Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-242 |
| Cow position: | chr2:5484440-5484683 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 198, 77 |
| Conread position: | 1-254 |
| Cow position: | chr2:11730373-11730137 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 165, 19 |
| Conread position: | 1-254 |
| Cow position: | chr2:81257731-81257469 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 96, 161 |
| Conread position: | 1-270 |
| Cow position: | chr2:41173227-41172947 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 173 |
| Conread position: | 1-278 |
| Cow position: | chr2:55483585-55483858 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 94, 141 |
| Conread position: | 1-334 |
| Cow position: | chr2:29030692-29030372 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 225, 43 |
| Conread position: | 1-343 |
| Cow position: | chr2:282130-282464 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-343 |
| Cow position: | chr2:10185666-10185999 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 109 |
| Conread position: | 1-343 |
| Cow position: | chr2:52063104-52062770 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-345 |
| Cow position: | chr2:20901788-20902126 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 1-346 |
| Cow position: | chr2:42670146-42670483 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 201 |
| Conread position: | 1-346 |
| Cow position: | chr2:53330321-53329980 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 233 |
| Conread position: | 1-351 |
| Cow position: | chr2:62794897-62794566 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 161, 93 |
| Conread position: | 1-363 |
| Cow position: | chr2:51617807-51617460 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 33 |
| Conread position: | 1-364 |
| Cow position: | chr2:8119101-8118746 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr2:1113799-1113444 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 102, 162 |
| Conread position: | 1-368 |
| Cow position: | chr2:1691536-1691174 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 1-368 |
| Cow position: | chr2:10268101-10268458 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 43 |
| Conread position: | 1-368 |
| Cow position: | chr2:13045154-13045503 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 241 |
| Conread position: | 1-368 |
| Cow position: | chr2:16900812-16900453 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr2:19011906-19011547 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 267 |
| Conread position: | 1-368 |
| Cow position: | chr2:28649039-28649397 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr2:28793810-28793451 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 210 |
| Conread position: | 1-368 |
| Cow position: | chr2:36980939-36980582 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 1-368 |
| Cow position: | chr2:39422182-39421823 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 211 |
| Conread position: | 1-368 |
| Cow position: | chr2:50078159-50077801 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 44 |
| Conread position: | 1-368 |
| Cow position: | chr2:80292401-80292751 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 96, 122 |
| Conread position: | 2-249 |
| Cow position: | chr2:49605501-49605242 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 3-255 |
| Cow position: | chr2:5889082-5889344 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 77, 7 |
| Conread position: | 4-346 |
| Cow position: | chr2:12223756-12224089 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 148 |
| Conread position: | 4-367 |
| Cow position: | chr2:15576291-15576637 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 99, 51 |
| Conread position: | 4-368 |
| Cow position: | chr2:11158563-11158918 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 33 |
| Conread position: | 4-368 |
| Cow position: | chr2:14823640-14823303 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 91, 56 |
| Conread position: | 4-368 |
| Cow position: | chr2:16074952-16075314 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 4-368 |
| Cow position: | chr2:24925122-24924763 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 207 |
| Conread position: | 4-368 |
| Cow position: | chr2:32065524-32065880 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 263 |
| Conread position: | 4-368 |
| Cow position: | chr2:47811399-47811046 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 90 |
| Conread position: | 4-368 |
| Cow position: | chr2:65937896-65938249 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 5-254 |
| Cow position: | chr2:36029815-36030070 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 90, 8 |
| Conread position: | 5-368 |
| Cow position: | chr2:36052452-36052807 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 178 |
| Conread position: | 7-254 |
| Cow position: | chr2:53554508-53554260 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 7-268 |
| Cow position: | chr2:780893-781160 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 7-268 |
| Cow position: | chr2:7903588-7903322 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 7-270 |
| Cow position: | chr2:2087620-2087893 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 7-270 |
| Cow position: | chr2:43961247-43960977 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 7-341 |
| Cow position: | chr2:45964563-45964889 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 213 |
| Conread position: | 7-344 |
| Cow position: | chr2:5903765-5904094 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 201 |
| Conread position: | 7-356 |
| Cow position: | chr2:10732219-10732561 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 186 |
| Conread position: | 7-364 |
| Cow position: | chr2:364503-364854 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 28, 155 |
| Conread position: | 7-364 |
| Cow position: | chr2:52617025-52616676 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr2:2355887-2356240 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr2:2412244-2412595 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 7-368 |
| Cow position: | chr2:4402604-4402958 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 205 |
| Conread position: | 7-368 |
| Cow position: | chr2:9958516-9958870 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 67, 207 |
| Conread position: | 7-368 |
| Cow position: | chr2:32656210-32655870 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 90, 113 |
| Conread position: | 7-368 |
| Cow position: | chr2:41657729-41657376 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 205 |
| Conread position: | 7-368 |
| Cow position: | chr2:49472803-49472448 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 7-368 |
| Cow position: | chr2:54738035-54737682 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr2:57335750-57335397 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 212 |
| Conread position: | 7-368 |
| Cow position: | chr2:59413131-59413483 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 88, 259 |
| Conread position: | 7-368 |
| Cow position: | chr2:67420397-67420749 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 88, 53 |
| Conread position: | 10-254 |
| Cow position: | chr2:44934421-44934657 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 155, 84 |
| Conread position: | 10-334 |
| Cow position: | chr2:5869835-5870148 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 233 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 38, 204 |
| Conread position: | 10-367 |
| Cow position: | chr2:44990753-44991090 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 37, 23 |
| Conread position: | 10-368 |
| Cow position: | chr2:34051717-34051368 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 13-364 |
| Cow position: | chr2:78763197-78762858 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 6, 13 |
| Conread position: | 14-364 |
| Cow position: | chr2:41151149-41150823 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 109 |
| Conread position: | 16-368 |
| Cow position: | chr2:9908458-9908114 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 145 |
| Conread position: | 29-368 |
| Cow position: | chr2:3324030-3324359 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 51-344 |
| Cow position: | chr2:25888085-25888367 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 72-368 |
| Cow position: | chr2:5812914-5813192 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 148 |
| Conread position: | 105-324 |
| Cow position: | chr2:53745204-53744994 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 68, 87 |
| Conread position: | 105-362 |
| Cow position: | chr2:50323642-50323397 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 55 |
| Conread position: | 107-270 |
| Cow position: | chr2:42332422-42332587 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 161-368 |
| Cow position: | chr2:80955241-80955438 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
Show alignments to all cow chromosomes.