Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-247 |
| Cow position: | chr14:34776890-34776638 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 1-254 |
| Cow position: | chr14:38530785-38531048 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 102, 148 |
| Conread position: | 1-254 |
| Cow position: | chr14:44552553-44552289 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 1-254 |
| Cow position: | chr14:48253637-48253901 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-270 |
| Cow position: | chr14:32447467-32447190 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 97, 160 |
| Conread position: | 1-270 |
| Cow position: | chr14:35385399-35385676 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 94, 138 |
| Conread position: | 1-270 |
| Cow position: | chr14:37455391-37455665 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 164, 37 |
| Conread position: | 1-270 |
| Cow position: | chr14:50111463-50111186 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 99, 160 |
| Conread position: | 1-346 |
| Cow position: | chr14:12742393-12742730 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-346 |
| Cow position: | chr14:15275559-15275891 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 1-357 |
| Cow position: | chr14:44582027-44581680 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 142 |
| Conread position: | 1-363 |
| Cow position: | chr14:33237698-33237348 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 1-364 |
| Cow position: | chr14:16272622-16272977 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-364 |
| Cow position: | chr14:17000385-17000740 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-364 |
| Cow position: | chr14:44131558-44131219 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 95, 88 |
| Conread position: | 1-368 |
| Cow position: | chr14:190642-190282 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 201 |
| Conread position: | 1-368 |
| Cow position: | chr14:5529745-5529383 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 210 |
| Conread position: | 1-368 |
| Cow position: | chr14:7473031-7472680 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 258 |
| Conread position: | 1-368 |
| Cow position: | chr14:16919043-16919399 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-368 |
| Cow position: | chr14:17686073-17685714 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 201 |
| Conread position: | 1-368 |
| Cow position: | chr14:19327593-19327953 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 209 |
| Conread position: | 1-368 |
| Cow position: | chr14:20783132-20782777 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 9 |
| Conread position: | 1-368 |
| Cow position: | chr14:37224865-37224506 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-368 |
| Cow position: | chr14:45711048-45711400 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 4-334 |
| Cow position: | chr14:45189107-45189430 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 204 |
| Conread position: | 4-368 |
| Cow position: | chr14:40341722-40341371 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 91, 195 |
| Conread position: | 5-254 |
| Cow position: | chr14:13274270-13274013 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 157, 97 |
| Conread position: | 7-270 |
| Cow position: | chr14:44676783-44676513 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 7-270 |
| Cow position: | chr14:48825954-48825677 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 7-329 |
| Cow position: | chr14:33677732-33677416 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 49, 260 |
| Conread position: | 7-344 |
| Cow position: | chr14:44689723-44689395 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 152 |
| Conread position: | 7-346 |
| Cow position: | chr14:46465988-46465661 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 94, 124 |
| Conread position: | 7-353 |
| Cow position: | chr14:33393119-33393457 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-357 |
| Cow position: | chr14:44286584-44286922 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 7-357 |
| Cow position: | chr14:44288488-44288826 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 93, 13 |
| Conread position: | 7-363 |
| Cow position: | chr14:17490791-17491139 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-364 |
| Cow position: | chr14:9046243-9045886 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-364 |
| Cow position: | chr14:35916924-35917284 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 7-368 |
| Cow position: | chr14:2285006-2284653 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 205 |
| Conread position: | 7-368 |
| Cow position: | chr14:12611118-12610765 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 168 |
| Conread position: | 7-368 |
| Cow position: | chr14:13620483-13620834 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 188 |
| Conread position: | 7-368 |
| Cow position: | chr14:13863429-13863775 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 88, 170 |
| Conread position: | 7-368 |
| Cow position: | chr14:29047019-29047370 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 7-368 |
| Cow position: | chr14:44378466-44378118 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 88, 139 |
| Conread position: | 7-368 |
| Cow position: | chr14:45671379-45671732 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 9-368 |
| Cow position: | chr14:30584292-30584641 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 10-337 |
| Cow position: | chr14:38147674-38147348 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 61, 192 |
| Conread position: | 10-367 |
| Cow position: | chr14:17760215-17760560 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 87, 138 |
| Conread position: | 14-254 |
| Cow position: | chr14:33674075-33673831 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 89, 52 |
| Conread position: | 76-364 |
| Cow position: | chr14:45206923-45206642 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 131 |
Show alignments to all cow chromosomes.