Cow genome map
| Conread name: | unkn-AR19A3 |
| Conread position: | 67-406 |
| Cow position: | chr3:1785009-1785329 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 38, 111 |
| Conread position: | 74-366 |
| Cow position: | chr3:57760726-57760450 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 74-403 |
| Cow position: | chr3:81371888-81371563 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 95, 60 |
| Conread position: | 78-376 |
| Cow position: | chr3:53508843-53508553 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 81-226 |
| Cow position: | chr3:77173292-77173437 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 83-373 |
| Cow position: | chr3:82629550-82629261 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 84-340 |
| Cow position: | chr3:78201842-78201588 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 84-406 |
| Cow position: | chr3:55271800-55272132 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 161 |
| Conread position: | 86-326 |
| Cow position: | chr3:28555928-28556170 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 89, 150 |
| Conread position: | 86-368 |
| Cow position: | chr3:58940356-58940076 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 117, 74 |
| Conread position: | 86-383 |
| Cow position: | chr3:9588429-9588708 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 285, 55 |
| Conread position: | 86-397 |
| Cow position: | chr3:70565522-70565814 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 88-328 |
| Cow position: | chr3:67995128-67994911 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 89-253 |
| Cow position: | chr3:47725941-47726103 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 90-371 |
| Cow position: | chr3:59209015-59208751 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 91-393 |
| Cow position: | chr3:73442869-73443162 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 99, 42 |
| Conread position: | 92-350 |
| Cow position: | chr3:24372140-24371890 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 92-355 |
| Cow position: | chr3:57877788-57877529 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 93-405 |
| Cow position: | chr3:2680722-2680433 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 93-405 |
| Cow position: | chr3:63177706-63177394 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 20 |
| Conread position: | 94-398 |
| Cow position: | chr3:59621425-59621724 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 96-405 |
| Cow position: | chr3:17934724-17935024 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 96-406 |
| Cow position: | chr3:62788973-62789265 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 217, 45 |
| Conread position: | 98-211 |
| Cow position: | chr3:31828603-31828717 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 98-405 |
| Cow position: | chr3:10677432-10677723 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 135, 66 |
| Conread position: | 98-429 |
| Cow position: | chr3:7428216-7427891 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 99-317 |
| Cow position: | chr3:16177034-16177246 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 99-405 |
| Cow position: | chr3:17447400-17447696 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 101-405 |
| Cow position: | chr3:30222389-30222103 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 217, 38 |
| Conread position: | 102-403 |
| Cow position: | chr3:44330231-44330521 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 16, 10 |
| Conread position: | 104-385 |
| Cow position: | chr3:6519762-6520028 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 106-297 |
| Cow position: | chr3:62622981-62623175 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 56, 126 |
| Conread position: | 125-406 |
| Cow position: | chr3:74243183-74242908 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 224, 90 |
| Conread position: | 139-406 |
| Cow position: | chr3:13507645-13507379 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 227, 88 |
| Conread position: | 158-386 |
| Cow position: | chr3:20334170-20333939 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 158-407 |
| Cow position: | chr3:73461119-73460877 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 218, 16 |
| Conread position: | 166-406 |
| Cow position: | chr3:26874743-26874507 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 70, 158 |
| Conread position: | 170-401 |
| Cow position: | chr3:80072276-80072046 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 186-377 |
| Cow position: | chr3:21997652-21997846 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 52, 188 |
| Conread position: | 189-406 |
| Cow position: | chr3:47753353-47753138 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 191-371 |
| Cow position: | chr3:64648617-64648439 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 193-400 |
| Cow position: | chr3:35621427-35621223 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 133 |
| Conread position: | 193-406 |
| Cow position: | chr3:2068021-2067807 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 33, 203 |
| Conread position: | 193-406 |
| Cow position: | chr3:15506572-15506360 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 193, 40 |
| Conread position: | 193-406 |
| Cow position: | chr3:22716171-22716387 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 193-406 |
| Cow position: | chr3:70900015-70899809 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 33, 41 |
| Conread position: | 194-352 |
| Cow position: | chr3:11705376-11705217 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 42, 22 |
| Conread position: | 194-365 |
| Cow position: | chr3:5305917-5305751 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 194-392 |
| Cow position: | chr3:55984220-55984024 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 192, 33 |
| Conread position: | 196-406 |
| Cow position: | chr3:15173203-15172992 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 38 |
| Conread position: | 197-406 |
| Cow position: | chr3:55189638-55189842 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 199-406 |
| Cow position: | chr3:74134821-74134614 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 158, 28 |
