Cow genome map

Conread name: unkn-AR19A3

Conread position: 71-261
Cow position: chr21:17790886-17791074 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 169, 68

Conread position: 74-331
Cow position: chr21:25159486-25159247 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 91

Conread position: 75-323
Cow position: chr21:11363990-11363750 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 226, 60

Conread position: 77-405
Cow position: chr21:5392215-5392535 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 242, 117

Conread position: 81-400
Cow position: chr21:10515121-10514812 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 100, 109

Conread position: 82-302
Cow position: chr21:652270-652473 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 88-406
Cow position: chr21:33351050-33350742 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 90-406
Cow position: chr21:13365642-13365342 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 278, 111

Conread position: 93-355
Cow position: chr21:44672048-44671796 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 174
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 179, 20

Conread position: 96-406
Cow position: chr21:20260026-20260319 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 0

Conread position: 98-403
Cow position: chr21:13488824-13488527 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 147, 84

Conread position: 101-404
Cow position: chr21:7268571-7268879 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 203
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 110, 214

Conread position: 101-406
Cow position: chr21:46264457-46264173 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 204
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 103-294
Cow position: chr21:15759525-15759711 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 143, 35

Conread position: 103-404
Cow position: chr21:42384800-42384514 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 198
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 48

Conread position: 108-324
Cow position: chr21:35569080-35569282 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 154-373
Cow position: chr21:396117-395901 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 15

Conread position: 171-405
Cow position: chr21:10633408-10633637 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 199, 63

Conread position: 189-358
Cow position: chr21:14228064-14228232 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 21

Conread position: 189-406
Cow position: chr21:44825670-44825889 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 141
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 111, 46

Conread position: 190-405
Cow position: chr21:27568958-27569168 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 43, 0

Conread position: 191-377
Cow position: chr21:11057668-11057848 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 191-405
Cow position: chr21:36795818-36795603 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 43

Conread position: 191-406
Cow position: chr21:7394075-7394283 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 22, 58

Conread position: 192-405
Cow position: chr21:47363521-47363735 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 130, 36

Conread position: 193-366
Cow position: chr21:7088815-7088640 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 193-398
Cow position: chr21:19359965-19360167 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 34, 0

Conread position: 193-406
Cow position: chr21:12801538-12801750 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 130, 34

Conread position: 194-377
Cow position: chr21:26245126-26244943 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 32, 40

Conread position: 194-397
Cow position: chr21:36682535-36682332 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 33

Conread position: 195-406
Cow position: chr21:30980367-30980576 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 31, 39

Conread position: 196-387
Cow position: chr21:9417948-9418136 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 38

Conread position: 196-395
Cow position: chr21:42841388-42841587 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 192, 8

Conread position: 197-405
Cow position: chr21:10004679-10004884 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 198-406
Cow position: chr21:29485184-29484981 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 181, 29

Conread position: 199-363
Cow position: chr21:5341888-5342051 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 204-395
Cow position: chr21:868722-868913 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 204-397
Cow position: chr21:22014390-22014197 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 169, 29

Conread position: 204-404
Cow position: chr21:9990708-9990514 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 204-406
Cow position: chr21:41522211-41522405 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 138
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 101

Conread position: 205-352
Cow position: chr21:15012638-15012493 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 206-406
Cow position: chr21:24858513-24858315 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 171, 21

Conread position: 206-406
Cow position: chr21:37299662-37299460 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 168, 0

Conread position: 210-406
Cow position: chr21:47719107-47719305 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 135
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 154, 33

Conread position: 214-395
Cow position: chr21:47464928-47465108 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 171, 19

Conread position: 214-406
Cow position: chr21:45262618-45262811 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 162, 0

Conread position: 216-367
Cow position: chr21:24875543-24875391 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 216-376
Cow position: chr21:12723342-12723185 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 88

Conread position: 216-405
Cow position: chr21:31691670-31691485 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 130
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 159, 22

Conread position: 216-406
Cow position: chr21:27229605-27229792 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 160, 40

Conread position: 224-406
Cow position: chr21:25764816-25764636 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 9

Conread position: 225-362
Cow position: chr21:16570079-16569945 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 225-370
Cow position: chr21:39393929-39393784 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 8

Conread position: 225-373
Cow position: chr21:802137-802284 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 225-376
Cow position: chr21:16498696-16498550 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 225-376
Cow position: chr21:46451774-46451922 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 225-383
Cow position: chr21:22851100-22850945 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 225-397
Cow position: chr21:19868775-19868946 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 145, 8

Conread position: 225-404
Cow position: chr21:33982629-33982802 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 225-404
Cow position: chr21:34654253-34654079 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr21:71767-71587 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 225-406
Cow position: chr21:641767-641588 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr21:643504-643326 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr21:829029-829210 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 26

Conread position: 225-406
Cow position: chr21:7169868-7169688 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 129, 8

Conread position: 225-406
Cow position: chr21:8349508-8349330 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 149, 8

Conread position: 225-406
Cow position: chr21:11644785-11644968 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 143, 0

Conread position: 225-406
Cow position: chr21:11739940-11740119 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr21:24598837-24598657 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 10

Conread position: 225-406
Cow position: chr21:28030468-28030290 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 225-406
Cow position: chr21:29069146-29069327 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 83, 8

Conread position: 225-406
Cow position: chr21:33264024-33263843 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 169, 18

Conread position: 225-406
Cow position: chr21:36297674-36297492 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 225-406
Cow position: chr21:37480145-37479955 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 8

Conread position: 225-406
Cow position: chr21:42135436-42135618 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 8

Conread position: 225-406
Cow position: chr21:48233985-48234160 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 8

Conread position: 226-364
Cow position: chr21:33210369-33210230 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 226-406
Cow position: chr21:41046985-41046806 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 151, 7

Conread position: 228-375
Cow position: chr21:17252801-17252947 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 228-406
Cow position: chr21:21615960-21615776 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 130, 0

Conread position: 229-406
Cow position: chr21:8426622-8426448 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 229-406
Cow position: chr21:41590388-41590564 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 165, 0

Conread position: 230-376
Cow position: chr21:20163884-20163739 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 230-406
Cow position: chr21:724703-724884 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 87

Conread position: 230-406
Cow position: chr21:32559188-32559359 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 126

Conread position: 232-372
Cow position: chr21:6851346-6851206 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 234-406
Cow position: chr21:38121273-38121101 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 235-406
Cow position: chr21:297925-297754 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 235-406
Cow position: chr21:742448-742287 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 237-403
Cow position: chr21:30222514-30222348 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 237-405
Cow position: chr21:44214295-44214127 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 140, 70

Conread position: 238-406
Cow position: chr21:47160386-47160219 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 0

Conread position: 243-406
Cow position: chr21:29213997-29214157 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 139, 0

Conread position: 244-406
Cow position: chr21:20183233-20183073 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 253-405
Cow position: chr21:12104519-12104367 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 57, 118

Conread position: 255-406
Cow position: chr21:16187656-16187807 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 256-411
Cow position: chr21:42540072-42540227 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 269-406
Cow position: chr21:46599498-46599361 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 278-406
Cow position: chr21:44515392-44515265 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 280-406
Cow position: chr21:17856670-17856544 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.