30359216-30359079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
321-438
               

               
Cow position:
               
chr21:17929489-17929371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
321-456
               

               
Cow position:
               
chr21:42227560-42227426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
325-456
               

               
Cow position:
               
chr21:12293164-12293295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
75, 94
               
Show alignments to all cow chromosomes.