Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-254 |
| Cow position: | chr22:37133671-37133411 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 94, 157 |
| Conread position: | 1-270 |
| Cow position: | chr22:41240393-41240113 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 103, 43 |
| Conread position: | 1-363 |
| Cow position: | chr22:37268180-37267826 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 244 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 70, 86 |
| Conread position: | 1-364 |
| Cow position: | chr22:18815361-18815713 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-364 |
| Cow position: | chr22:27308756-27309111 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 159 |
| Conread position: | 1-364 |
| Cow position: | chr22:44458073-44457720 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 100, 124 |
| Conread position: | 1-364 |
| Cow position: | chr22:44934989-44934649 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-368 |
| Cow position: | chr22:21590357-21589998 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr22:37292646-37293009 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 211 |
| Conread position: | 1-368 |
| Cow position: | chr22:42992195-42991840 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 145 |
| Conread position: | 4-268 |
| Cow position: | chr22:11032763-11032493 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 137 |
| Conread position: | 4-368 |
| Cow position: | chr22:559693-560040 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 255 |
| Conread position: | 4-368 |
| Cow position: | chr22:1520007-1520359 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 157 |
| Conread position: | 4-368 |
| Cow position: | chr22:19142676-19143029 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 4-368 |
| Cow position: | chr22:34169355-34168999 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 4-368 |
| Cow position: | chr22:39468504-39468860 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 5-369 |
| Cow position: | chr22:522379-522734 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 7-254 |
| Cow position: | chr22:37072071-37072329 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 7-276 |
| Cow position: | chr22:36590271-36590558 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 7-344 |
| Cow position: | chr22:17327442-17327770 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 79 |
| Conread position: | 7-364 |
| Cow position: | chr22:538114-537765 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-364 |
| Cow position: | chr22:6021676-6021327 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 248 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 90, 153 |
| Conread position: | 7-364 |
| Cow position: | chr22:31334022-31334370 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 152 |
| Conread position: | 7-365 |
| Cow position: | chr22:10908823-10909173 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-366 |
| Cow position: | chr22:2394985-2395331 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 96, 59 |
| Conread position: | 7-366 |
| Cow position: | chr22:11804041-11804394 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 207 |
| Conread position: | 7-368 |
| Cow position: | chr22:1323220-1322877 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 89, 53 |
| Conread position: | 7-368 |
| Cow position: | chr22:1879807-1879454 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 153 |
| Conread position: | 7-368 |
| Cow position: | chr22:3277346-3277697 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr22:5232278-5232619 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 7-368 |
| Cow position: | chr22:14630432-14630079 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 205 |
| Conread position: | 7-368 |
| Cow position: | chr22:24951114-24950758 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 156 |
| Conread position: | 7-368 |
| Cow position: | chr22:36184772-36184418 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 202 |
| Conread position: | 7-368 |
| Cow position: | chr22:36860522-36860869 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 95 |
| Conread position: | 7-368 |
| Cow position: | chr22:44350649-44351001 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 201 |
| Conread position: | 7-368 |
| Cow position: | chr22:44492046-44491694 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 10-368 |
| Cow position: | chr22:6142377-6142716 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 85, 96 |
| Conread position: | 14-270 |
| Cow position: | chr22:8135114-8135367 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 148, 9 |
| Conread position: | 16-270 |
| Cow position: | chr22:15312947-15313212 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 17-364 |
| Cow position: | chr22:20239838-20240178 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 144 |
| Conread position: | 24-270 |
| Cow position: | chr22:6502149-6502399 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 28-368 |
| Cow position: | chr22:35671362-35671694 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 67, 192 |
| Conread position: | 33-364 |
| Cow position: | chr22:3803175-3802853 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 36-368 |
| Cow position: | chr22:326182-326508 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 174 |
| Conread position: | 46-364 |
| Cow position: | chr22:27285001-27284691 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 114 |
| Conread position: | 66-254 |
| Cow position: | chr22:46580783-46580981 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.