Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-319 |
| Cow position: | chr20:12437632-12437940 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-332 |
| Cow position: | chr20:19355845-19355494 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 329 |
| Conread position: | 1-364 |
| Cow position: | chr20:23468585-23468940 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-364 |
| Cow position: | chr20:25849744-25850105 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 269 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 1-368 |
| Cow position: | chr20:5536010-5535654 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 1-368 |
| Cow position: | chr20:14869878-14870229 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 165, 65 |
| Conread position: | 1-368 |
| Cow position: | chr20:15096803-15097157 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 260 |
| Conread position: | 1-368 |
| Cow position: | chr20:15293079-15292724 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 268 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 96, 18 |
| Conread position: | 1-368 |
| Cow position: | chr20:23799961-23799602 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 203 |
| Conread position: | 1-369 |
| Cow position: | chr20:17660996-17661358 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-369 |
| Cow position: | chr20:27870281-27869922 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-369 |
| Cow position: | chr20:35125571-35125213 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 96, 118 |
| Conread position: | 4-270 |
| Cow position: | chr20:24615794-24616070 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 4-364 |
| Cow position: | chr20:12569595-12569245 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 198 |
| Conread position: | 4-367 |
| Cow position: | chr20:8216588-8216236 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 191 |
| Conread position: | 4-367 |
| Cow position: | chr20:28564516-28564870 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 4-368 |
| Cow position: | chr20:13763979-13763627 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 157 |
| Conread position: | 4-368 |
| Cow position: | chr20:18314275-18314621 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 110 |
| Conread position: | 7-268 |
| Cow position: | chr20:19438987-19438715 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr20:823830-823478 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 128 |
| Conread position: | 7-368 |
| Cow position: | chr20:10839648-10839993 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 7-368 |
| Cow position: | chr20:28161891-28161538 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 197 |
| Conread position: | 7-368 |
| Cow position: | chr20:38351745-38351392 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 8-334 |
| Cow position: | chr20:22208187-22207873 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 158, 10 |
| Conread position: | 10-364 |
| Cow position: | chr20:15066548-15066207 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 251 |
| Conread position: | 10-368 |
| Cow position: | chr20:29949572-29949222 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 192 |
| Conread position: | 16-360 |
| Cow position: | chr20:8973755-8974092 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 58, 145 |
| Conread position: | 33-364 |
| Cow position: | chr20:21915364-21915042 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 64, 116 |
| Conread position: | 84-368 |
| Cow position: | chr20:7113197-7113469 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 93-368 |
| Cow position: | chr20:37442312-37442586 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 73, 114 |
| Conread position: | 96-368 |
| Cow position: | chr20:30685300-30685040 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 169 |
Show alignments to all cow chromosomes.