Cow genome map
| Conread name: | unkn-IIU602653792.R1 |
| Conread position: | 1-253 |
| Cow position: | chr8:45691753-45692021 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1-254 |
| Cow position: | chr8:3785904-3785640 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 1-254 |
| Cow position: | chr8:36635236-36635495 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 147 |
| Conread position: | 1-254 |
| Cow position: | chr8:41644406-41644667 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 95, 18 |
| Conread position: | 1-254 |
| Cow position: | chr8:42468930-42468667 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 102, 178 |
| Conread position: | 1-270 |
| Cow position: | chr8:12801395-12801117 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 102, 42 |
| Conread position: | 1-341 |
| Cow position: | chr8:42485184-42484852 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-346 |
| Cow position: | chr8:29007907-29007577 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-364 |
| Cow position: | chr8:38391908-38391570 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 161, 93 |
| Conread position: | 1-367 |
| Cow position: | chr8:14927613-14927969 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 1-368 |
| Cow position: | chr8:3855757-3856106 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 142 |
| Conread position: | 1-368 |
| Cow position: | chr8:4687670-4687311 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr8:5017447-5017088 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 207 |
| Conread position: | 1-368 |
| Cow position: | chr8:8400848-8401206 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 250 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 161, 202 |
| Conread position: | 1-368 |
| Cow position: | chr8:8911769-8911417 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 96, 124 |
| Conread position: | 1-368 |
| Cow position: | chr8:17312291-17311932 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-368 |
| Cow position: | chr8:24915068-24915427 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-368 |
| Cow position: | chr8:25408995-25408639 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 146 |
| Conread position: | 1-368 |
| Cow position: | chr8:32318284-32318642 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 203 |
| Conread position: | 1-368 |
| Cow position: | chr8:39194947-39195299 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 248 |
| Conread position: | 1-368 |
| Cow position: | chr8:46051452-46051096 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 57 |
| Conread position: | 1-368 |
| Cow position: | chr8:47661052-47661411 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 219 |
| Conread position: | 1-368 |
| Cow position: | chr8:49859500-49859853 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 13, 63 |
| Conread position: | 1-368 |
| Cow position: | chr8:50995036-50994684 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 37 |
| Conread position: | 1-368 |
| Cow position: | chr8:59261651-59262009 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 219 |
| Conread position: | 1-368 |
| Cow position: | chr8:60061651-60061291 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 1-369 |
| Cow position: | chr8:11832977-11832617 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 257 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 98, 207 |
| Conread position: | 1-369 |
| Cow position: | chr8:14590634-14590994 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 207 |
| Conread position: | 2-352 |
| Cow position: | chr8:35213148-35212808 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 225 |
| Conread position: | 3-368 |
| Cow position: | chr8:8308857-8308505 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 96, 40 |
| Conread position: | 4-270 |
| Cow position: | chr8:42158722-42158995 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 91, 242 |
| Conread position: | 4-270 |
| Cow position: | chr8:44243319-44243593 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 93, 40 |
| Conread position: | 4-333 |
| Cow position: | chr8:42579315-42579642 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 99, 40 |
| Conread position: | 4-364 |
| Cow position: | chr8:7162162-7161810 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 263 |
| Conread position: | 4-368 |
| Cow position: | chr8:33589640-33589284 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 204 |
| Conread position: | 4-368 |
| Cow position: | chr8:50929865-50930221 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 216 |
| Conread position: | 5-368 |
| Cow position: | chr8:1320304-1319950 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 90, 71 |
| Conread position: | 7-270 |
| Cow position: | chr8:27579656-27579384 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-324 |
| Cow position: | chr8:37654601-37654916 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 210 |
| Conread position: | 7-363 |
| Cow position: | chr8:25417595-25417939 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 89, 136 |
| Conread position: | 7-365 |
| Cow position: | chr8:61906422-61906071 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 154 |
| Conread position: | 7-366 |
| Cow position: | chr8:11763203-11762850 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 258 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 42, 262 |
| Conread position: | 7-366 |
| Cow position: | chr8:32630766-32631117 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-367 |
| Cow position: | chr8:8315199-8315555 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 211 |
| Conread position: | 7-368 |
| Cow position: | chr8:2170112-2170464 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 142 |
| Conread position: | 7-368 |
| Cow position: | chr8:9736502-9736149 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 252 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 67, 155 |
| Conread position: | 7-368 |
| Cow position: | chr8:10749625-10749273 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 96, 120 |
| Conread position: | 7-368 |
| Cow position: | chr8:20136349-20136701 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 89, 134 |
| Conread position: | 7-368 |
| Cow position: | chr8:30891054-30891407 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr8:32041486-32041839 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 88, 59 |
| Conread position: | 7-368 |
| Cow position: | chr8:32436821-32437176 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr8:34348935-34348582 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-368 |
| Cow position: | chr8:42419173-42419528 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 261 |
| Conread position: | 7-368 |
| Cow position: | chr8:56883766-56883410 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 205 |
| Conread position: | 7-369 |
| Cow position: | chr8:8517320-8517679 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 67, 37 |
| Conread position: | 8-254 |
| Cow position: | chr8:11822544-11822292 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 71, 155 |
| Conread position: | 11-346 |
| Cow position: | chr8:11803082-11802752 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 197 |
| Conread position: | 13-270 |
| Cow position: | chr8:46147085-46147351 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 13-368 |
| Cow position: | chr8:23771887-23771546 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 15-363 |
| Cow position: | chr8:42656717-42657053 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 16-364 |
| Cow position: | chr8:8555896-8556235 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 245 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 79, 144 |
| Conread position: | 16-368 |
| Cow position: | chr8:22571057-22571401 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 256 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 87, 250 |
| Conread position: | 16-368 |
| Cow position: | chr8:37932343-37931999 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 144 |
| Conread position: | 23-368 |
| Cow position: | chr8:49215687-49215350 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 76, 185 |
| Conread position: | 28-368 |
| Cow position: | chr8:2886988-2886657 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 131 |
| Conread position: | 36-368 |
| Cow position: | chr8:11969050-11969374 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 172 |
| Conread position: | 184-368 |
| Cow position: | chr8:45449577-45449393 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 87 |
Show alignments to all cow chromosomes.