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Cow genome map

           
Conread name:
           
unkn-AR078G03iTHYEG03S
        

               
Conread position:
               
1-135
               

               
Cow position:
               
chr9:42956624-42956494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr9:33067310-33067167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
102, 125
               

               
Conread position:
               
1-147
               

               
Cow position:
               
chr9:32787844-32787979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 83
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr9:34762587-34762730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr9:40060064-40060230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr9:35101130-35100961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr9:27052070-27052253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr9:5621767-5621951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr9:3594263-3594448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr9:8600599-8600411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr9:8612550-8612364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:8546581-8546402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:10877603-10877790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:30664515-30664702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
151, 90
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:41653052-41652867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:42585363-42585549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
173, 42
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:48343865-48343683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr9:53608131-53608313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr9:20318814-20319000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 68
               

               
Conread position:
               
1-213
               

               
Cow position:
               
chr9:41995977-41995769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr9:9491056-9490844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
194, 57
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr9:36623189-36623407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr9:42998208-42998431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
154, 44
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr9:1984259-1984485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr9:16182227-16182457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
195, 70
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr9:4928894-4928655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr9:32812611-32812377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr9:35305857-35306090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
197, 76
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr9:58439518-58439754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
196, 80
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr9:22227823-22228058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
245, 67
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr9:18002686-18002937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 66
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr9:27076988-27077226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr9:36999798-37000045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
197, 70
               

               
Conread position:
               
1-260
               

               
Cow position:
               
chr9:57951066-57951305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
184, 68
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr9:53602676-53602440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr9:64516833-64517088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
197, 30
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr9:17785198-17785444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
183, 90
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr9:20738965-20738707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr9:59172115-59172371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
153, 53
               

               
Conread position:
               
1-270
               

               
Cow position:
               
chr9:20989191-20989444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr9:30749322-30749587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr9:40105740-40105469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 90
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr9:54997760-54998027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
178, 90
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr9:58669643-58669378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
196, 15
               

               
Conread position:
               
1-279
               

               
Cow position:
               
chr9:4128521-4128784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr9:5532216-5531938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr9:49983429-49983693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr9:26391031-26390764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr9:38344157-38343879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr9:22361277-22360990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
196, 13
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr9:35533688-35533976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 88
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr9:6225189-6225478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 82
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr9:54610968-54611260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr9:1952006-1952295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr9:3411033-3410757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr9:5442255-5441961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
113, 36
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr9:9416144-9416423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr9:47875684-47875994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr9:35850162-35849867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 75
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr9:47472959-47472647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
184, 77
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr9:16745940-16745633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
195, 37
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr9:41789541-41789244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 28
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr9:35203147-35202833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
195, 84
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr9:22114370-22114686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
196, 96
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr9:35904488-35904798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr9:24873112-24872778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:1950182-1949856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 42
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:8534420-8534751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr9:24997253-24997578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 35
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr9:5161803-5162114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
304, 75
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr9:6089360-6089019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
1-347
               

               
Cow position:
               
chr9:32371497-32371823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 45
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr9:44914832-44915171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr9:23430879-23431222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 73
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr9:5509987-5509650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 92
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr9:6880033-6879703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr9:58133760-58134090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
333, 7
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr9:5319892-5319543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr9:5226901-5227255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr9:59795017-59795374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 39
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr9:7363290-7362945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 80
               

               
Conread position:
               
1-358
               

               
Cow position:
               
chr9:52001270-52000936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
305, 20
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr9:5763367-5763714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr9:38961175-38961512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr9:34310297-34309944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
196, 93
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr9:50076329-50075978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 123
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr9:5218916-5219259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
192, 64
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr9:34468330-34468665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
186, 30
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr9:32732423-32732767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 78
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr9:43871235-43870887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 53
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr9:55084034-55084389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr9:7634530-7634182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
197, 65
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr9:19714332-19713990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 61
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr9:10127405-10127759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr9:40542377-40542042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
195, 63
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr9:10308744-10309091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr9:11068206-11068574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr9:21888432-21888073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr9:44467086-44467435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 90
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr9:61997332-61997698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 90
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr9:64050292-64050656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 74
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr9:5501114-5500755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr9:49982834-49983187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:31078822-31079178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 14
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr9:60110496-60110151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
305, 65
               

               
Conread position:
               
1-377
               

               
Cow position:
               
chr9:55074872-55075231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 70
               

               
Conread position:
               
1-379
               

               
Cow position:
               
chr9:64155593-64155951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 90
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr9:39681619-39681234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr9:62442545-62442184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
196, 24
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:1520468-1520846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 13
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:8288880-8288511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:17310299-17310669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:22696480-22696116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:36445885-36445507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 39
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:37069306-37069663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 84
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr9:50080783-50081147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 68
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr9:64559624-64559993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr9:9199521-9199892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 68
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr9:17740681-17741058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr9:48106856-48107228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
1-396
               

               
Cow position:
               
chr9:11192905-11193288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 24
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr9:7410045-7409637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr9:9443334-9443744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr9:41513882-41513504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr9:24726415-24726806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
260, 75
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr9:31077415-31077812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
235, 75
               

               
Conread position:
               
1-427
               

               
Cow position:
               
chr9:23388415-23388829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
196, 68
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr9:29006823-29006406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 56
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr9:55287628-55288045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
1-435
               

               
Cow position:
               
chr9:3070160-3070574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr9:10011063-10010654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 74
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr9:29184870-29185298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
1-436
               

               
Cow position:
               
chr9:34957788-34958210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr9:31347217-31346790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr9:16300308-16300735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr9:22443348-22443784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 220
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr9:9723619-9724043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 48
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr9:18381122-18380704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 78
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr9:33218689-33219121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr9:9753133-9753568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 13
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr9:28726463-28726895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 25
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr9:35167431-35167003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr9:42498092-42497662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr9:17871844-17872274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-445
               

