Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-253 |
| Cow position: | chr7:67495190-67494927 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 45, 205 |
| Conread position: | 1-272 |
| Cow position: | chr7:54670992-54671283 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 45, 123 |
| Conread position: | 1-343 |
| Cow position: | chr7:51015345-51015011 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 227 |
| Conread position: | 1-344 |
| Cow position: | chr7:19269352-19269683 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 95, 210 |
| Conread position: | 1-344 |
| Cow position: | chr7:21986506-21986172 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-346 |
| Cow position: | chr7:445269-445597 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 1-367 |
| Cow position: | chr7:5309033-5309385 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 261 |
| Conread position: | 1-367 |
| Cow position: | chr7:13532823-13533188 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-368 |
| Cow position: | chr7:1371566-1371924 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 265 |
| Conread position: | 1-368 |
| Cow position: | chr7:10430343-10430697 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr7:14138516-14138873 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 266 |
| Conread position: | 1-368 |
| Cow position: | chr7:21126582-21126941 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 201 |
| Conread position: | 1-368 |
| Cow position: | chr7:25440583-25440231 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 96, 159 |
| Conread position: | 1-368 |
| Cow position: | chr7:33405163-33405519 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-368 |
| Cow position: | chr7:34486996-34486636 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 207 |
| Conread position: | 1-368 |
| Cow position: | chr7:45948064-45948428 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 160 |
| Conread position: | 1-368 |
| Cow position: | chr7:46901000-46901351 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 96, 110 |
| Conread position: | 1-368 |
| Cow position: | chr7:48635505-48635159 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 160 |
| Conread position: | 1-368 |
| Cow position: | chr7:55536848-55537198 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 260 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 96, 27 |
| Conread position: | 1-368 |
| Cow position: | chr7:59679927-59679573 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 94, 148 |
| Conread position: | 1-368 |
| Cow position: | chr7:61578535-61578176 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr7:64239923-64240288 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 242 |
| Conread position: | 1-368 |
| Cow position: | chr7:67799903-67799556 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 29 |
| Conread position: | 1-369 |
| Cow position: | chr7:24807377-24807735 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 164 |
| Conread position: | 1-369 |
| Cow position: | chr7:27787711-27787355 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 96, 148 |
| Conread position: | 1-369 |
| Cow position: | chr7:38397895-38397535 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 2-218 |
| Cow position: | chr7:68334023-68333808 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 101, 145 |
| Conread position: | 4-247 |
| Cow position: | chr7:58994669-58994417 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 4-254 |
| Cow position: | chr7:42871218-42870959 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 4-268 |
| Cow position: | chr7:15810384-15810656 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 55 |
| Conread position: | 4-368 |
| Cow position: | chr7:995591-995237 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 4-368 |
| Cow position: | chr7:54643411-54643768 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 42, 206 |
| Conread position: | 7-252 |
| Cow position: | chr7:63386802-63386545 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 7-270 |
| Cow position: | chr7:7210923-7211196 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 7-270 |
| Cow position: | chr7:65811907-65811632 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 7-344 |
| Cow position: | chr7:1452720-1452388 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 67, 142 |
| Conread position: | 7-355 |
| Cow position: | chr7:11462971-11463312 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 7-363 |
| Cow position: | chr7:5663628-5663292 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 90, 170 |
| Conread position: | 7-364 |
| Cow position: | chr7:526049-525701 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 11 |
| Conread position: | 7-364 |
| Cow position: | chr7:545918-545568 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 71, 214 |
| Conread position: | 7-364 |
| Cow position: | chr7:3300082-3300431 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-364 |
| Cow position: | chr7:20514702-20515051 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 7-364 |
| Cow position: | chr7:29471533-29471184 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 73 |
| Conread position: | 7-367 |
| Cow position: | chr7:20798368-20798721 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 152 |
| Conread position: | 7-368 |
| Cow position: | chr7:15799-16152 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 250 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 40, 206 |
| Conread position: | 7-368 |
| Cow position: | chr7:6580262-6579909 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 151 |
| Conread position: | 7-368 |
| Cow position: | chr7:21233938-21234292 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 90, 36 |
| Conread position: | 7-368 |
| Cow position: | chr7:27101221-27101573 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 7-368 |
| Cow position: | chr7:39792844-39792494 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 90, 259 |
| Conread position: | 7-368 |
| Cow position: | chr7:68481619-68481274 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 256 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 90, 112 |
| Conread position: | 16-368 |
| Cow position: | chr7:49604818-49604472 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 146 |
| Conread position: | 16-368 |
| Cow position: | chr7:60794234-60794580 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 198 |
| Conread position: | 25-368 |
| Cow position: | chr7:21930195-21929871 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 137, 77 |
| Conread position: | 29-368 |
| Cow position: | chr7:6647605-6647936 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 131 |
| Conread position: | 55-363 |
| Cow position: | chr7:59138683-59138385 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 45, 134 |
| Conread position: | 66-254 |
| Cow position: | chr7:21852820-21853015 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 72-368 |
| Cow position: | chr7:59684190-59683907 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 105-270 |
| Cow position: | chr7:40269019-40269188 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.