Cow genome map

Conread name: unkn-MI-P-A1-acn-a-04-1-UM.s1

Conread position: 2-281
Cow position: chr10:41638390-41638112 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 22, 43

Conread position: 5-197
Cow position: chr10:62629923-62629731 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 60

Conread position: 6-416
Cow position: chr10:12199608-12199192 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 26

Conread position: 12-411
Cow position: chr10:37428094-37428496 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 77

Conread position: 24-208
Cow position: chr10:25008631-25008811 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 149

Conread position: 24-413
Cow position: chr10:2711162-2711567 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 286
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 89, 152

Conread position: 24-428
Cow position: chr10:47489573-47489971 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 276
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 153

Conread position: 26-444
Cow position: chr10:3318454-3318033 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 150

Conread position: 35-278
Cow position: chr10:52132128-52131891 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 38

Conread position: 35-344
Cow position: chr10:19128228-19128553 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 73, 149

Conread position: 35-346
Cow position: chr10:17745670-17745368 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 78, 39

Conread position: 39-204
Cow position: chr10:55437467-55437629 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 75, 36

Conread position: 39-218
Cow position: chr10:30320971-30320800 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 74, 114

Conread position: 39-228
Cow position: chr10:25536595-25536403 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 137

Conread position: 39-241
Cow position: chr10:48208098-48208289 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 137

Conread position: 39-243
Cow position: chr10:4013841-4013646 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 42

Conread position: 39-254
Cow position: chr10:55874302-55874088 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 74, 91

Conread position: 39-277
Cow position: chr10:5421817-5422055 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 137

Conread position: 39-279
Cow position: chr10:37665027-37665264 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 71, 22

Conread position: 39-281
Cow position: chr10:21477537-21477297 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 18

Conread position: 39-369
Cow position: chr10:3855285-3854967 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 85

Conread position: 39-413
Cow position: chr10:767231-767596 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 115

Conread position: 39-413
Cow position: chr10:22455746-22455377 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 54

Conread position: 39-417
Cow position: chr10:28508674-28509057 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 209

Conread position: 39-418
Cow position: chr10:68203530-68203912 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 35

Conread position: 39-422
Cow position: chr10:18863430-18863047 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 96

Conread position: 39-422
Cow position: chr10:50140959-50141340 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 288
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 25, 69

Conread position: 39-453
Cow position: chr10:11276226-11275814 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 23

Conread position: 40-281
Cow position: chr10:21563560-21563308 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 73, 0

Conread position: 40-281
Cow position: chr10:63621313-63621549 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 123

Conread position: 40-283
Cow position: chr10:24609346-24609103 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 138

Conread position: 40-418
Cow position: chr10:23879599-23879977 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 135

Conread position: 40-437
Cow position: chr10:53374746-53375115 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 279
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 223, 67

Conread position: 40-452
Cow position: chr10:16668783-16669212 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 136

Conread position: 40-453
Cow position: chr10:43060536-43060955 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 72

Conread position: 41-329
Cow position: chr10:35182248-35181956 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 135

Conread position: 46-330
Cow position: chr10:15617894-15618173 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 66, 58

Conread position: 47-430
Cow position: chr10:47584240-47583869 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 124

Conread position: 48-264
Cow position: chr10:60244167-60243958 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 63, 127

Conread position: 51-283
Cow position: chr10:67051439-67051212 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 57, 124

Conread position: 57-270
Cow position: chr10:31220706-31220496 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 54, 120

Conread position: 66-181
Cow position: chr10:1352397-1352281 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 108

Conread position: 68-274
Cow position: chr10:54342770-54342974 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 107

Conread position: 72-390
Cow position: chr10:15824002-15824320 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 244
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 6

Conread position: 97-452
Cow position: chr10:48193198-48193531 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 259
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 266, 7

Conread position: 111-417
Cow position: chr10:17415407-17415702 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 130, 35

Conread position: 122-283
Cow position: chr10:37092611-37092766 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 51

Conread position: 122-412
Cow position: chr10:68980000-68979729 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 179, 50

Conread position: 134-430
Cow position: chr10:60687881-60688176 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 36, 110

Conread position: 149-418
Cow position: chr10:27223220-27222954 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 219
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 94, 28

Conread position: 182-452
Cow position: chr10:38472631-38472359 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 201
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 6, 127

Conread position: 187-422
Cow position: chr10:28527007-28527237 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 87

Conread position: 190-410
Cow position: chr10:17923434-17923209 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 6

Conread position: 193-350
Cow position: chr10:7614783-7614621 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 58

Conread position: 193-418
Cow position: chr10:5070675-5070442 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 29

Conread position: 196-428
Cow position: chr10:27132593-27132835 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 47, 73

Conread position: 196-428
Cow position: chr10:50964147-50963914 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 159

Conread position: 196-435
Cow position: chr10:29822482-29822254 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 84

Conread position: 197-453
Cow position: chr10:36303404-36303674 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 160

Conread position: 221-404
Cow position: chr10:55437897-55438082 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 58, 18

Conread position: 244-453
Cow position: chr10:22859792-22859999 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 81

Conread position: 253-417
Cow position: chr10:1352289-1352121 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.