               
Cow position:
               
chr9:33940870-33940430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 70
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr9:15215418-15215860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr9:26057185-26057599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr9:50606690-50607100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 76
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr9:51566224-51566668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 24
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr9:56032065-56032487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 57
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr9:20942348-20942790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr9:45285268-45285710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-449
               

               
Cow position:
               
chr9:61846887-61847286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
305, 68
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:1751597-1751157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:3387953-3387544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:9461392-9461839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 70
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:34901852-34902269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 50
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:41283289-41282840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:49764919-49764473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 75
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr9:54677485-54677085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
305, 50
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:7866328-7865898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 19
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:8997819-8997384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:17634568-17634998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
218, 92
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:20406901-20406482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:38793282-38792842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 72
               

               
Conread position:
               
1-451
               

               
Cow position:
               
chr9:55256285-55256722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:13670899-13670460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 93
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:20681144-20681578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
187, 47
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:29825293-29824840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
196, 19
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:31124660-31125103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
194, 75
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:34697032-34697478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 80
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:44710085-44709658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 27
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr9:63784661-63785085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr9:11299434-11299849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
197, 24
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr9:18252660-18253098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 86
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr9:19539360-19538923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 90
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr9:22151824-22152259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-455
               

               
Cow position:
               
chr9:26404052-26403617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:5393314-5392895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:8998618-8998175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 57
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:14974663-14975108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:15805658-15806104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:20900867-20901296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 56
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:22318601-22318183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 74
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:23541155-23541578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
341, 70
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:26278910-26279349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 95
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:28747259-28747698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 76
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:33598244-33597796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 70
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:34287057-34286618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 50
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:37017147-37016724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 75
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:50976983-50977434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 68
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:51620699-51620266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 68
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:52407433-52406992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:52484654-52485092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 75
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr9:54681765-54681343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 67
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:9552350-9551909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:15982816-15983254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 19
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:20321853-20322271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 69
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:21030579-21030125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 83
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:25964561-25965019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 86
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:36490632-36491083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
196, 63
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:38184215-38184642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
305, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:41416614-41416151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 68
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:43207116-43207557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 37
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:52505040-52505485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 90
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:52689361-52689793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 83
               

               
Conread position:
               
1-457
               

               
Cow position:
               
chr9:53257797-53258235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 68
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr9:47906026-47906468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr9:648038-647595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 25
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr9:13994451-13993976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 79
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr9:20848199-20847762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 93
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr9:30402157-30402614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 68
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr9:17799913-17799451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr9:20091301-20090860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
262, 24
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr9:30138389-30137917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 82
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr9:28983444-28982961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
2-177
               

               
Cow position:
               
chr9:31662732-31662564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
2-269
               

               
Cow position:
               
chr9:29034777-29035029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
194, 67
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr9:34919004-34919258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr9:30162424-30162128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr9:35375686-35375375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 72
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr9:29684409-29684074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
195, 62
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr9:58204928-58204593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
304, 85
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr9:4861654-4861296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
157, 92
               

               
Conread position:
               
2-395
               

               
Cow position:
               
chr9:824217-823842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
186, 62
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr9:44831792-44832171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 73
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr9:28391768-28392158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr9:42445720-42446128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 77
               

               
Conread position:
               
2-434
               

               
Cow position:
               
chr9:38846087-38846497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 89
               

               
Conread position:
               
2-435
               

               
Cow position:
               
chr9:8724059-8723638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr9:61739179-61738760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 53
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr9:48564357-48563911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 129
               

               
Conread position:
               
2-449
               

               
Cow position:
               
chr9:24887462-24887034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 36
               

               
Conread position:
               
2-450
               

               
Cow position:
               
chr9:31640055-31640499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
2-454
               

               
Cow position:
               
chr9:34374667-34375103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
304, 53
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr9:9573596-9573142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 18
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr9:21459895-21460331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
177, 61
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr9:9595692-9596129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 89
               

               
Conread position:
               
2-457
               

               
Cow position:
               
chr9:63905342-63905794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
304, 89
               

               
Conread position:
               
2-462
               

               
Cow position:
               
chr9:10144210-10144667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
195, 89
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr9:26310819-26310635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
176, 91
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr9:214201-214517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 93
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr9:44553008-44552690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr9:63746065-63745731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 73
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr9:17410924-17411297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 6
               

               
Conread position:
               
3-397
               

               
Cow position:
               
chr9:54528776-54528391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
3-437
               

               
Cow position:
               
chr9:54716361-54716776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
303, 22
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr9:26086328-26085891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 88
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr9:44822041-44822498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 69
               

               
Conread position:
               
3-454
               

               
Cow position:
               
chr9:47869268-47868849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr9:5433896-5433468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 68
               

               
Conread position:
               
3-455
               

               
Cow position:
               
chr9:32676947-32676500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 88
               

               
Conread position:
               
3-456
               

               
Cow position:
               
chr9:20318317-20318752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 66
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr9:38875314-38875495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr9:29808724-29808422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
175, 66
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr9:17929032-17928699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 70
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr9:39577994-39577678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 67
               

               
Conread position:
               
4-444
               

               
Cow position:
               
chr9:55118338-55117916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 34
               

               
Conread position:
               
4-456
               

               
Cow position:
               
chr9:31626409-31625953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 87
               

               
Conread position:
               
5-296
               

               
Cow position:
               
chr9:1997391-1997115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
174, 29
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr9:8563100-8562715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 16
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr9:18215650-18216050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 64
               

