Cow genome map

Conread name: unkn-AR19A3

Conread position: 61-384
Cow position: chr11:34413077-34413397 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 172, 0

Conread position: 75-372
Cow position: chr11:47883036-47882756 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 204
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 89, 0

Conread position: 76-325
Cow position: chr11:61178601-61178357 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 100, 84

Conread position: 76-355
Cow position: chr11:58938505-58938775 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 76-406
Cow position: chr11:33340908-33341226 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 214
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 75, 0

Conread position: 77-331
Cow position: chr11:59916380-59916140 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 95

Conread position: 78-405
Cow position: chr11:48272454-48272119 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 0

Conread position: 78-406
Cow position: chr11:73924323-73924641 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 231
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 87, 57

Conread position: 78-406
Cow position: chr11:79018806-79019139 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 216
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 45

Conread position: 79-212
Cow position: chr11:29983399-29983532 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 82-316
Cow position: chr11:13843678-13843456 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 177, 119

Conread position: 84-336
Cow position: chr11:62749247-62749480 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 71, 55

Conread position: 85-211
Cow position: chr11:64932125-64932251 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 95
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 85-406
Cow position: chr11:59702717-59702405 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 149, 0

Conread position: 86-401
Cow position: chr11:64351563-64351868 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 80

Conread position: 87-318
Cow position: chr11:64952055-64951833 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 87-405
Cow position: chr11:15073095-15072778 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 207
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 113

Conread position: 89-406
Cow position: chr11:52380636-52380953 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 205
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 42, 99

Conread position: 91-212
Cow position: chr11:3234336-3234216 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 21

Conread position: 92-405
Cow position: chr11:83230175-83230475 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 27, 20

Conread position: 93-377
Cow position: chr11:83578952-83579229 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 48

Conread position: 93-406
Cow position: chr11:69119514-69119212 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 94-298
Cow position: chr11:36849150-36848943 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 167

Conread position: 94-406
Cow position: chr11:69076126-69075829 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 282, 66

Conread position: 95-377
Cow position: chr11:62609831-62609552 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 179
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 131, 40

Conread position: 95-397
Cow position: chr11:3791074-3790764 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 38

Conread position: 96-405
Cow position: chr11:14466265-14466567 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 200
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 0

Conread position: 97-405
Cow position: chr11:33311199-33310894 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 190, 67

Conread position: 98-406
Cow position: chr11:26845380-26845674 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 67, 0

Conread position: 99-374
Cow position: chr11:42452718-42452981 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 163, 91

Conread position: 101-320
Cow position: chr11:37982362-37982573 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 101-400
Cow position: chr11:22747122-22747403 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 197
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 231, 85

Conread position: 104-406
Cow position: chr11:10620109-10620410 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 201
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 153, 106

Conread position: 105-340
Cow position: chr11:47164705-47164934 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 151
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 105-405
Cow position: chr11:44234557-44234274 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 196
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 258, 99

Conread position: 105-406
Cow position: chr11:952468-952188 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 192
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 108-396
Cow position: chr11:10363169-10363458 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 129, 83

Conread position: 111-397
Cow position: chr11:62150681-62150963 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 48, 17

Conread position: 115-356
Cow position: chr11:65803674-65803902 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 179, 55

Conread position: 118-405
Cow position: chr11:377451-377722 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 170-406
Cow position: chr11:28644240-28644005 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 156
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 198, 57

Conread position: 170-406
Cow position: chr11:44575598-44575823 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 156
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 33, 59

Conread position: 175-387
Cow position: chr11:77128812-77128600 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 136
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 37, 196

Conread position: 178-432
Cow position: chr11:56290658-56290402 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 48, 56

Conread position: 187-338
Cow position: chr11:70741280-70741129 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 64

Conread position: 187-356
Cow position: chr11:58173760-58173594 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 40, 0

Conread position: 187-366
Cow position: chr11:32690833-32691013 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 47

Conread position: 187-376
Cow position: chr11:83323701-83323514 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 64, 25

Conread position: 188-374
Cow position: chr11:50073074-50072888 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 188-406
Cow position: chr11:2092462-2092254 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 186, 39

Conread position: 192-406
Cow position: chr11:20761973-20761767 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 193-375
Cow position: chr11:19606708-19606527 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 193-400
Cow position: chr11:66424748-66424954 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 34

Conread position: 193-404
Cow position: chr11:25387199-25386987 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 32, 42

Conread position: 193-405
Cow position: chr11:36658691-36658899 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 140
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 16, 42

Conread position: 193-405
Cow position: chr11:41293684-41293896 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 43

