Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-252 |
| Cow position: | chr28:29760863-29761124 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 1-280 |
| Cow position: | chr28:10581024-10581310 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 97, 146 |
| Conread position: | 1-343 |
| Cow position: | chr28:26425189-26425522 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-346 |
| Cow position: | chr28:8380128-8379786 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 187 |
| Conread position: | 1-364 |
| Cow position: | chr28:3191189-3191539 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 207 |
| Conread position: | 1-364 |
| Cow position: | chr28:18519383-18519733 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 96, 200 |
| Conread position: | 1-368 |
| Cow position: | chr28:1166812-1167169 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 98 |
| Conread position: | 1-368 |
| Cow position: | chr28:1813797-1814156 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 199 |
| Conread position: | 1-368 |
| Cow position: | chr28:5113230-5113588 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 265 |
| Conread position: | 1-368 |
| Cow position: | chr28:5567221-5566862 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 266 |
| Conread position: | 1-368 |
| Cow position: | chr28:5750641-5750990 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-368 |
| Cow position: | chr28:6779272-6779631 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 159 |
| Conread position: | 1-368 |
| Cow position: | chr28:7003062-7002704 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 207 |
| Conread position: | 1-368 |
| Cow position: | chr28:12409168-12409518 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 98, 75 |
| Conread position: | 1-368 |
| Cow position: | chr28:13461040-13460681 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr28:17666240-17666594 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 260 |
| Conread position: | 1-368 |
| Cow position: | chr28:21360551-21360188 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 240 |
| Conread position: | 1-368 |
| Cow position: | chr28:22260085-22260444 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 207 |
| Conread position: | 1-368 |
| Cow position: | chr28:29821062-29820713 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 96, 223 |
| Conread position: | 1-368 |
| Cow position: | chr28:32791311-32791667 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 2-368 |
| Cow position: | chr28:33253377-33253011 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 51, 273 |
| Conread position: | 4-368 |
| Cow position: | chr28:5938548-5938192 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 204 |
| Conread position: | 7-254 |
| Cow position: | chr28:22232360-22232619 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 7-268 |
| Cow position: | chr28:5765812-5765532 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 7-268 |
| Cow position: | chr28:5814434-5814177 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 88, 30 |
| Conread position: | 7-271 |
| Cow position: | chr28:1505927-1505655 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 90, 158 |
| Conread position: | 7-323 |
| Cow position: | chr28:24883915-24884226 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 88, 155 |
| Conread position: | 7-368 |
| Cow position: | chr28:1386338-1386693 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 92, 154 |
| Conread position: | 7-368 |
| Cow position: | chr28:2723864-2724216 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 152 |
| Conread position: | 7-368 |
| Cow position: | chr28:6538204-6538556 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 112 |
| Conread position: | 7-368 |
| Cow position: | chr28:12151365-12151013 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 200 |
| Conread position: | 7-368 |
| Cow position: | chr28:14751604-14751249 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr28:24589914-24589560 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 155 |
| Conread position: | 7-368 |
| Cow position: | chr28:24668672-24668328 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 116 |
| Conread position: | 10-363 |
| Cow position: | chr28:783727-783389 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 248 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 89, 26 |
| Conread position: | 10-364 |
| Cow position: | chr28:8719889-8720239 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 198 |
| Conread position: | 13-368 |
| Cow position: | chr28:10072329-10071983 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 207 |
| Conread position: | 27-368 |
| Cow position: | chr28:3019677-3020010 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 70, 237 |
| Conread position: | 46-364 |
| Cow position: | chr28:7823562-7823253 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 49, 173 |
| Conread position: | 94-367 |
| Cow position: | chr28:7788978-7789238 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 71, 168 |
| Conread position: | 96-357 |
| Cow position: | chr28:17389452-17389201 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 66, 111 |
Show alignments to all cow chromosomes.