               
Conread position:
               
6-366
               

               
Cow position:
               
chr9:5209841-5209492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
192, 10
               

               
Conread position:
               
6-373
               

               
Cow position:
               
chr9:33681942-33681561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
149, 53
               

               
Conread position:
               
6-453
               

               
Cow position:
               
chr9:58979659-58979229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 85
               

               
Conread position:
               
6-457
               

               
Cow position:
               
chr9:5327512-5327083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 70
               

               
Conread position:
               
7-382
               

               
Cow position:
               
chr9:3782620-3782265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
299, 55
               

               
Conread position:
               
8-413
               

               
Cow position:
               
chr9:3186396-3185994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
8-456
               

               
Cow position:
               
chr9:6840267-6839819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 83
               

               
Conread position:
               
9-260
               

               
Cow position:
               
chr9:34000361-34000604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
188, 62
               

               
Conread position:
               
10-382
               

               
Cow position:
               
chr9:59386523-59386874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 61
               

               
Conread position:
               
10-393
               

               
Cow position:
               
chr9:51204979-51204614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
75, 85
               

               
Conread position:
               
10-416
               

               
Cow position:
               
chr9:20416255-20416652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
10-450
               

               
Cow position:
               
chr9:32306982-32307406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 62
               

               
Conread position:
               
10-454
               

               
Cow position:
               
chr9:48118448-48118852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 54
               

               
Conread position:
               
11-272
               

               
Cow position:
               
chr9:10092140-10092390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
11-364
               

               
Cow position:
               
chr9:31814125-31814475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 60
               

               
Conread position:
               
11-451
               

               
Cow position:
               
chr9:13169415-13169838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
187, 57
               

               
Conread position:
               
13-456
               

               
Cow position:
               
chr9:61544900-61544486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr9:28735728-28735464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
14-370
               

               
Cow position:
               
chr9:18216850-18217194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 77
               

               
Conread position:
               
15-416
               

               
Cow position:
               
chr9:33119633-33120029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 76
               

               
Conread position:
               
16-256
               

               
Cow position:
               
chr9:25657762-25657527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
180, 56
               

               
Conread position:
               
17-387
               

               
Cow position:
               
chr9:61493274-61492920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
289, 74
               

               
Conread position:
               
19-401
               

               
Cow position:
               
chr9:1729431-1729800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 52
               

               
Conread position:
               
20-312
               

               
Cow position:
               
chr9:766906-767188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr9:388771-389103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
176, 62
               

               
Conread position:
               
20-453
               

               
Cow position:
               
chr9:62859919-62859507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
233, 39
               

               
Conread position:
               
20-455
               

               
Cow position:
               
chr9:32815882-32815475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
286, 71
               

               
Conread position:
               
20-456
               

               
Cow position:
               
chr9:46980987-46981400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 22
               

               
Conread position:
               
20-457
               

               
Cow position:
               
chr9:49710088-49709658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr9:40604193-40603957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
176, 68
               

               
Conread position:
               
24-299
               

               
Cow position:
               
chr9:15006511-15006773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
186, 70
               

               
Conread position:
               
28-290
               

               
Cow position:
               
chr9:50702876-50703125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
28-402
               

               
Cow position:
               
chr9:11319396-11319762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 39
               

               
Conread position:
               
28-411
               

               
Cow position:
               
chr9:56011733-56011370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 63
               

               
Conread position:
               
28-456
               

               
Cow position:
               
chr9:29092040-29091594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 63
               

               
Conread position:
               
29-361
               

               
Cow position:
               
chr9:15225055-15225382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 70
               

               
Conread position:
               
29-456
               

               
Cow position:
               
chr9:52131253-52130834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
30-457
               

               
Cow position:
               
chr9:52619886-52619467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
174, 51
               

               
Conread position:
               
31-370
               

               
Cow position:
               
chr9:4267747-4268077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 60
               

               
Conread position:
               
32-370
               

               
Cow position:
               
chr9:11313275-11313609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
32-457
               

               
Cow position:
               
chr9:43623492-43623086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 59
               

               
Conread position:
               
33-283
               

               
Cow position:
               
chr9:32711163-32710922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
20, 61
               

               
Conread position:
               
33-288
               

               
Cow position:
               
chr9:33038227-33038473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
162, 61
               

               
Conread position:
               
33-445
               

               
Cow position:
               
chr9:53138888-53139302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 97
               

               
Conread position:
               
33-449
               

               
Cow position:
               
chr9:56087836-56088249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
151, 58
               

               
Conread position:
               
33-454
               

               
Cow position:
               
chr9:40302894-40303310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
165, 58
               

               
Conread position:
               
34-457
               

               
Cow position:
               
chr9:6339032-6338614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 57
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr9:3371808-3371560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
91, 61
               

               
Conread position:
               
36-456
               

               
Cow position:
               
chr9:30477556-30477950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 35
               

               
Conread position:
               
36-464
               

               
Cow position:
               
chr9:1532104-1532503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
226, 55
               

               
Conread position:
               
37-358
               

               
Cow position:
               
chr9:58972264-58972577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
159, 54
               

               
Conread position:
               
37-454
               

               
Cow position:
               
chr9:53762928-53762524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
158, 54
               

               
Conread position:
               
37-467
               

               
Cow position:
               
chr9:36410125-36410540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 39
               

               
Conread position:
               
38-247
               

               
Cow position:
               
chr9:50667650-50667449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
38-269
               

               
Cow position:
               
chr9:58734601-58734373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
38-364
               

               
Cow position:
               
chr9:1973169-1972859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
6, 50
               

               
Conread position:
               
38-456
               

               
Cow position:
               
chr9:27279544-27279129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 89
               

               
Conread position:
               
