Cow genome map

Conread name: unkn-AR19A3

Conread position: 73-406
Cow position: chr27:26413552-26413235 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 75-400
Cow position: chr27:1789451-1789124 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 94, 161

Conread position: 75-406
Cow position: chr27:6014899-6015221 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 85, 0

Conread position: 79-340
Cow position: chr27:17919017-17918763 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 172
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 51, 104

Conread position: 79-405
Cow position: chr27:30988506-30988813 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 211
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 147, 81

Conread position: 82-406
Cow position: chr27:815069-815384 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 206
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 238, 77

Conread position: 83-344
Cow position: chr27:19823046-19823298 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 185, 88

Conread position: 83-400
Cow position: chr27:27270832-27270526 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 154, 80

Conread position: 88-406
Cow position: chr27:18767342-18767044 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 30, 117

Conread position: 89-406
Cow position: chr27:23482928-23483245 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 80, 107

Conread position: 90-336
Cow position: chr27:9697357-9697603 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 91, 127

Conread position: 94-406
Cow position: chr27:236999-237288 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 96-322
Cow position: chr27:26321422-26321638 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 97-238
Cow position: chr27:20790214-20790075 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 38

Conread position: 99-372
Cow position: chr27:16589971-16589716 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 71, 0

Conread position: 99-377
Cow position: chr27:27673306-27673026 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 92, 222

Conread position: 100-405
Cow position: chr27:15214947-15215250 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 197
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 153, 83

Conread position: 101-387
Cow position: chr27:20275305-20275592 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 179, 70

Conread position: 102-307
Cow position: chr27:26503148-26502937 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 22

Conread position: 102-406
Cow position: chr27:20758296-20758025 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 202
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 85

Conread position: 103-406
Cow position: chr27:26407446-26407147 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 202

Conread position: 104-394
Cow position: chr27:15343546-15343274 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 104-400
Cow position: chr27:536186-536477 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 181
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 262, 83

Conread position: 118-406
Cow position: chr27:20795542-20795811 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 189
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 267, 20

Conread position: 138-405
Cow position: chr27:30846421-30846676 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 166
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 170-353
Cow position: chr27:576053-576237 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 158, 68

Conread position: 188-383
Cow position: chr27:22569586-22569778 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 28

Conread position: 191-368
Cow position: chr27:22179961-22179787 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 43

Conread position: 193-372
Cow position: chr27:30489603-30489424 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 33, 41

Conread position: 193-401
Cow position: chr27:22348299-22348500 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 34

Conread position: 193-404
Cow position: chr27:4720305-4720096 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 16, 37

Conread position: 194-405
Cow position: chr27:19717721-19717941 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 194-406
Cow position: chr27:20093026-20092811 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 16

Conread position: 195-405
Cow position: chr27:4835799-4835586 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 195-406
Cow position: chr27:15378664-15378458 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 182, 48

Conread position: 197-363
Cow position: chr27:788985-788820 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 197-405
Cow position: chr27:29593815-29593611 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 198-405
Cow position: chr27:30407220-30407020 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 26

Conread position: 199-372
Cow position: chr27:6674096-6674264 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 199-375
Cow position: chr27:27460756-27460583 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 130, 34

Conread position: 199-405
Cow position: chr27:19660748-19660952 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 161, 29

Conread position: 204-400
Cow position: chr27:19508831-19509027 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 14, 30

Conread position: 204-406
Cow position: chr27:15668951-15668752 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 204-406
Cow position: chr27:16103634-16103826 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 204-406
Cow position: chr27:22220373-22220574 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 128
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 204-406
Cow position: chr27:27389204-27389000 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 32

Conread position: 209-372
Cow position: chr27:6106528-6106684 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 209-383
Cow position: chr27:23452287-23452461 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 159, 18

Conread position: 209-406
Cow position: chr27:15454036-15454233 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 176, 18

Conread position: 209-406
Cow position: chr27:24305261-24305456 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 167, 85

Conread position: 210-422
Cow position: chr27:28206627-28206835 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 209, 25

Conread position: 211-406
Cow position: chr27:20549886-20549689 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 131
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 212-404
Cow position: chr27:26915604-26915409 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 21

Conread position: 216-401
Cow position: chr27:22035548-22035362 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 122
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 224-405
Cow position: chr27:20641495-20641316 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 151, 28

Conread position: 224-406
Cow position: chr27:29504808-29504628 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 9

Conread position: 225-339
Cow position: chr27:11133927-11134039 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 225-346
Cow position: chr27:19576483-19576363 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 225-370
Cow position: chr27:15003140-15002994 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 0

Conread position: 225-376
Cow position: chr27:7412233-7412383 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 225-377
Cow position: chr27:14670543-14670391 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 225-377
Cow position: chr27:20068135-20067984 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 139, 86

Conread position: 225-384
Cow position: chr27:27055129-27055284 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 225-394
Cow position: chr27:26959775-26959610 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 8

Conread position: 225-400
Cow position: chr27:28478420-28478594 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 225-401
Cow position: chr27:20897181-20897010 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 225-401
Cow position: chr27:29597909-29597736 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 79

Conread position: 225-405
Cow position: chr27:19685874-19685694 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 225-406
Cow position: chr27:17397614-17397433 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 153, 8

Conread position: 225-406
Cow position: chr27:23485053-23485231 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 149, 8

Conread position: 225-406
Cow position: chr27:26643530-26643704 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 226-399
Cow position: chr27:31210390-31210559 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 0

Conread position: 227-428
Cow position: chr27:23560190-23559989 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 192, 141

Conread position: 228-384
Cow position: chr27:26238868-26239023 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 228-399
Cow position: chr27:8405977-8405814 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 228-406
Cow position: chr27:426812-426986 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 228-406
Cow position: chr27:23108058-23107883 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 145, 92

Conread position: 228-406
Cow position: chr27:24321032-24321204 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 229-401
Cow position: chr27:4944671-4944500 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 141, 0

Conread position: 229-406
Cow position: chr27:4672855-4673037 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 229-406
Cow position: chr27:20828866-20828690 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 229-406
Cow position: chr27:22171143-22171318 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 150, 75

Conread position: 230-370
Cow position: chr27:7343584-7343444 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 20

Conread position: 230-403
Cow position: chr27:21669272-21669104 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 230-406
Cow position: chr27:15409192-15409016 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 232-399
Cow position: chr27:24014893-24014726 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 234-406
Cow position: chr27:1122880-1123049 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 235-377
Cow position: chr27:8353328-8353467 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 235-400
Cow position: chr27:23890787-23890951 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 135, 0

Conread position: 235-401
Cow position: chr27:16284325-16284490 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 129, 15

Conread position: 235-406
Cow position: chr27:16478487-16478321 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 133, 69

Conread position: 235-406
Cow position: chr27:19387868-19388032 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 237-404
Cow position: chr27:20628920-20629078 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 116, 0

Conread position: 237-406
Cow position: chr27:26150869-26151041 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 238-412
Cow position: chr27:20553584-20553752 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 168, 112

Conread position: 250-406
Cow position: chr27:4813019-4812862 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 0

Conread position: 256-403
Cow position: chr27:16625770-16625913 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 269-432
Cow position: chr27:21130189-21130354 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 39

Show alignments to all cow chromosomes.