Cow genome map

Conread name: unkn-AR19A3

Conread position: 74-376
Cow position: chr12:29779687-29779986 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 241, 123

Conread position: 75-323
Cow position: chr12:8472502-8472762 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 167

Conread position: 75-331
Cow position: chr12:21044837-21045092 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 165
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 119, 160

Conread position: 75-405
Cow position: chr12:18765754-18766077 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 210
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 65

Conread position: 77-406
Cow position: chr12:27037228-27037551 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 82

Conread position: 89-404
Cow position: chr12:29770376-29770671 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 91-406
Cow position: chr12:33319466-33319768 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 96-406
Cow position: chr12:6720517-6720223 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 219, 64

Conread position: 97-405
Cow position: chr12:44920227-44919935 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 193
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 69

Conread position: 98-206
Cow position: chr12:21837860-21837968 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 98-350
Cow position: chr12:5543601-5543839 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 100-404
Cow position: chr12:45820162-45820466 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 92

Conread position: 104-406
Cow position: chr12:11090605-11090322 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 194
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 138, 67

Conread position: 113-344
Cow position: chr12:27572057-27572280 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 52

Conread position: 154-406
Cow position: chr12:32715192-32714944 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 169
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 30, 7

Conread position: 190-375
Cow position: chr12:46463956-46464137 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 44

Conread position: 191-422
Cow position: chr12:18020970-18020740 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 151
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 228, 110

Conread position: 193-385
Cow position: chr12:34148247-34148442 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 132
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 25, 41

Conread position: 194-372
Cow position: chr12:19502323-19502496 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 194-383
Cow position: chr12:46120721-46120914 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 194-406
Cow position: chr12:15531163-15530958 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 196-406
Cow position: chr12:11660027-11659825 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 183, 31

Conread position: 196-406
Cow position: chr12:44622455-44622254 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 202-406
Cow position: chr12:18577943-18577738 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 15, 170

Conread position: 202-406
Cow position: chr12:32169642-32169439 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 168, 119

Conread position: 204-369
Cow position: chr12:36261789-36261624 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 204-384
Cow position: chr12:15703399-15703576 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 204-401
Cow position: chr12:15429501-15429692 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 130
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 204-401
Cow position: chr12:18388191-18388383 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 116, 52

Conread position: 204-406
Cow position: chr12:15122420-15122222 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 119, 17

Conread position: 204-406
Cow position: chr12:16670364-16670165 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 204-406
Cow position: chr12:17080361-17080158 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 204-406
Cow position: chr12:35669371-35669573 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 57

Conread position: 204-406
Cow position: chr12:42879794-42879593 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 44

Conread position: 205-351
Cow position: chr12:24437534-24437682 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 206-406
Cow position: chr12:42684847-42685047 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 208-371
Cow position: chr12:16605577-16605740 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 48

Conread position: 209-397
Cow position: chr12:19261289-19261102 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 209-406
Cow position: chr12:5631788-5631982 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 159, 24

Conread position: 209-406
Cow position: chr12:9143481-9143287 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 216-404
Cow position: chr12:15089603-15089415 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 158, 67

Conread position: 216-406
Cow position: chr12:24032584-24032397 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 151, 0

Conread position: 225-349
Cow position: chr12:14986826-14986704 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 225-366
Cow position: chr12:45092524-45092384 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 225-373
Cow position: chr12:18123747-18123600 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 225-377
Cow position: chr12:12232960-12232810 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 60, 79

Conread position: 225-385
Cow position: chr12:5839577-5839737 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 8

Conread position: 225-386
Cow position: chr12:30745797-30745638 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 12, 99

Conread position: 225-387
Cow position: chr12:26151382-26151541 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 8

Conread position: 225-397
Cow position: chr12:26777113-26777283 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 160, 8

Conread position: 225-405
Cow position: chr12:5714704-5714529 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 225-405
Cow position: chr12:37169867-37170042 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 156, 0

Conread position: 225-405
Cow position: chr12:37514204-37514382 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr12:6485134-6485313 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 151, 83

Conread position: 225-406
Cow position: chr12:7884603-7884782 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr12:9766799-9766980 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 8

Conread position: 225-406
Cow position: chr12:17031693-17031515 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 8

Conread position: 225-406
Cow position: chr12:18582915-18583093 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr12:24116284-24116463 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 119, 0

Conread position: 226-407
Cow position: chr12:5554257-5554437 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 7, 0

Conread position: 228-366
Cow position: chr12:15260838-15260701 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 228-372
Cow position: chr12:27357463-27357320 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 228-406
Cow position: chr12:3371470-3371644 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 228-406
Cow position: chr12:17879226-17879404 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 149, 55

Conread position: 228-406
Cow position: chr12:19507712-19507531 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 138, 10

Conread position: 228-406
Cow position: chr12:30605090-30605265 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 229-345
Cow position: chr12:29731389-29731273 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 229-383
Cow position: chr12:17252124-17252277 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 229-387
Cow position: chr12:23644728-23644887 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 92, 0

Conread position: 229-392
Cow position: chr12:33948979-33948816 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 229-405
Cow position: chr12:2813302-2813126 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 98

Conread position: 229-406
Cow position: chr12:17269877-17269699 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 229-406
Cow position: chr12:19691159-19691334 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 149, 72

Conread position: 229-406
Cow position: chr12:25561444-25561270 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 229-406
Cow position: chr12:36544567-36544750 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 27

Conread position: 229-406
Cow position: chr12:39465654-39465476 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 122
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 165, 0

Conread position: 230-401
Cow position: chr12:5906130-5905959 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 230-405
Cow position: chr12:25805055-25805230 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 14, 107

Conread position: 234-404
Cow position: chr12:30170738-30170570 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 15

Conread position: 235-366
Cow position: chr12:25177529-25177658 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 235-401
Cow position: chr12:30819313-30819146 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 0

Conread position: 237-372
Cow position: chr12:15641040-15641177 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 243-400
Cow position: chr12:35378262-35378105 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 53

Conread position: 243-406
Cow position: chr12:18518734-18518566 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 128, 0

Conread position: 244-384
Cow position: chr12:3092520-3092661 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 102
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 283-405
Cow position: chr12:18420901-18421024 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 287-404
Cow position: chr12:39486441-39486327 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 90
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 0

Show alignments to all cow chromosomes.