41-456
               

               
Cow position:
               
chr9:43048403-43048795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
306, 35
               

               
Conread position:
               
42-435
               

               
Cow position:
               
chr9:64106129-64105746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
42-454
               

               
Cow position:
               
chr9:42264443-42264046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 49
               

               
Conread position:
               
42-457
               

               
Cow position:
               
chr9:42062338-42061914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
43-374
               

               
Cow position:
               
chr9:28354739-28354418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 29
               

               
Conread position:
               
43-456
               

               
Cow position:
               
chr9:62724767-62724366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
154, 19
               

               
Conread position:
               
44-296
               

               
Cow position:
               
chr9:26115678-26115924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
44-318
               

               
Cow position:
               
chr9:53211277-53211534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
157, 37
               

               
Conread position:
               
44-413
               

               
Cow position:
               
chr9:44833745-44834100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
44-451
               

               
Cow position:
               
chr9:26440576-26440987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
154, 35
               

               
Conread position:
               
45-263
               

               
Cow position:
               
chr9:6117928-6118136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
46-399
               

               
Cow position:
               
chr9:43444013-43443679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
260, 45
               

               
Conread position:
               
48-247
               

               
Cow position:
               
chr9:51011324-51011508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
48-382
               

               
Cow position:
               
chr9:33093170-33092851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
149, 18
               

               
Conread position:
               
48-456
               

               
Cow position:
               
chr9:16811443-16811838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
258, 43
               

               
Conread position:
               
49-350
               

               
Cow position:
               
chr9:19493244-19493541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr9:37678109-37677788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 76
               

               
Conread position:
               
51-251
               

               
Cow position:
               
chr9:11198129-11198319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
52-439
               

               
Cow position:
               
chr9:9815630-9815252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 20
               

               
Conread position:
               
53-454
               

               
Cow position:
               
chr9:52637945-52638346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
54-263
               

               
Cow position:
               
chr9:1879592-1879393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
54-263
               

               
Cow position:
               
chr9:3847883-3847681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
54-359
               

               
Cow position:
               
chr9:39152468-39152764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
54-448
               

               
Cow position:
               
chr9:61303217-61302833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
143, 37
               

               
Conread position:
               
54-457
               

               
Cow position:
               
chr9:4512701-4512298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 30
               

               
Conread position:
               
62-347
               

               
Cow position:
               
chr9:47500001-47500284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
64-369
               

               
Cow position:
               
chr9:32816929-32817234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
68-277
               

               
Cow position:
               
chr9:8525040-8524841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
157, 58
               

               
Conread position:
               
68-435
               

               
Cow position:
               
chr9:8920198-8919847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
69-455
               

               
Cow position:
               
chr9:12910200-12910577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
69-456
               

               
Cow position:
               
chr9:35027969-35028345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
73-388
               

               
Cow position:
               
chr9:50543225-50543541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
73-391
               

               
Cow position:
               
chr9:33237591-33237279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 11
               

               
Conread position:
               
73-450
               

               
Cow position:
               
chr9:25805033-25804655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
115, 53
               

               
Conread position:
               
73-454
               

               
Cow position:
               
chr9:6397582-6397961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 53
               

               
Conread position:
               
73-457
               

               
Cow position:
               
chr9:17676922-17677296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
150, 52
               

               
Conread position:
               
73-463
               

               
Cow position:
               
chr9:10650106-10650473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
75-454
               

               
Cow position:
               
chr9:41728454-41728084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
78-456
               

               
Cow position:
               
chr9:40543128-40543496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
79-372
               

               
Cow position:
               
chr9:30652513-30652808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
79-454
               

               
Cow position:
               
chr9:58447932-58448301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
174, 14
               

               
Conread position:
               
81-440
               

               
Cow position:
               
chr9:62151292-62150949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
225, 45
               

               
Conread position:
               
81-448
               

               
Cow position:
               
chr9:25584011-25583661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
225, 66
               

               
Conread position:
               
82-451
               

               
Cow position:
               
chr9:6340505-6340859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
83-347
               

               
Cow position:
               
chr9:49417178-49416915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
83-366
               

               
Cow position:
               
chr9:3959247-3958976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 43
               

               
Conread position:
               
83-392
               

               
Cow position:
               
chr9:19555563-19555265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 44
               

               
Conread position:
               
83-444
               

               
Cow position:
               
chr9:30124109-30123764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
83-456
               

               
Cow position:
               
chr9:1371123-1370757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 15
               

               
Conread position:
               
83-456
               

               
Cow position:
               
chr9:35128685-35128297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
83-463
               

               
Cow position:
               
chr9:11949829-11950218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
139, 43
               

               
Conread position:
               
83-473
               

               
Cow position:
               
chr9:41679934-41679568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
87-280
               

               
Cow position:
               
chr9:31270964-31270775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
88-263
               

               
Cow position:
               
chr9:4323974-4324144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 38
               

               
Conread position:
               
88-444
               

               
Cow position:
               
chr9:51720718-51721053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
88-456
               

               
Cow position:
               
chr9:11168914-11168567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
91-313
               

               
Cow position:
               
chr9:41518437-41518664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
91-382
               

               
Cow position:
               
chr9:31638460-31638764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
91-387
               

               
Cow position:
               
chr9:9823325-9823613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-414
               

               
Cow position:
               
chr9:9654131-9654448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
91-456
               

               
Cow position:
               
chr9:8901043-8901407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
91-456
               

               
Cow position:
               
chr9:22433751-22434102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
91-456
               

               
Cow position:
               
chr9:49374370-49374004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
91-457
               

               
Cow position:
               
chr9:56065729-56065384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
353, 35
               

               
Conread position:
               