| Conread position: | 200-364 |
| Cow position: | chr3:68156842-68156676 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 200-406 |
| Cow position: | chr3:32409329-32409125 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 201-365 |
| Cow position: | chr3:26603435-26603602 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 201-406 |
| Cow position: | chr3:11987447-11987243 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 201-406 |
| Cow position: | chr3:70762011-70762208 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 176, 13 |
| Conread position: | 202-406 |
| Cow position: | chr3:22232537-22232737 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 202-406 |
| Cow position: | chr3:69785507-69785712 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 35, 184 |
| Conread position: | 203-406 |
| Cow position: | chr3:78092399-78092599 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 204-372 |
| Cow position: | chr3:9120954-9120791 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 204-394 |
| Cow position: | chr3:16752147-16752334 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 204-395 |
| Cow position: | chr3:23132059-23132246 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 204-405 |
| Cow position: | chr3:4319826-4319627 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 164 |
| Conread position: | 204-406 |
| Cow position: | chr3:79196872-79196672 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 205-401 |
| Cow position: | chr3:4481053-4480859 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 206-406 |
| Cow position: | chr3:19626400-19626595 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 173, 22 |
| Conread position: | 209-383 |
| Cow position: | chr3:49363217-49363044 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 209-401 |
| Cow position: | chr3:31361532-31361337 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 113, 18 |
| Conread position: | 209-403 |
| Cow position: | chr3:59299681-59299493 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 18 |
| Conread position: | 209-405 |
| Cow position: | chr3:48072775-48072966 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 209-405 |
| Cow position: | chr3:53222120-53221929 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 209-406 |
| Cow position: | chr3:3316707-3316898 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 209-406 |
| Cow position: | chr3:23168957-23169152 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 167, 109 |
| Conread position: | 210-406 |
| Cow position: | chr3:23105256-23105451 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 162, 18 |
| Conread position: | 210-406 |
| Cow position: | chr3:54290406-54290601 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 210-406 |
| Cow position: | chr3:54506813-54506618 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 163, 24 |
| Conread position: | 213-364 |
| Cow position: | chr3:41652481-41652330 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 213-366 |
| Cow position: | chr3:51349927-51349775 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 213-400 |
| Cow position: | chr3:56476786-56476599 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 161, 20 |
| Conread position: | 214-366 |
| Cow position: | chr3:16505375-16505523 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 214-407 |
| Cow position: | chr3:58968799-58968986 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 215-371 |
| Cow position: | chr3:62826517-62826676 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 107, 20 |
| Conread position: | 215-406 |
| Cow position: | chr3:13353465-13353276 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 37, 90 |
| Conread position: | 215-406 |
| Cow position: | chr3:78077292-78077104 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 216-369 |
| Cow position: | chr3:53083884-53084039 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 216-386 |
| Cow position: | chr3:18607772-18607602 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-406 |
| Cow position: | chr3:83815688-83815875 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 224-363 |
| Cow position: | chr3:50593821-50593957 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 225-349 |
| Cow position: | chr3:35239104-35238982 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 225-365 |
| Cow position: | chr3:38100235-38100094 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 68, 8 |
| Conread position: | 225-366 |
| Cow position: | chr3:75107866-75107726 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-369 |
| Cow position: | chr3:44960913-44961055 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-372 |
| Cow position: | chr3:3947131-3946984 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 225-372 |
| Cow position: | chr3:68004610-68004756 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-377 |
| Cow position: | chr3:53428825-53428974 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-397 |
| Cow position: | chr3:61224650-61224824 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 26, 8 |
| Conread position: | 225-401 |
| Cow position: | chr3:3478163-3478337 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 39, 8 |
| Conread position: | 225-404 |
| Cow position: | chr3:23408266-23408435 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-404 |
| Cow position: | chr3:60264624-60264801 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-404 |
| Cow position: | chr3:75080852-75080684 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-404 |
| Cow position: | chr3:82019747-82019926 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 151, 8 |
| Conread position: | 225-405 |
| Cow position: | chr3:3738573-3738403 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-405 |
| Cow position: | chr3:44932605-44932428 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 153, 11 |
| Conread position: | 225-405 |
| Cow position: | chr3:52608274-52608095 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-405 |
| Cow position: | chr3:68616238-68616411 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 143, 8 |
