Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-251 |
| Cow position: | chr21:5018302-5018046 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-271 |
| Cow position: | chr21:18817360-18817643 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 206 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 1-346 |
| Cow position: | chr21:10567859-10567532 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 1-346 |
| Cow position: | chr21:31515135-31515470 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 208 |
| Conread position: | 1-361 |
| Cow position: | chr21:218234-217894 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 1-364 |
| Cow position: | chr21:30269-29919 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 191 |
| Conread position: | 1-364 |
| Cow position: | chr21:360835-360480 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 266 |
| Conread position: | 1-364 |
| Cow position: | chr21:27069776-27070130 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 177 |
| Conread position: | 1-367 |
| Cow position: | chr21:1192949-1192594 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-368 |
| Cow position: | chr21:2417408-2417048 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 206 |
| Conread position: | 1-368 |
| Cow position: | chr21:2882546-2882905 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-368 |
| Cow position: | chr21:3779959-3779601 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 177 |
| Conread position: | 1-368 |
| Cow position: | chr21:5840072-5840431 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr21:26402296-26402655 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 207 |
| Conread position: | 1-368 |
| Cow position: | chr21:26637007-26637369 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 94, 59 |
| Conread position: | 1-368 |
| Cow position: | chr21:33253372-33253010 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 98, 81 |
| Conread position: | 1-368 |
| Cow position: | chr21:37149227-37148868 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 213 |
| Conread position: | 1-368 |
| Cow position: | chr21:40270483-40270839 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 2-368 |
| Cow position: | chr21:35144949-35144595 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 207 |
| Conread position: | 4-364 |
| Cow position: | chr21:37718830-37719181 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 4-367 |
| Cow position: | chr21:147118-146763 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 4-368 |
| Cow position: | chr21:10851268-10850913 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 153 |
| Conread position: | 4-369 |
| Cow position: | chr21:4185093-4184736 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 203 |
| Conread position: | 7-268 |
| Cow position: | chr21:34001493-34001760 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 51 |
| Conread position: | 7-357 |
| Cow position: | chr21:1287032-1287374 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 90, 219 |
| Conread position: | 7-364 |
| Cow position: | chr21:468050-467715 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 96, 48 |
| Conread position: | 7-366 |
| Cow position: | chr21:46916861-46916510 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 205 |
| Conread position: | 7-368 |
| Cow position: | chr21:11506790-11506430 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 254 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 72, 161 |
| Conread position: | 7-368 |
| Cow position: | chr21:37046806-37046455 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 96 |
| Conread position: | 13-368 |
| Cow position: | chr21:4588816-4589161 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 16-368 |
| Cow position: | chr21:39426236-39425896 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 249 |
| Conread position: | 17-368 |
| Cow position: | chr21:12054832-12055169 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 49 |
| Conread position: | 28-368 |
| Cow position: | chr21:11452491-11452823 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 133 |
| Conread position: | 44-368 |
| Cow position: | chr21:49295756-49295440 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 59, 160 |
| Conread position: | 46-368 |
| Cow position: | chr21:4077980-4077669 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 162 |
| Conread position: | 53-368 |
| Cow position: | chr21:28256573-28256263 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 42, 166 |
| Conread position: | 94-368 |
| Cow position: | chr21:47941956-47941691 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 71, 113 |
| Conread position: | 102-368 |
| Cow position: | chr21:23603632-23603373 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 132 |
| Conread position: | 113-368 |
| Cow position: | chr21:27149990-27149744 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 37, 46 |
Show alignments to all cow chromosomes.