92-454
               

               
Cow position:
               
chr9:47445847-47446183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
92-457
               

               
Cow position:
               
chr9:12281149-12280794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 42
               

               
Conread position:
               
93-270
               

               
Cow position:
               
chr9:29330463-29330646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 40
               

               
Conread position:
               
93-360
               

               
Cow position:
               
chr9:3774341-3774081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
93-455
               

               
Cow position:
               
chr9:40215422-40215071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
98-455
               

               
Cow position:
               
chr9:62940868-62941198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
100-368
               

               
Cow position:
               
chr9:35105609-35105883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
100-370
               

               
Cow position:
               
chr9:17518317-17518584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 34
               

               
Conread position:
               
100-450
               

               
Cow position:
               
chr9:25557137-25556811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
101-456
               

               
Cow position:
               
chr9:26477387-26477034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 25
               

               
Conread position:
               
101-457
               

               
Cow position:
               
chr9:6851897-6852230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
96, 25
               

               
Conread position:
               
102-450
               

               
Cow position:
               
chr9:50202739-50202382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
95, 24
               

               
Conread position:
               
103-437
               

               
Cow position:
               
chr9:31557560-31557889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
94, 23
               

               
Conread position:
               
103-442
               

               
Cow position:
               
chr9:12225812-12226149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
103-454
               

               
Cow position:
               
chr9:31216257-31215903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 34
               

               
Conread position:
               
103-459
               

               
Cow position:
               
chr9:5456005-5456356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 23
               

               
Conread position:
               
104-272
               

               
Cow position:
               
chr9:9090186-9090361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
37, 47
               

               
Conread position:
               
108-450
               

               
Cow position:
               
chr9:19034504-19034182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
109-449
               

               
Cow position:
               
chr9:36857740-36857405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 17
               

               
Conread position:
               
109-456
               

               
Cow position:
               
chr9:47590817-47591162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
110-454
               

               
Cow position:
               
chr9:32019169-32019503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
113-382
               

               
Cow position:
               
chr9:11303919-11304183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
113-456
               

               
Cow position:
               
chr9:44388848-44389174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
193, 13
               

               
Conread position:
               
120-385
               

               
Cow position:
               
chr9:6596077-6596340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
121-439
               

               
Cow position:
               
chr9:52513296-52513627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 74
               

               
Conread position:
               
121-445
               

               
Cow position:
               
chr9:4262936-4263256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
76, 137
               

               
Conread position:
               
124-310
               

               
Cow position:
               
chr9:43013878-43013688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 131
               

               
Conread position:
               
124-455
               

               
Cow position:
               
chr9:38624476-38624801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
126-451
               

               
Cow position:
               
chr9:26102876-26102559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
21, 55
               

               
Conread position:
               
126-457
               

               
Cow position:
               
chr9:35547422-35547086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
126-461
               

               
Cow position:
               
chr9:33411423-33411754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
127-368
               

               
Cow position:
               
chr9:1867600-1867359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
127-427
               

               
Cow position:
               
chr9:34284098-34283804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
128-439
               

               
Cow position:
               
chr9:1755995-1756312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
128-444
               

               
Cow position:
               
chr9:64637694-64637386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
128-449
               

               
Cow position:
               
chr9:20816012-20815695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
221, 125
               

               
Conread position:
               
128-453
               

               
Cow position:
               
chr9:18426067-18425733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 133
               

               
Conread position:
               
128-468
               

               
Cow position:
               
chr9:36628253-36627934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr9:26310650-26310434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
130-438
               

               
Cow position:
               
chr9:36843934-36843623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 65
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr9:52839740-52839975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
131-414
               

               
Cow position:
               
chr9:41394508-41394786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr9:20579459-20579766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
65, 47
               

               
Conread position:
               
132-436
               

               
Cow position:
               
chr9:39211752-39211453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
132-450
               

               
Cow position:
               
chr9:33114492-33114167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 123
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr9:11310008-11309683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
132-454
               

               
Cow position:
               
chr9:32669802-32670121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
133-333
               

               
Cow position:
               
chr9:43937084-43936887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
173, 72
               

               
Conread position:
               
133-362
               

               
Cow position:
               
chr9:33697173-33696949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
133-434
               

               
Cow position:
               
chr9:62471813-62471521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
133-451
               

               
Cow position:
               
chr9:48451842-48451539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
133-456
               

               
Cow position:
               
chr9:11123338-11123657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 85
               

               
Conread position:
               
134-362
               

               
Cow position:
               
chr9:10819689-10819915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
134-445
               

               
Cow position:
               
chr9:32348678-32348990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
172, 74
               

               
Conread position:
               
135-454
               

               
Cow position:
               
chr9:1877863-1878174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
135-456
               

               
Cow position:
               
chr9:60081048-60080715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
135-458
               

               
Cow position:
               
chr9:3573612-3573284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
136-312
               

               
Cow position:
               
chr9:8306993-8306817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
137-457
               

               
Cow position:
               
chr9:11969328-11969007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 119
               

               
Conread position:
               
139-456
               

               
Cow position:
               
chr9:40507466-40507771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 25
               

               
Conread position:
               
140-454
               

               
Cow position:
               
chr9:34410258-34410568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
141-434
               

               
Cow position:
               
chr9:31359737-31359449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
141-456
               

               
Cow position:
               
chr9:40005612-40005299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 86
               

               
Conread position:
               
142-350
               

               
Cow position:
               
chr9:53326615-53326828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
55, 114
               

               
Conread position:
               
142-431
               

               
Cow position:
               
chr9:55438289-55438585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
142-436
               

               
Cow position:
               
chr9:25400062-25400345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
142-448
               

