Cow genome map


           Conread name:
           unkn-IIU602653792.R1
        

               Conread position:
               1-254
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               94, 184
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               1-268
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 75
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-270
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               96, 146
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 59
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               103, 165
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               1-343
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 93
               

               Conread position:
               1-346
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 158
               

               Conread position:
               1-357
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               91, 37
               

               Conread position:
               1-363
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 207
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 43
               

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 242
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 207
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 207
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 207
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               96, 65
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 207
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               161, 93
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 162
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 152
               

               Conread position:
               1-368
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 208
               

               Conread position:
               1-369
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 206
               

               Conread position:
               2-270
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               93, 158
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               248
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               101, 231
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               93, 157
               

               Conread position:
               2-364
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 158
               

               Conread position:
               2-368
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 206
               

               Conread position:
               2-368
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               3-270
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               4-252
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               4-254
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               5-368
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 157
               

               Conread position:
               7-270
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               81, 109
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               7-276
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               75, 69
               

               Conread position:
               7-312
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               88, 271
               

               Conread position:
               7-334
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-346
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 79
               

               Conread position:
               7-363
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 59
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 154
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-367
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               7-367
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 20
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 201
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 212
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 153
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               143, 122
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 205
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               88, 37
               

               Conread position:
               7-368
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               84, 111
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 152
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 52
               

               Conread position:
               8-368
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 200
               

               Conread position:
               10-368
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 198
               

               Conread position:
               14-270
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               15-368
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               147, 75
               

               Conread position:
               16-254
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               16-333
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 144
               

               Conread position:
               16-364
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               16-368
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 144
               

               Conread position:
               17-254
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               23-346
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               74, 185
               

               Conread position:
               28-368
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               240
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               45, 185
               

               Conread position:
               29-368
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               29-368
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               31-346
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               7, 207
               

               Conread position:
               66-357
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               29, 196
               

               Conread position:
               131-368
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               31, 75
               

               Conread position:
               168-363
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 95
               
Show alignments to all cow chromosomes.