Cow genome map

Conread name: unkn-AR19A3

Conread position: 77-234
Cow position: chr20:38515058-38514904 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 0

Conread position: 77-400
Cow position: chr20:23870527-23870833 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 298, 82

Conread position: 78-331
Cow position: chr20:36023089-36023346 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 91, 160

Conread position: 81-193
Cow position: chr20:1009166-1009277 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 84-398
Cow position: chr20:9537430-9537126 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 199
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 64, 103

Conread position: 84-406
Cow position: chr20:40158181-40157882 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 205
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 85-356
Cow position: chr20:31798903-31799174 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 133, 149

Conread position: 96-406
Cow position: chr20:5827213-5826922 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 276, 69

Conread position: 99-405
Cow position: chr20:20056208-20056502 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 234, 65

Conread position: 101-406
Cow position: chr20:26723390-26723693 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 204
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 23

Conread position: 103-309
Cow position: chr20:32627289-32627083 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 127

Conread position: 103-405
Cow position: chr20:6890986-6890697 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 192
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 123, 82

Conread position: 116-400
Cow position: chr20:17846230-17845945 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 94

Conread position: 117-405
Cow position: chr20:10772460-10772186 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 120-338
Cow position: chr20:3780951-3781158 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 131-395
Cow position: chr20:2169476-2169731 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 168
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 133-406
Cow position: chr20:13983623-13983336 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 127

Conread position: 187-406
Cow position: chr20:22978523-22978307 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 191-406
Cow position: chr20:39266762-39266977 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 41, 128

Conread position: 192-400
Cow position: chr20:12995814-12996023 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 165, 41

Conread position: 193-399
Cow position: chr20:11043282-11043489 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 43

Conread position: 195-406
Cow position: chr20:22030506-22030301 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 7

Conread position: 195-406
Cow position: chr20:38514968-38514763 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 197-403
Cow position: chr20:23846482-23846685 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 24

Conread position: 201-397
Cow position: chr20:9412671-9412476 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 74, 32

Conread position: 204-366
Cow position: chr20:35444927-35445084 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 204-377
Cow position: chr20:26996710-26996539 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 204-403
Cow position: chr20:38090092-38089896 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 204-405
Cow position: chr20:12126125-12126322 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 204-406
Cow position: chr20:21815740-21815542 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 205-406
Cow position: chr20:8619969-8620175 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 30

Conread position: 205-406
Cow position: chr20:18320615-18320810 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 206-384
Cow position: chr20:15530039-15529861 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 20, 28

Conread position: 209-384
Cow position: chr20:7426023-7426194 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 209-395
Cow position: chr20:31740041-31740229 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 213-384
Cow position: chr20:8912326-8912497 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 118
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 129, 158

Conread position: 214-405
Cow position: chr20:2298619-2298807 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 174, 57

Conread position: 216-369
Cow position: chr20:15766280-15766127 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 146

Conread position: 216-405
Cow position: chr20:42166615-42166800 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 160, 17

Conread position: 224-366
Cow position: chr20:8817330-8817472 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 224-406
Cow position: chr20:12420458-12420638 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 225-359
Cow position: chr20:36312349-36312482 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 225-383
Cow position: chr20:3255196-3255041 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 8

Conread position: 225-384
Cow position: chr20:7738072-7738233 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 10

Conread position: 225-385
Cow position: chr20:20158295-20158136 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 225-396
Cow position: chr20:25009473-25009638 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 225-396
Cow position: chr20:32847504-32847333 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 8

Conread position: 225-398
Cow position: chr20:398148-398318 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr20:4786859-4787032 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 161, 8

Conread position: 225-406
Cow position: chr20:24069965-24069785 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 225-406
Cow position: chr20:28982860-28982680 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 149, 71

Conread position: 225-406
Cow position: chr20:39398640-39398467 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 225-407
Cow position: chr20:3148843-3148662 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 225-407
Cow position: chr20:7363121-7362945 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 226-384
Cow position: chr20:2819703-2819546 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 118

Conread position: 226-405
Cow position: chr20:8556111-8556288 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 226-406
Cow position: chr20:28605368-28605190 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 85, 0

Conread position: 226-411
Cow position: chr20:5702883-5702697 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 168, 144

Conread position: 227-406
Cow position: chr20:11550524-11550347 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 138, 77

Conread position: 228-372
Cow position: chr20:24097158-24097014 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 228-406
Cow position: chr20:18379535-18379357 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 150, 57

Conread position: 228-406
Cow position: chr20:38768306-38768475 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 74

Conread position: 229-384
Cow position: chr20:19459509-19459664 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 229-395
Cow position: chr20:12239527-12239692 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 74

Conread position: 229-401
Cow position: chr20:8547222-8547051 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 62

Conread position: 229-406
Cow position: chr20:7438693-7438872 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 230-405
Cow position: chr20:22065221-22065051 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 148, 97

Conread position: 230-406
Cow position: chr20:7756470-7756643 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 230-406
Cow position: chr20:12581799-12581975 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 230-406
Cow position: chr20:14807043-14806867 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 7, 141

Conread position: 230-406
Cow position: chr20:33363672-33363496 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 147, 13

Conread position: 234-401
Cow position: chr20:25161974-25162142 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 102, 0

Conread position: 234-406
Cow position: chr20:8308167-8308000 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 234-406
Cow position: chr20:8702760-8702936 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 97

Conread position: 234-406
Cow position: chr20:19363212-19363384 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 138, 28

Conread position: 234-406
Cow position: chr20:35710327-35710151 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 234-407
Cow position: chr20:11542136-11542303 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 25, 101

Conread position: 235-346
Cow position: chr20:630674-630564 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 235-383
Cow position: chr20:16935165-16935308 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 235-406
Cow position: chr20:8578399-8578229 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 235-406
Cow position: chr20:32463374-32463540 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 235-406
Cow position: chr20:39743460-39743287 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 236-405
Cow position: chr20:14620152-14620323 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 163

Conread position: 236-406
Cow position: chr20:23792753-23792591 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 0

Conread position: 237-373
Cow position: chr20:26077520-26077655 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 128, 0

Conread position: 238-406
Cow position: chr20:6358767-6358596 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 136, 127

Conread position: 239-401
Cow position: chr20:17100508-17100347 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 240-397
Cow position: chr20:11392922-11392772 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 243-405
Cow position: chr20:28441469-28441311 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 138, 0

Conread position: 250-404
Cow position: chr20:1009571-1009722 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 262-406
Cow position: chr20:15548773-15548919 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 264-406
Cow position: chr20:3606840-3606981 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 290-406
Cow position: chr20:35354727-35354842 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 87
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 0

Show alignments to all cow chromosomes.