               
Cow position:
               
chr9:44396795-44396489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
142-456
               

               
Cow position:
               
chr9:13743797-13744112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 110
               

               
Conread position:
               
143-454
               

               
Cow position:
               
chr9:37934102-37934414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 41
               

               
Conread position:
               
145-462
               

               
Cow position:
               
chr9:5899829-5900139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
53, 99
               

               
Conread position:
               
148-437
               

               
Cow position:
               
chr9:4630234-4629950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
50, 69
               

               
Conread position:
               
156-416
               

               
Cow position:
               
chr9:46930580-46930321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
157-456
               

               
Cow position:
               
chr9:9311980-9311681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 19
               

               
Conread position:
               
157-456
               

               
Cow position:
               
chr9:33584562-33584862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
159-363
               

               
Cow position:
               
chr9:3343861-3343661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
161-455
               

               
Cow position:
               
chr9:38941315-38941614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 64
               

               
Conread position:
               
162-436
               

               
Cow position:
               
chr9:38645227-38645507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 85
               

               
Conread position:
               
163-396
               

               
Cow position:
               
chr9:64064246-64064483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
166-448
               

               
Cow position:
               
chr9:23955872-23956147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 52
               

               
Conread position:
               
167-450
               

               
Cow position:
               
chr9:50310663-50310935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
196, 16
               

               
Conread position:
               
169-360
               

               
Cow position:
               
chr9:4580301-4580489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
170-449
               

               
Cow position:
               
chr9:45171111-45171394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
179-374
               

               
Cow position:
               
chr9:5649879-5650071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
43, 26
               

               
Conread position:
               
179-505
               

               
Cow position:
               
chr9:8992089-8992405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
180-434
               

               
Cow position:
               
chr9:29194925-29195188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
180-456
               

               
Cow position:
               
chr9:28263615-28263339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
180-457
               

               
Cow position:
               
chr9:56262011-56262288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
18, 51
               

               
Conread position:
               
181-370
               

               
Cow position:
               
chr9:23797333-23797142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
181-456
               

               
Cow position:
               
chr9:28156786-28156522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
184-351
               

               
Cow position:
               
chr9:55532905-55532738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 39
               

               
Conread position:
               
184-449
               

               
Cow position:
               
chr9:52754763-52755023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
186-448
               

               
Cow position:
               
chr9:44584683-44584431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
187-363
               

               
Cow position:
               
chr9:62459455-62459279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
187-455
               

               
Cow position:
               
chr9:5110946-5110679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
190-449
               

               
Cow position:
               
chr9:47517280-47517026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
194-445
               

               
Cow position:
               
chr9:44758850-44759094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
195-416
               

               
Cow position:
               
chr9:33838233-33838446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
196-355
               

               
Cow position:
               
chr9:38289248-38289403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
110, 22
               

               
Conread position:
               
196-361
               

               
Cow position:
               
chr9:48100874-48100710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
196-375
               

               
Cow position:
               
chr9:41781731-41781554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
196-434
               

               
Cow position:
               
chr9:33542133-33541896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
93, 8
               

               
Conread position:
               
196-436
               

               
Cow position:
               
chr9:5163907-5164143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
196-442
               

               
Cow position:
               
chr9:33823198-33822953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 64
               

               
Conread position:
               
196-453
               

               
Cow position:
               
chr9:29819792-29819551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
110, 18
               

               
Conread position:
               
196-454
               

               
Cow position:
               
chr9:7805886-7806130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
110, 17
               

               
Conread position:
               
196-455
               

               
Cow position:
               
chr9:34278978-34279235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
196-456
               

               
Cow position:
               
chr9:6954170-6954430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
196-456
               

               
Cow position:
               
chr9:8628839-8629091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
110, 57
               

               
Conread position:
               
196-466
               

               
Cow position:
               
chr9:17840598-17840865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
200-450
               

               
Cow position:
               
chr9:54664925-54664676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
168, 35
               

               
Conread position:
               
202-453
               

               
Cow position:
               
chr9:36453469-36453713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
202-454
               

               
Cow position:
               
chr9:34344681-34344434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
203-453
               

               
Cow position:
               
chr9:52030548-52030304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 29
               

               
Conread position:
               
204-440
               

               
Cow position:
               
chr9:54986084-54986323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 26
               

               
Conread position:
               
205-457
               

               
Cow position:
               
chr9:17276819-17277071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
205-460
               

               
Cow position:
               
chr9:32387913-32388167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
210-436
               

               
Cow position:
               
chr9:41964671-41964890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
214-436
               

               
Cow position:
               
chr9:55529856-55529645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
215-436
               

               
Cow position:
               
chr9:7101502-7101276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 38
               

               
Conread position:
               
215-449
               

               
Cow position:
               
chr9:34484655-34484419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
215-457
               

               
Cow position:
               
chr9:12398657-12398416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
91, 6
               

               
Conread position:
               
216-416
               

               
Cow position:
               
chr9:38865923-38866122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
217-416
               

               
Cow position:
               
chr9:24652462-24652261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
217-448
               

               
Cow position:
               
chr9:48017716-48017937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
217-456
               

               
Cow position:
               
chr9:42586498-42586726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 36
               

               
Conread position:
               
218-434
               

               
Cow position:
               
chr9:31513882-31514091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
218-455
               

               
Cow position:
               
chr9:62145117-62144874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr9:54411101-54411343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
218-463
               

               
Cow position:
               
chr9:37199184-37198945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 35
               

               
Conread position:
               
219-455
               

               
Cow position:
               
chr9:16217031-16216801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
220-413
               

               
Cow position:
               
chr9:56827536-56827338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
220-448
               

               
Cow position:
               
chr9:4241461-4241237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
86, 34
               

               
Conread position:
               