Conread position: 193-405
Cow position: chr11:70826080-70825872 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 41

Conread position: 193-406
Cow position: chr11:27747055-27746846 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 41

Conread position: 194-354
Cow position: chr11:61454388-61454543 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 194-385
Cow position: chr11:82730867-82731058 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 40

Conread position: 196-355
Cow position: chr11:17321779-17321617 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 98

Conread position: 196-405
Cow position: chr11:42043872-42044072 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 135
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 32, 0

Conread position: 196-406
Cow position: chr11:1849046-1849251 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 66

Conread position: 196-406
Cow position: chr11:47772260-47772472 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 197-396
Cow position: chr11:48248088-48248286 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 173, 0

Conread position: 197-406
Cow position: chr11:30955124-30954920 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 198-356
Cow position: chr11:15382378-15382534 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 200-397
Cow position: chr11:65762467-65762670 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 140, 16

Conread position: 200-398
Cow position: chr11:47837444-47837246 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 128
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 26, 34

Conread position: 204-362
Cow position: chr11:30894886-30895040 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 204-371
Cow position: chr11:29786378-29786544 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 160, 0

Conread position: 204-373
Cow position: chr11:21885950-21885784 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 161, 10

Conread position: 204-383
Cow position: chr11:8437572-8437753 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 164

Conread position: 204-403
Cow position: chr11:49872770-49872963 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 134
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 204-405
Cow position: chr11:27404954-27405150 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 204-405
Cow position: chr11:40608475-40608675 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 181, 10

Conread position: 204-405
Cow position: chr11:63998973-63999168 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 29, 0

Conread position: 204-406
Cow position: chr11:35153704-35153904 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 204-406
Cow position: chr11:46580474-46580276 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 206-376
Cow position: chr11:53553334-53553168 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 206-406
Cow position: chr11:1625107-1625303 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 206-426
Cow position: chr11:17721684-17721903 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 171, 27

Conread position: 207-405
Cow position: chr11:11125778-11125584 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 207-405
Cow position: chr11:72292670-72292464 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 157, 0

Conread position: 209-401
Cow position: chr11:35213054-35213244 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 209-401
Cow position: chr11:77319528-77319338 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 209-403
Cow position: chr11:4637059-4637250 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 209-403
Cow position: chr11:45646477-45646671 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 28, 18

Conread position: 209-406
Cow position: chr11:33409147-33409340 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 209-406
Cow position: chr11:48086034-48085836 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 95, 25

Conread position: 210-377
Cow position: chr11:69978085-69977919 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 0

Conread position: 210-405
Cow position: chr11:35536701-35536509 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 210-406
Cow position: chr11:24599276-24599469 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 155, 24

Conread position: 210-406
Cow position: chr11:39499472-39499274 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 24

Conread position: 210-406
Cow position: chr11:52297106-52297300 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 136, 0

Conread position: 211-377
Cow position: chr11:20205738-20205904 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 211-398
Cow position: chr11:30484033-30483845 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 165, 0

Conread position: 212-406
Cow position: chr11:29960406-29960216 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 162, 15

Conread position: 214-383
Cow position: chr11:62663124-62663291 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 154, 87

Conread position: 214-403
Cow position: chr11:30867294-30867104 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 20

Conread position: 214-406
Cow position: chr11:47545245-47545051 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 30, 96

Conread position: 214-406
Cow position: chr11:50152702-50152895 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 216-405
Cow position: chr11:51729393-51729209 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 216-406
Cow position: chr11:30355165-30354978 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 216-406
Cow position: chr11:35580370-35580178 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 0

Conread position: 216-406
Cow position: chr11:71390457-71390643 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 156, 61

Conread position: 225-351
Cow position: chr11:63165548-63165673 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 8, 0

Conread position: 225-366
Cow position: chr11:897773-897632 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 225-372
Cow position: chr11:46922786-46922933 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 8

Conread position: 225-375
Cow position: chr11:31228061-31227913 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 225-376
Cow position: chr11:55052970-55052820 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 131, 8

Conread position: 225-377
Cow position: chr11:2907430-2907576 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 143, 8

Conread position: 225-395
Cow position: chr11:2575803-2575974 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 225-401
Cow position: chr11:20238777-20238597 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 225-401
Cow position: chr11:80556319-80556146 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 161, 83

Conread position: 225-404
Cow position: chr11:44636656-44636835 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 131, 8

Conread position: 225-404
Cow position: chr11:48296129-48295955 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:2917488-2917665 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:3393111-3393291 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 121
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 161, 8

