Cow genome map

Conread name: unkn-IIU602653792.R1

Conread position: 1-251
Cow position: chr11:4063138-4063389 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 102, 58

Conread position: 1-254
Cow position: chr11:26548242-26547978 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 96, 0

Conread position: 1-265
Cow position: chr11:1489415-1489686 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 198
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 94, 146

Conread position: 1-364
Cow position: chr11:10848182-10847827 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 207

Conread position: 1-368
Cow position: chr11:9216354-9216705 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 26

Conread position: 1-368
Cow position: chr11:9733942-9734299 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 268
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 73, 22

Conread position: 1-368
Cow position: chr11:11988857-11988485 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 221

Conread position: 1-368
Cow position: chr11:19101764-19102123 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 207

Conread position: 1-368
Cow position: chr11:24394044-24393692 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 43

Conread position: 1-368
Cow position: chr11:26124195-26124554 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 207

Conread position: 1-368
Cow position: chr11:29667876-29668236 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 207

Conread position: 1-368
Cow position: chr11:41169964-41170323 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 207

Conread position: 1-368
Cow position: chr11:43513901-43514260 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 201

Conread position: 1-368
Cow position: chr11:44156516-44156873 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 207

Conread position: 1-368
Cow position: chr11:53431327-53431686 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 207

Conread position: 1-368
Cow position: chr11:71330322-71329965 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 159

Conread position: 1-369
Cow position: chr11:38834704-38835063 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 203

Conread position: 4-368
Cow position: chr11:12357687-12358044 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 205

Conread position: 4-368
Cow position: chr11:44252524-44252172 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 93, 133

Conread position: 4-368
Cow position: chr11:58135122-58134766 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 204

Conread position: 7-257
Cow position: chr11:3855959-3855698 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 7-267
Cow position: chr11:45654294-45654561 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 181
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 16

Conread position: 7-270
Cow position: chr11:37476276-37476549 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 88, 22

Conread position: 7-364
Cow position: chr11:17106960-17107310 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 88, 153

Conread position: 7-364
Cow position: chr11:19063347-19063696 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 205

Conread position: 7-364
Cow position: chr11:20733516-20733865 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 7-364
Cow position: chr11:52420123-52419767 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 159

Conread position: 7-367
Cow position: chr11:31874062-31874405 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 248
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 84, 139

Conread position: 7-368
Cow position: chr11:4056751-4057104 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 209

Conread position: 7-368
Cow position: chr11:5342194-5342549 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 155

Conread position: 7-368
Cow position: chr11:15984360-15983998 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 214

Conread position: 7-368
Cow position: chr11:28108862-28108509 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 7-368
Cow position: chr11:32452552-32452200 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 67, 154

Conread position: 7-368
Cow position: chr11:36743452-36743808 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 67, 155

Conread position: 7-368
Cow position: chr11:63654612-63654964 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 152

Conread position: 7-368
Cow position: chr11:64081357-64081710 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 7-368
Cow position: chr11:67451219-67450865 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 130

Conread position: 7-368
Cow position: chr11:67845840-67846196 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 60, 160

Conread position: 7-368
Cow position: chr11:73478034-73477681 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 153

Conread position: 8-364
Cow position: chr11:20511119-20510773 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 252
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 89, 258

Conread position: 8-368
Cow position: chr11:3493718-3493367 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 58

Conread position: 9-368
Cow position: chr11:1495365-1495717 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 198

Conread position: 10-271
Cow position: chr11:18887579-18887318 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 182
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 51

Conread position: 10-357
Cow position: chr11:28229033-28229372 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 13, 114

Conread position: 10-367
Cow position: chr11:31926891-31926546 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 93, 66

Conread position: 10-368
Cow position: chr11:47759561-47759905 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 198

Conread position: 13-270
Cow position: chr11:40775291-40775549 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 193
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 35, 186

Conread position: 13-364
Cow position: chr11:12094285-12093943 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 100

Conread position: 13-368
Cow position: chr11:10091398-10091052 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 195

Conread position: 23-368
Cow position: chr11:23878004-23877668 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 185

Conread position: 26-368
Cow position: chr11:71981823-71982151 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 69, 30

Conread position: 28-270
Cow position: chr11:9601628-9601881 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 47, 37

Conread position: 29-369
Cow position: chr11:33193854-33194187 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 117

Conread position: 37-368
Cow position: chr11:53286470-53286792 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 58, 39

Conread position: 51-368
Cow position: chr11:76373539-76373843 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 227
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 49, 29

Conread position: 55-331
Cow position: chr11:28391319-28391052 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 162

Conread position: 70-368
Cow position: chr11:4026898-4027187 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 27, 197

Conread position: 111-364
Cow position: chr11:32480557-32480801 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 48

Show alignments to all cow chromosomes.