220-456
               

               
Cow position:
               
chr9:14738304-14738075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 33
               

               
Conread position:
               
220-459
               

               
Cow position:
               
chr9:33347435-33347664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 31
               

               
Conread position:
               
221-434
               

               
Cow position:
               
chr9:7859583-7859794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-454
               

               
Cow position:
               
chr9:7805828-7805607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
228, 26
               

               
Conread position:
               
221-456
               

               
Cow position:
               
chr9:35728980-35729211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
14, 9
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr9:7611738-7611966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr9:20451574-20451808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr9:29984518-29984283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
221-463
               

               
Cow position:
               
chr9:5342194-5342433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
85, 32
               

               
Conread position:
               
222-445
               

               
Cow position:
               
chr9:63170025-63169802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
84, 32
               

               
Conread position:
               
222-454
               

               
Cow position:
               
chr9:25375683-25375909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
84, 31
               

               
Conread position:
               
223-445
               

               
Cow position:
               
chr9:39709909-39709686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
223-450
               

               
Cow position:
               
chr9:12786421-12786647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 31
               

               
Conread position:
               
223-456
               

               
Cow position:
               
chr9:32661974-32662214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
223-456
               

               
Cow position:
               
chr9:44624323-44624544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
224-453
               

               
Cow position:
               
chr9:23970845-23971068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
225-439
               

               
Cow position:
               
chr9:21292357-21292568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 28
               

               
Conread position:
               
226-455
               

               
Cow position:
               
chr9:16121572-16121353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 27
               

               
Conread position:
               
227-448
               

               
Cow position:
               
chr9:27345536-27345759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
227-457
               

               
Cow position:
               
chr9:41644702-41644932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
228-391
               

               
Cow position:
               
chr9:9316501-9316339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 25
               

               
Conread position:
               
228-438
               

               
Cow position:
               
chr9:53124135-53123926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 5
               

               
Conread position:
               
228-445
               

               
Cow position:
               
chr9:39149126-39148915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
228-454
               

               
Cow position:
               
chr9:14882086-14882311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
78, 25
               

               
Conread position:
               
228-456
               

               
Cow position:
               
chr9:32858585-32858822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
228-456
               

               
Cow position:
               
chr9:44527153-44526931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
148, 26
               

               
Conread position:
               
230-434
               

               
Cow position:
               
chr9:48115725-48115527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
232-436
               

               
Cow position:
               
chr9:22165670-22165875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
232-456
               

               
Cow position:
               
chr9:36458044-36457819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
21, 217
               

               
Conread position:
               
233-450
               

               
Cow position:
               
chr9:11098414-11098623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 25
               

               
Conread position:
               
233-461
               

               
Cow position:
               
chr9:4181507-4181730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
237-436
               

               
Cow position:
               
chr9:28342602-28342813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
237-450
               

               
Cow position:
               
chr9:62631633-62631839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
237-455
               

               
Cow position:
               
chr9:8767378-8767592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
237-456
               

               
Cow position:
               
chr9:8613173-8613390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
239-450
               

               
Cow position:
               
chr9:43680156-43679949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
67, 14
               

               
Conread position:
               
240-454
               

               
Cow position:
               
chr9:45484146-45483933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
242-454
               

               
Cow position:
               
chr9:52511153-52510939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
243-451
               

               
Cow position:
               
chr9:27686615-27686410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
243-456
               

               
Cow position:
               
chr9:2397841-2397632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 131
               

               
Conread position:
               
243-457
               

               
Cow position:
               
chr9:8537339-8537128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
243-457
               

               
Cow position:
               
chr9:39061647-39061432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 73
               

               
Conread position:
               
244-445
               

               
Cow position:
               
chr9:12495247-12495047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
22, 54
               

               
Conread position:
               
246-457
               

               
Cow position:
               
chr9:55173608-55173819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 86
               

               
Conread position:
               
247-436
               

               
Cow position:
               
chr9:40603697-40603509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
247-456
               

               
Cow position:
               
chr9:151897-151688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
248-453
               

               
Cow position:
               
chr9:30664959-30665175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
250-450
               

               
Cow position:
               
chr9:34917156-34917349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
252-444
               

               
Cow position:
               
chr9:9557710-9557517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr9:34707288-34707478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
185, 120
               

               
Conread position:
               
252-445
               

               
Cow position:
               
chr9:37950874-37951067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
252-448
               

               
Cow position:
               
chr9:12773714-12773524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
252-448
               

               
Cow position:
               
chr9:41470074-41470271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 88
               

               
Conread position:
               
252-449
               

               
Cow position:
               
chr9:43345755-43345564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
252-450
               

               
Cow position:
               
chr9:34362760-34362563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 25
               

               
Conread position:
               
252-454
               

               
Cow position:
               
chr9:22803947-22804145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 52
               

               
Conread position:
               
252-455
               

               
Cow position:
               
chr9:5068865-5068660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
54, 105
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr9:48809162-48808969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr9:59586335-59586137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 116
               

               
Conread position:
               
252-457
               

               
Cow position:
               
chr9:35466498-35466701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
54, 168
               

               
Conread position:
               
252-461
               

               
Cow position:
               
chr9:31344583-31344793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
252-470
               

               
Cow position:
               
chr9:28718736-28718528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 136
               

               
Conread position:
               
253-451
               

               
Cow position:
               
chr9:24191129-24191328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
253-455
               

               
Cow position:
               
chr9:6447131-6446928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 167
               

               
Conread position:
               
253-456
               

               
Cow position:
               
chr9:53631903-53632104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
254-437
               

               
Cow position:
               
chr9:37955149-37955333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
254-444
               