Conread position: 225-406
Cow position: chr11:10213469-10213645 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 49, 0

Conread position: 225-406
Cow position: chr11:17036428-17036609 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 225-406
Cow position: chr11:17083212-17083390 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 9

Conread position: 225-406
Cow position: chr11:17676274-17676450 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:23407563-23407382 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 151, 8

Conread position: 225-406
Cow position: chr11:27248589-27248413 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 152, 8

Conread position: 225-406
Cow position: chr11:30192278-30192095 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 122
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 104, 146

Conread position: 225-406
Cow position: chr11:30494092-30493919 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:31410779-31410963 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 8

Conread position: 225-406
Cow position: chr11:34121299-34121115 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 27

Conread position: 225-406
Cow position: chr11:34646688-34646508 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:35684402-35684574 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:44032110-44031922 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 109, 8

Conread position: 225-406
Cow position: chr11:48544539-48544352 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 39, 8

Conread position: 225-406
Cow position: chr11:62789230-62789049 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 225-406
Cow position: chr11:62812851-62813031 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 161, 8

Conread position: 225-406
Cow position: chr11:63866560-63866734 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 34, 8

Conread position: 225-406
Cow position: chr11:80564391-80564213 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr11:80923224-80923403 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 154, 79

Conread position: 226-405
Cow position: chr11:23586736-23586557 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 143, 9

Conread position: 226-406
Cow position: chr11:23128442-23128622 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 150, 12

Conread position: 226-406
Cow position: chr11:65767298-65767118 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 228-403
Cow position: chr11:259075-259249 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 135, 0

Conread position: 228-406
Cow position: chr11:6194301-6194126 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 228-406
Cow position: chr11:8428608-8428431 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 228-406
Cow position: chr11:11558269-11558088 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 228-406
Cow position: chr11:16342132-16342310 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 228-406
Cow position: chr11:42159960-42160140 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 130, 75

Conread position: 229-365
Cow position: chr11:16842892-16843024 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 229-405
Cow position: chr11:62239840-62239665 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 156, 117

Conread position: 229-406
Cow position: chr11:30830518-30830695 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 229-406
Cow position: chr11:39060507-39060679 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 229-406
Cow position: chr11:43898234-43898060 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 229-406
Cow position: chr11:53279620-53279794 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 144, 14

Conread position: 229-406
Cow position: chr11:67615151-67615326 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 230-364
Cow position: chr11:18447396-18447531 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 6, 0

Conread position: 230-395
Cow position: chr11:44222980-44222817 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 146, 74

Conread position: 230-406
Cow position: chr11:67614827-67615008 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 233-406
Cow position: chr11:11232364-11232534 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 70, 0

Conread position: 233-406
Cow position: chr11:64406320-64406146 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 155, 134

Conread position: 234-373
Cow position: chr11:18915117-18914979 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 112, 131

Conread position: 234-375
Cow position: chr11:64044324-64044183 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 234-385
Cow position: chr11:18851998-18851848 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 234-398
Cow position: chr11:249391-249556 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 138, 0

Conread position: 234-404
Cow position: chr11:80819914-80820078 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 234-405
Cow position: chr11:63469966-63469796 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 145, 0

Conread position: 234-406
Cow position: chr11:83032771-83032602 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 116
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 133, 0

Conread position: 234-422
Cow position: chr11:13061144-13061332 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 131

Conread position: 234-429
Cow position: chr11:28168332-28168526 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 177, 0

Conread position: 235-385
Cow position: chr11:15017146-15016998 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 0

Conread position: 235-404
Cow position: chr11:35873913-35874082 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 235-405
Cow position: chr11:55494769-55494599 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 235-406
Cow position: chr11:45435170-45435001 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 141

Conread position: 236-366
Cow position: chr11:16801868-16801993 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 237-405
Cow position: chr11:80537574-80537407 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 139, 14

Conread position: 241-406
Cow position: chr11:82740593-82740428 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 243-376
Cow position: chr11:36328953-36329086 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 243-405
Cow position: chr11:35803218-35803055 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 38, 65

Conread position: 245-384
Cow position: chr11:5543-5407 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 250-406
Cow position: chr11:81162358-81162514 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 105
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 0, 0

Conread position: 255-406
Cow position: chr11:24937735-24937584 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 256-406
Cow position: chr11:69392631-69392482 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 261-406
Cow position: chr11:54218778-54218637 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 282-406
Cow position: chr11:1779286-1779409 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 90
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 36, 0

Conread position: 304-406
Cow position: chr11:16251223-16251326 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Show alignments to all cow chromosomes.