Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-254 |
| Cow position: | chr17:13705450-13705200 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 74, 204 |
| Conread position: | 1-269 |
| Cow position: | chr17:40805714-40805436 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 204 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 98, 269 |
| Conread position: | 1-336 |
| Cow position: | chr17:251066-250738 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 1-364 |
| Cow position: | chr17:14895061-14894711 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 261 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 161, 88 |
| Conread position: | 1-368 |
| Cow position: | chr17:2580522-2580169 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 1-368 |
| Cow position: | chr17:3641930-3642286 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-368 |
| Cow position: | chr17:6260762-6260396 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-368 |
| Cow position: | chr17:15324734-15324375 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 208 |
| Conread position: | 1-368 |
| Cow position: | chr17:16856616-16856972 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 1-368 |
| Cow position: | chr17:19267924-19268284 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr17:24029099-24029458 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 4-246 |
| Cow position: | chr17:1787035-1787290 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 4-270 |
| Cow position: | chr17:20403320-20403049 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 4-334 |
| Cow position: | chr17:20086856-20087171 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 4-368 |
| Cow position: | chr17:6069456-6069103 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 265 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 93, 263 |
| Conread position: | 4-368 |
| Cow position: | chr17:11086820-11087176 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 7-363 |
| Cow position: | chr17:34157018-34156669 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 7-364 |
| Cow position: | chr17:14040141-14040483 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 248 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 90, 138 |
| Conread position: | 7-364 |
| Cow position: | chr17:15142458-15142817 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 255 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 7-364 |
| Cow position: | chr17:15156072-15156419 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 92, 37 |
| Conread position: | 7-364 |
| Cow position: | chr17:20099578-20099927 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 201 |
| Conread position: | 7-364 |
| Cow position: | chr17:23323555-23323903 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 247 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 88, 27 |
| Conread position: | 7-364 |
| Cow position: | chr17:24783059-24782710 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 63, 155 |
| Conread position: | 7-364 |
| Cow position: | chr17:31767142-31767491 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr17:2247171-2247523 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 7-368 |
| Cow position: | chr17:2263004-2262650 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr17:3655396-3655748 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 88, 118 |
| Conread position: | 7-368 |
| Cow position: | chr17:8210010-8209654 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 156 |
| Conread position: | 7-368 |
| Cow position: | chr17:15436691-15436338 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr17:20080971-20081317 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 88, 103 |
| Conread position: | 13-252 |
| Cow position: | chr17:4941839-4942086 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 16-333 |
| Cow position: | chr17:11025626-11025937 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 32, 146 |
| Conread position: | 22-368 |
| Cow position: | chr17:15851573-15851238 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 125 |
| Conread position: | 28-368 |
| Cow position: | chr17:4082902-4082588 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 137, 60 |
| Conread position: | 29-270 |
| Cow position: | chr17:20722495-20722244 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 44-364 |
| Cow position: | chr17:18102830-18103137 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 56, 12 |
| Conread position: | 46-368 |
| Cow position: | chr17:14216176-14216487 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 99-356 |
| Cow position: | chr17:6000640-6000885 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 232, 61 |
Show alignments to all cow chromosomes.