Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-254 |
| Cow position: | chr24:17695877-17696141 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-269 |
| Cow position: | chr24:12143234-12143509 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 65 |
| Conread position: | 1-270 |
| Cow position: | chr24:147506-147784 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 207 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 96, 42 |
| Conread position: | 1-351 |
| Cow position: | chr24:14871210-14871550 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 1-355 |
| Cow position: | chr24:36558667-36559015 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 201 |
| Conread position: | 1-363 |
| Cow position: | chr24:38638644-38638287 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 102, 262 |
| Conread position: | 1-364 |
| Cow position: | chr24:5992122-5992474 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 159 |
| Conread position: | 1-364 |
| Cow position: | chr24:19834500-19834141 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 210 |
| Conread position: | 1-368 |
| Cow position: | chr24:4414427-4414785 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 108 |
| Conread position: | 1-368 |
| Cow position: | chr24:6332589-6332950 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 206 |
| Conread position: | 1-368 |
| Cow position: | chr24:6407135-6406776 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 207 |
| Conread position: | 1-368 |
| Cow position: | chr24:9545167-9544811 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 107 |
| Conread position: | 1-368 |
| Cow position: | chr24:12087309-12086953 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 1-368 |
| Cow position: | chr24:12334653-12335012 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 219 |
| Conread position: | 1-368 |
| Cow position: | chr24:19702588-19702232 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 94, 64 |
| Conread position: | 1-368 |
| Cow position: | chr24:22972196-22971841 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 219 |
| Conread position: | 1-369 |
| Cow position: | chr24:29188396-29188036 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 4-368 |
| Cow position: | chr24:12128966-12129318 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 262 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 93, 52 |
| Conread position: | 5-270 |
| Cow position: | chr24:29183252-29182976 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 7-252 |
| Cow position: | chr24:14389441-14389698 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 7-254 |
| Cow position: | chr24:12109606-12109866 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 7-277 |
| Cow position: | chr24:12163010-12162731 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 93, 270 |
| Conread position: | 7-333 |
| Cow position: | chr24:6327932-6328251 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-364 |
| Cow position: | chr24:6085160-6084819 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 135, 96 |
| Conread position: | 7-364 |
| Cow position: | chr24:6435580-6435229 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 7-368 |
| Cow position: | chr24:6024008-6024357 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 253 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 7-368 |
| Cow position: | chr24:9187633-9187987 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 154 |
| Conread position: | 7-368 |
| Cow position: | chr24:12699708-12700070 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 67, 162 |
| Conread position: | 7-368 |
| Cow position: | chr24:23504765-23505118 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 153 |
| Conread position: | 7-368 |
| Cow position: | chr24:29305217-29305574 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 7-368 |
| Cow position: | chr24:33934472-33934121 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 201 |
| Conread position: | 7-368 |
| Cow position: | chr24:43814863-43814511 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 16-368 |
| Cow position: | chr24:44018608-44018280 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 134, 70 |
| Conread position: | 26-351 |
| Cow position: | chr24:40193592-40193279 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 28-368 |
| Cow position: | chr24:12484238-12484570 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 133 |
| Conread position: | 55-334 |
| Cow position: | chr24:14383543-14383812 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 42, 25 |
| Conread position: | 60-363 |
| Cow position: | chr24:7089922-7090218 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 142 |
| Conread position: | 76-368 |
| Cow position: | chr24:8031321-8031037 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 144 |
| Conread position: | 95-275 |
| Cow position: | chr24:40656061-40655872 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 182 |
Show alignments to all cow chromosomes.