| Conread position: | 225-406 |
| Cow position: | chr3:7337692-7337869 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:10958148-10958328 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:17222047-17222231 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:20677750-20677920 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:22165324-22165503 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:26218961-26219137 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:38864219-38864030 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:39969770-39969951 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 225-406 |
| Cow position: | chr3:50768772-50768597 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:53150423-53150243 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 8 |
| Conread position: | 225-406 |
| Cow position: | chr3:54946223-54946043 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 225-406 |
| Cow position: | chr3:56059903-56059722 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 147, 8 |
| Conread position: | 225-406 |
| Cow position: | chr3:71474313-71474494 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 163, 8 |
| Conread position: | 225-406 |
| Cow position: | chr3:83474837-83474656 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 108, 8 |
| Conread position: | 226-406 |
| Cow position: | chr3:116282-116107 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 35, 140 |
| Conread position: | 226-406 |
| Cow position: | chr3:70609718-70609539 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 148, 66 |
| Conread position: | 228-377 |
| Cow position: | chr3:49344783-49344634 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-401 |
| Cow position: | chr3:19585953-19585781 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 228-406 |
| Cow position: | chr3:8061216-8061042 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 228-406 |
| Cow position: | chr3:15950823-15950997 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 228-406 |
| Cow position: | chr3:59604933-59604759 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 228-406 |
| Cow position: | chr3:74601204-74601026 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 228-430 |
| Cow position: | chr3:64196916-64196716 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 229-406 |
| Cow position: | chr3:3472129-3471952 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 117 |
| Conread position: | 229-406 |
| Cow position: | chr3:12705455-12705631 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 229-406 |
| Cow position: | chr3:19682786-19682606 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 229-406 |
| Cow position: | chr3:59610629-59610806 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 147, 170 |
| Conread position: | 229-406 |
| Cow position: | chr3:80565055-80564878 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 158, 123 |
| Conread position: | 230-346 |
| Cow position: | chr3:16601530-16601414 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-403 |
| Cow position: | chr3:10668791-10668962 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 32, 77 |
| Conread position: | 230-404 |
| Cow position: | chr3:73237284-73237110 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 230-405 |
| Cow position: | chr3:67704635-67704458 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 230-406 |
| Cow position: | chr3:525434-525259 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 146, 124 |
| Conread position: | 230-406 |
| Cow position: | chr3:9641656-9641480 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 151 |
| Conread position: | 230-406 |
| Cow position: | chr3:10347443-10347270 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 230-406 |
| Cow position: | chr3:76922575-76922748 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 138, 115 |
| Conread position: | 233-405 |
| Cow position: | chr3:74079552-74079723 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 143, 63 |
| Conread position: | 233-406 |
| Cow position: | chr3:3883731-3883904 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 152, 36 |
| Conread position: | 234-387 |
| Cow position: | chr3:68707929-68708077 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 234-398 |
| Cow position: | chr3:53739101-53739263 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 234-406 |
| Cow position: | chr3:17936754-17936926 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 12, 161 |
| Conread position: | 234-406 |
| Cow position: | chr3:59799332-59799162 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 38 |
| Conread position: | 234-406 |
| Cow position: | chr3:64135802-64135629 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 234-406 |
| Cow position: | chr3:74584291-74584128 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 234-406 |
| Cow position: | chr3:79093959-79094133 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 132, 62 |
| Conread position: | 235-406 |
| Cow position: | chr3:49328026-49327856 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 235-406 |
| Cow position: | chr3:55177663-55177836 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 236-406 |
| Cow position: | chr3:74533431-74533263 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 237-405 |
| Cow position: | chr3:55109532-55109701 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 237-406 |
| Cow position: | chr3:75608579-75608411 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 140, 76 |
| Conread position: | 238-377 |
| Cow position: | chr3:71703555-71703419 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 238-405 |
| Cow position: | chr3:31350024-31350190 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 246-406 |
| Cow position: | chr3:70896120-70895961 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 250-406 |
| Cow position: | chr3:70614419-70614572 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 255-406 |
| Cow position: | chr3:12670552-12670701 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 256-403 |
| Cow position: | chr3:478738-478883 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 48 |
Show alignments to all cow chromosomes.