Cow genome map
Conread name: | unkn-IIU602653792.R1 |
Conread position: | 1-251 |
Cow position: | chr11:4063138-4063389 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 184 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 102, 58 |
Conread position: | 1-254 |
Cow position: | chr11:26548242-26547978 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 197 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 1-265 |
Cow position: | chr11:1489415-1489686 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 198 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 94, 146 |
Conread position: | 1-364 |
Cow position: | chr11:10848182-10847827 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 207 |
Conread position: | 1-368 |
Cow position: | chr11:9216354-9216705 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 253 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 84, 26 |
Conread position: | 1-368 |
Cow position: | chr11:9733942-9734299 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 268 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 73, 22 |
Conread position: | 1-368 |
Cow position: | chr11:11988857-11988485 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 221 |
Conread position: | 1-368 |
Cow position: | chr11:19101764-19102123 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 207 |
Conread position: | 1-368 |
Cow position: | chr11:24394044-24393692 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 43 |
Conread position: | 1-368 |
Cow position: | chr11:26124195-26124554 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 207 |
Conread position: | 1-368 |
Cow position: | chr11:29667876-29668236 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 265 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 207 |
Conread position: | 1-368 |
Cow position: | chr11:41169964-41170323 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 207 |
Conread position: | 1-368 |
Cow position: | chr11:43513901-43514260 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 201 |
Conread position: | 1-368 |
Cow position: | chr11:44156516-44156873 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 207 |
Conread position: | 1-368 |
Cow position: | chr11:53431327-53431686 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 207 |
Conread position: | 1-368 |
Cow position: | chr11:71330322-71329965 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 159 |
Conread position: | 1-369 |
Cow position: | chr11:38834704-38835063 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 203 |
Conread position: | 4-368 |
Cow position: | chr11:12357687-12358044 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 205 |
Conread position: | 4-368 |
Cow position: | chr11:44252524-44252172 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 253 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 93, 133 |
Conread position: | 4-368 |
Cow position: | chr11:58135122-58134766 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 204 |
Conread position: | 7-257 |
Cow position: | chr11:3855959-3855698 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 184 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 7-267 |
Cow position: | chr11:45654294-45654561 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 181 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 119, 16 |
Conread position: | 7-270 |
Cow position: | chr11:37476276-37476549 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 193 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 88, 22 |
Conread position: | 7-364 |
Cow position: | chr11:17106960-17107310 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 257 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 88, 153 |
Conread position: | 7-364 |
Cow position: | chr11:19063347-19063696 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 205 |
Conread position: | 7-364 |
Cow position: | chr11:20733516-20733865 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 153 |
Conread position: | 7-364 |
Cow position: | chr11:52420123-52419767 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 250 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 40, 159 |
Conread position: | 7-367 |
Cow position: | chr11:31874062-31874405 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 248 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 84, 139 |
Conread position: | 7-368 |
Cow position: | chr11:4056751-4057104 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 261 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 209 |
Conread position: | 7-368 |
Cow position: | chr11:5342194-5342549 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 155 |
Conread position: | 7-368 |
Cow position: | chr11:15984360-15983998 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 214 |
Conread position: | 7-368 |
Cow position: | chr11:28108862-28108509 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 153 |
Conread position: | 7-368 |
Cow position: | chr11:32452552-32452200 (view UCSC Genome Browser custom track) |
Alignm length: | 375 |
Alignm identity: | 260 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 67, 154 |
Conread position: | 7-368 |
Cow position: | chr11:36743452-36743808 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 252 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 67, 155 |
Conread position: | 7-368 |
Cow position: | chr11:63654612-63654964 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 152 |
Conread position: | 7-368 |
Cow position: | chr11:64081357-64081710 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 153 |
Conread position: | 7-368 |
Cow position: | chr11:67451219-67450865 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 130 |
Conread position: | 7-368 |
Cow position: | chr11:67845840-67846196 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 250 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 60, 160 |
Conread position: | 7-368 |
Cow position: | chr11:73478034-73477681 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 153 |
Conread position: | 8-364 |
Cow position: | chr11:20511119-20510773 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 252 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 89, 258 |
Conread position: | 8-368 |
Cow position: | chr11:3493718-3493367 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 58 |
Conread position: | 9-368 |
Cow position: | chr11:1495365-1495717 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 198 |
Conread position: | 10-271 |
Cow position: | chr11:18887579-18887318 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 182 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 40, 51 |
Conread position: | 10-357 |
Cow position: | chr11:28229033-28229372 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 241 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 13, 114 |
Conread position: | 10-367 |
Cow position: | chr11:31926891-31926546 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 250 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 93, 66 |
Conread position: | 10-368 |
Cow position: | chr11:47759561-47759905 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 198 |
Conread position: | 13-270 |
Cow position: | chr11:40775291-40775549 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 193 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 35, 186 |
Conread position: | 13-364 |
Cow position: | chr11:12094285-12093943 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 100 |
Conread position: | 13-368 |
Cow position: | chr11:10091398-10091052 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 257 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 195 |
Conread position: | 23-368 |
Cow position: | chr11:23878004-23877668 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 185 |
Conread position: | 26-368 |
Cow position: | chr11:71981823-71982151 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 241 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 69, 30 |
Conread position: | 28-270 |
Cow position: | chr11:9601628-9601881 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 187 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 47, 37 |
Conread position: | 29-369 |
Cow position: | chr11:33193854-33194187 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 117 |
Conread position: | 37-368 |
Cow position: | chr11:53286470-53286792 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 58, 39 |
Conread position: | 51-368 |
Cow position: | chr11:76373539-76373843 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 227 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 49, 29 |
Conread position: | 55-331 |
Cow position: | chr11:28391319-28391052 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 187 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 51, 162 |
Conread position: | 70-368 |
Cow position: | chr11:4026898-4027187 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 219 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 27, 197 |
Conread position: | 111-364 |
Cow position: | chr11:32480557-32480801 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 177 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 39, 48 |
Show alignments to all cow chromosomes.