Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-270 |
| Cow position: | chr15:4672111-4671830 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 1-270 |
| Cow position: | chr15:5981024-5980744 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-343 |
| Cow position: | chr15:31359553-31359225 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 1-357 |
| Cow position: | chr15:36625595-36625941 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 266 |
| Conread position: | 1-363 |
| Cow position: | chr15:2214219-2214577 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 143, 33 |
| Conread position: | 1-364 |
| Cow position: | chr15:3889554-3889200 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 218 |
| Conread position: | 1-364 |
| Cow position: | chr15:44070603-44070250 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 96, 34 |
| Conread position: | 1-367 |
| Cow position: | chr15:21665070-21665427 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 214 |
| Conread position: | 1-368 |
| Cow position: | chr15:524183-524540 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr15:3260642-3261001 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 200 |
| Conread position: | 1-368 |
| Cow position: | chr15:4386436-4386077 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 265 |
| Conread position: | 1-368 |
| Cow position: | chr15:7837926-7837566 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr15:18332153-18332509 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 261 |
| Conread position: | 1-368 |
| Cow position: | chr15:18577387-18577033 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 203 |
| Conread position: | 1-368 |
| Cow position: | chr15:19737373-19737733 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr15:20356245-20356598 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 107, 102 |
| Conread position: | 1-368 |
| Cow position: | chr15:24295774-24295417 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 96, 265 |
| Conread position: | 1-368 |
| Cow position: | chr15:32493711-32494067 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-368 |
| Cow position: | chr15:35646996-35647350 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 1-368 |
| Cow position: | chr15:35752642-35752998 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 96, 266 |
| Conread position: | 1-368 |
| Cow position: | chr15:53136544-53136903 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 207 |
| Conread position: | 4-344 |
| Cow position: | chr15:8811352-8811683 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 72 |
| Conread position: | 4-345 |
| Cow position: | chr15:21450342-21450004 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 65, 231 |
| Conread position: | 4-368 |
| Cow position: | chr15:315186-315538 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 4-368 |
| Cow position: | chr15:6155270-6155626 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 4-368 |
| Cow position: | chr15:15346441-15346797 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 4-368 |
| Cow position: | chr15:51218277-51217921 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 204 |
| Conread position: | 7-252 |
| Cow position: | chr15:17293732-17293492 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 159, 72 |
| Conread position: | 7-270 |
| Cow position: | chr15:10889283-10889013 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 7-362 |
| Cow position: | chr15:14581690-14582035 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 7-363 |
| Cow position: | chr15:580106-579763 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 65 |
| Conread position: | 7-363 |
| Cow position: | chr15:1238348-1238004 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 104 |
| Conread position: | 7-364 |
| Cow position: | chr15:1773168-1772819 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 245 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 88, 206 |
| Conread position: | 7-364 |
| Cow position: | chr15:4197132-4196783 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-364 |
| Cow position: | chr15:11597338-11597686 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 7-364 |
| Cow position: | chr15:20750060-20749711 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr15:1518484-1518836 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr15:4142148-4142501 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr15:4962304-4961955 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 257 |
| Conread position: | 7-368 |
| Cow position: | chr15:6471257-6471602 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 7-368 |
| Cow position: | chr15:6553164-6553504 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 90, 68 |
| Conread position: | 7-368 |
| Cow position: | chr15:6591944-6592300 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 39, 263 |
| Conread position: | 7-368 |
| Cow position: | chr15:18267310-18267670 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 251 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 7-368 |
| Cow position: | chr15:44829471-44829117 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 88, 259 |
| Conread position: | 7-368 |
| Cow position: | chr15:50123267-50123625 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 252 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 59, 159 |
| Conread position: | 8-367 |
| Cow position: | chr15:445276-444923 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 69, 153 |
| Conread position: | 9-254 |
| Cow position: | chr15:7234925-7234676 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 9-364 |
| Cow position: | chr15:6079419-6079073 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 252 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 87, 21 |
| Conread position: | 10-346 |
| Cow position: | chr15:4765844-4765516 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 198 |
| Conread position: | 13-345 |
| Cow position: | chr15:17217594-17217920 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 255 |
| Conread position: | 17-249 |
| Cow position: | chr15:8100130-8099888 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 19-368 |
| Cow position: | chr15:4686255-4685917 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 246 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 78, 38 |
| Conread position: | 33-318 |
| Cow position: | chr15:6485231-6484940 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 64, 228 |
| Conread position: | 46-270 |
| Cow position: | chr15:7965316-7965551 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 46-366 |
| Cow position: | chr15:6368327-6368637 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 52, 161 |
| Conread position: | 47-341 |
| Cow position: | chr15:1300177-1300460 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 56, 13 |
| Conread position: | 63-368 |
| Cow position: | chr15:3009239-3009535 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 66-348 |
| Cow position: | chr15:2588877-2589151 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 29, 155 |
| Conread position: | 66-364 |
| Cow position: | chr15:7934940-7934651 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 66-364 |
| Cow position: | chr15:17079599-17079884 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 29, 195 |
| Conread position: | 66-368 |
| Cow position: | chr15:1782834-1782540 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 78-368 |
| Cow position: | chr15:368568-368855 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 81-361 |
| Cow position: | chr15:57081-56805 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 100-368 |
| Cow position: | chr15:37393068-37392812 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 105-368 |
| Cow position: | chr15:9430511-9430258 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 128-368 |
| Cow position: | chr15:36971465-36971234 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 79 |
| Conread position: | 138-368 |
| Cow position: | chr15:31862024-31862245 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 90 |
Show alignments to all cow chromosomes.