               
Cow position:
               
chr9:48282224-48282028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 71
               

               
Conread position:
               
254-455
               

               
Cow position:
               
chr9:3847424-3847218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
254-455
               

               
Cow position:
               
chr9:13993787-13993586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr9:20828924-20828726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
52, 24
               

               
Conread position:
               
254-456
               

               
Cow position:
               
chr9:35295712-35295517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
52, 119
               

               
Conread position:
               
254-457
               

               
Cow position:
               
chr9:20237946-20238150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
254-457
               

               
Cow position:
               
chr9:44314684-44314887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
52, 110
               

               
Conread position:
               
255-445
               

               
Cow position:
               
chr9:26394329-26394515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
255-449
               

               
Cow position:
               
chr9:34276189-34276384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
255-459
               

               
Cow position:
               
chr9:6929771-6929976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
256-444
               

               
Cow position:
               
chr9:48182489-48182677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 163
               

               
Conread position:
               
258-451
               

               
Cow position:
               
chr9:53061680-53061480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
258-455
               

               
Cow position:
               
chr9:16115590-16115782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
258-456
               

               
Cow position:
               
chr9:28722722-28722526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
258-457
               

               
Cow position:
               
chr9:8645285-8645086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
258-463
               

               
Cow position:
               
chr9:7543241-7543440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
258-470
               

               
Cow position:
               
chr9:55892247-55892460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 107
               

               
Conread position:
               
260-439
               

               
Cow position:
               
chr9:61909404-61909223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
260-445
               

               
Cow position:
               
chr9:61286778-61286594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
260-453
               

               
Cow position:
               
chr9:13230202-13230395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
260-454
               

               
Cow position:
               
chr9:34196206-34196019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr9:5772661-5772858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr9:10635332-10635526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 144
               

               
Conread position:
               
262-450
               

               
Cow position:
               
chr9:49680128-49679938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
263-413
               

               
Cow position:
               
chr9:44093069-44093220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
264-436
               

               
Cow position:
               
chr9:26557980-26557807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
264-438
               

               
Cow position:
               
chr9:14357427-14357252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
264-449
               

               
Cow position:
               
chr9:1403524-1403707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 30
               

               
Conread position:
               
264-456
               

               
Cow position:
               
chr9:33127842-33128030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
264-456
               

               
Cow position:
               
chr9:40221174-40221362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
264-457
               

               
Cow position:
               
chr9:17785554-17785747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
44, 182
               

               
Conread position:
               
264-457
               

               
Cow position:
               
chr9:53323771-53323965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 183
               

               
Conread position:
               
264-459
               

               
Cow position:
               
chr9:22447282-22447476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 102
               

               
Conread position:
               
264-489
               

               
Cow position:
               
chr9:35932802-35933025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
266-450
               

               
Cow position:
               
chr9:36634517-36634332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
266-454
               

               
Cow position:
               
chr9:51037287-51037097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 184
               

               
Conread position:
               
266-456
               

               
Cow position:
               
chr9:9091095-9091286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
266-467
               

               
Cow position:
               
chr9:28315439-28315233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
267-456
               

               
Cow position:
               
chr9:34423631-34423441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 182
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chr9:20017407-20017217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
268-445
               

               
Cow position:
               
chr9:54598681-54598506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
268-456
               

               
Cow position:
               
chr9:60741171-60741361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
268-457
               

               
Cow position:
               
chr9:31346522-31346335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 109
               

               
Conread position:
               
269-457
               

               
Cow position:
               
chr9:17027204-17027018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
270-444
               

               
Cow position:
               
chr9:8592421-8592596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 86
               

               
Conread position:
               
270-455
               

               
Cow position:
               
chr9:61019356-61019541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
36, 178
               

               
Conread position:
               
270-456
               

               
Cow position:
               
chr9:55013326-55013520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 26
               

               
Conread position:
               
271-448
               

               
Cow position:
               
chr9:48367520-48367699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
271-454
               

               
Cow position:
               
chr9:63185689-63185873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
271-455
               

               
Cow position:
               
chr9:6205336-6205522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
273-454
               

               
Cow position:
               
chr9:18817707-18817888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
276-456
               

               
Cow position:
               
chr9:34760364-34760543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 93
               

               
Conread position:
               
279-455
               

               
Cow position:
               
chr9:17769315-17769145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
282-459
               

               
Cow position:
               
chr9:62136120-62136298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
284-456
               

               
Cow position:
               
chr9:51891238-51891073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
287-435
               

               
Cow position:
               
chr9:11199948-11200097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
287-450
               

               
Cow position:
               
chr9:13722149-13722313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
287-454
               

               
Cow position:
               
chr9:47510581-47510745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
290-454
               

               
Cow position:
               
chr9:19656990-19657149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
16, 66
               

               
Conread position:
               
295-456
               

               
Cow position:
               
chr9:54639838-54639995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
296-451
               

               
Cow position:
               
chr9:16826215-16826375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
303-454
               

               
Cow position:
               
chr9:48046510-48046360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
305-435
               

               
Cow position:
               
chr9:26578232-26578365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
305-456
               

               
Cow position:
               
chr9:3946178-3946325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
135, 37
               

               
Conread position:
               
307-415
               

               
Cow position:
               
chr9:35360321-35360429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
307-456
               

               
Cow position:
               
chr9:45170413-45170562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
310-449
               

               
Cow position:
               
chr9:2985036-2984897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
311-461
               

               
Cow position:
               
chr9:28866127-28866275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 17
               

               
Conread position:
               
320-454
               

               
Cow position:
               
chr9:6392792-6392660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
321-462
               

               
Cow position:
               
chr9:16770955-16770806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               
Show alignments to all cow chromosomes.