Cow genome map
Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
Conread position: | 2-281 |
Cow position: | chr10:41638390-41638112 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 205 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 22, 43 |
Conread position: | 5-197 |
Cow position: | chr10:62629923-62629731 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 149 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 105, 60 |
Conread position: | 6-416 |
Cow position: | chr10:12199608-12199192 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 26 |
Conread position: | 12-411 |
Cow position: | chr10:37428094-37428496 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 77 |
Conread position: | 24-208 |
Cow position: | chr10:25008631-25008811 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 137 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 87, 149 |
Conread position: | 24-413 |
Cow position: | chr10:2711162-2711567 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 286 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 89, 152 |
Conread position: | 24-428 |
Cow position: | chr10:47489573-47489971 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 276 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 21, 153 |
Conread position: | 26-444 |
Cow position: | chr10:3318454-3318033 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 150 |
Conread position: | 35-278 |
Cow position: | chr10:52132128-52131891 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 190 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 78, 38 |
Conread position: | 35-344 |
Cow position: | chr10:19128228-19128553 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 243 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 73, 149 |
Conread position: | 35-346 |
Cow position: | chr10:17745670-17745368 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 229 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 78, 39 |
Conread position: | 39-204 |
Cow position: | chr10:55437467-55437629 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 75, 36 |
Conread position: | 39-218 |
Cow position: | chr10:30320971-30320800 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 141 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 74, 114 |
Conread position: | 39-228 |
Cow position: | chr10:25536595-25536403 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 149 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 72, 137 |
Conread position: | 39-241 |
Cow position: | chr10:48208098-48208289 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 155 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 74, 137 |
Conread position: | 39-243 |
Cow position: | chr10:4013841-4013646 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 71, 42 |
Conread position: | 39-254 |
Cow position: | chr10:55874302-55874088 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 156 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 74, 91 |
Conread position: | 39-277 |
Cow position: | chr10:5421817-5422055 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 137 |
Conread position: | 39-279 |
Cow position: | chr10:37665027-37665264 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 190 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 71, 22 |
Conread position: | 39-281 |
Cow position: | chr10:21477537-21477297 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 177 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 74, 18 |
Conread position: | 39-369 |
Cow position: | chr10:3855285-3854967 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 240 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 73, 85 |
Conread position: | 39-413 |
Cow position: | chr10:767231-767596 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 115 |
Conread position: | 39-413 |
Cow position: | chr10:22455746-22455377 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 283 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 202, 54 |
Conread position: | 39-417 |
Cow position: | chr10:28508674-28509057 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 209 |
Conread position: | 39-418 |
Cow position: | chr10:68203530-68203912 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 35 |
Conread position: | 39-422 |
Cow position: | chr10:18863430-18863047 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 96 |
Conread position: | 39-422 |
Cow position: | chr10:50140959-50141340 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 288 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 25, 69 |
Conread position: | 39-453 |
Cow position: | chr10:11276226-11275814 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 23 |
Conread position: | 40-281 |
Cow position: | chr10:21563560-21563308 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 184 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 40-281 |
Cow position: | chr10:63621313-63621549 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 176 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 67, 123 |
Conread position: | 40-283 |
Cow position: | chr10:24609346-24609103 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 138 |
Conread position: | 40-418 |
Cow position: | chr10:23879599-23879977 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 135 |
Conread position: | 40-437 |
Cow position: | chr10:53374746-53375115 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 279 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 223, 67 |
Conread position: | 40-452 |
Cow position: | chr10:16668783-16669212 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 136 |
Conread position: | 40-453 |
Cow position: | chr10:43060536-43060955 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 72 |
Conread position: | 41-329 |
Cow position: | chr10:35182248-35181956 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 135 |
Conread position: | 46-330 |
Cow position: | chr10:15617894-15618173 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 66, 58 |
Conread position: | 47-430 |
Cow position: | chr10:47584240-47583869 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 265 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 67, 124 |
Conread position: | 48-264 |
Cow position: | chr10:60244167-60243958 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 170 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 63, 127 |
Conread position: | 51-283 |
Cow position: | chr10:67051439-67051212 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 172 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 57, 124 |
Conread position: | 57-270 |
Cow position: | chr10:31220706-31220496 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 162 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 54, 120 |
Conread position: | 66-181 |
Cow position: | chr10:1352397-1352281 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 94 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 64, 108 |
Conread position: | 68-274 |
Cow position: | chr10:54342770-54342974 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 168 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 45, 107 |
Conread position: | 72-390 |
Cow position: | chr10:15824002-15824320 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 244 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 42, 6 |
Conread position: | 97-452 |
Cow position: | chr10:48193198-48193531 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 259 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 266, 7 |
Conread position: | 111-417 |
Cow position: | chr10:17415407-17415702 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 223 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 130, 35 |
Conread position: | 122-283 |
Cow position: | chr10:37092611-37092766 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 132 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 38, 51 |
Conread position: | 122-412 |
Cow position: | chr10:68980000-68979729 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 222 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 179, 50 |
Conread position: | 134-430 |
Cow position: | chr10:60687881-60688176 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 218 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 36, 110 |
Conread position: | 149-418 |
Cow position: | chr10:27223220-27222954 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 219 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 94, 28 |
Conread position: | 182-452 |
Cow position: | chr10:38472631-38472359 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 201 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 6, 127 |
Conread position: | 187-422 |
Cow position: | chr10:28527007-28527237 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 160 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 54, 87 |
Conread position: | 190-410 |
Cow position: | chr10:17923434-17923209 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 52, 6 |
Conread position: | 193-350 |
Cow position: | chr10:7614783-7614621 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 48, 58 |
Conread position: | 193-418 |
Cow position: | chr10:5070675-5070442 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 171 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 49, 29 |
Conread position: | 196-428 |
Cow position: | chr10:27132593-27132835 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 176 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 47, 73 |
Conread position: | 196-428 |
Cow position: | chr10:50964147-50963914 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 165 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 64, 159 |
Conread position: | 196-435 |
Cow position: | chr10:29822482-29822254 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 84 |
Conread position: | 197-453 |
Cow position: | chr10:36303404-36303674 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 200 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 45, 160 |
Conread position: | 221-404 |
Cow position: | chr10:55437897-55438082 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 144 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 58, 18 |
Conread position: | 244-453 |
Cow position: | chr10:22859792-22859999 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 26, 81 |
Conread position: | 253-417 |
Cow position: | chr10:1352289-1352121 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 43, 0 |
Show alignments to all cow chromosomes.