Cow genome map
| Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
| Conread position: | 1-234 |
| Cow position: | chr17:4625421-4625196 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 71, 34 |
| Conread position: | 1-323 |
| Cow position: | chr17:13703958-13703631 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 36, 176 |
| Conread position: | 2-265 |
| Cow position: | chr17:404524-404257 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 91, 43 |
| Conread position: | 9-264 |
| Cow position: | chr17:10850704-10850948 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 230, 26 |
| Conread position: | 10-171 |
| Cow position: | chr17:14780197-14780031 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 10-452 |
| Cow position: | chr17:28846994-28847437 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 23-207 |
| Cow position: | chr17:19447149-19447332 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 23-398 |
| Cow position: | chr17:7211253-7210888 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 149 |
| Conread position: | 32-274 |
| Cow position: | chr17:15451122-15450889 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 35-325 |
| Cow position: | chr17:3223976-3223696 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 78, 29 |
| Conread position: | 35-422 |
| Cow position: | chr17:43143162-43143563 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 36-324 |
| Cow position: | chr17:34319506-34319813 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 39-194 |
| Cow position: | chr17:13236136-13235979 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 137 |
| Conread position: | 39-241 |
| Cow position: | chr17:10261734-10261539 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 39-306 |
| Cow position: | chr17:33271156-33271423 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 39-334 |
| Cow position: | chr17:11225807-11225507 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 39-413 |
| Cow position: | chr17:26481446-26481096 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 39-418 |
| Cow position: | chr17:32451030-32451420 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 139 |
| Conread position: | 39-426 |
| Cow position: | chr17:18417611-18418005 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 143 |
| Conread position: | 39-429 |
| Cow position: | chr17:27622290-27622676 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 286 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 40-265 |
| Cow position: | chr17:3096348-3096124 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 130, 8 |
| Conread position: | 40-452 |
| Cow position: | chr17:2736338-2735930 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 64 |
| Conread position: | 41-428 |
| Cow position: | chr17:12842887-12842489 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 80 |
| Conread position: | 67-355 |
| Cow position: | chr17:701993-701697 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 44, 111 |
| Conread position: | 68-369 |
| Cow position: | chr17:3849317-3849016 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 174, 18 |
| Conread position: | 70-231 |
| Cow position: | chr17:37166393-37166541 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 61 |
| Conread position: | 74-418 |
| Cow position: | chr17:6980147-6980505 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 246 |
| Conread position: | 79-345 |
| Cow position: | chr17:30330899-30330647 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 221, 25 |
| Conread position: | 126-347 |
| Cow position: | chr17:1309726-1309949 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 115, 48 |
| Conread position: | 161-413 |
| Cow position: | chr17:25117472-25117218 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 187-403 |
| Cow position: | chr17:10831015-10831234 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 54, 168 |
| Conread position: | 197-351 |
| Cow position: | chr17:26631293-26631452 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 201-451 |
| Cow position: | chr17:20208344-20208600 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 293-452 |
| Cow position: | chr17:24609194-24609044 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
Show alignments to all cow chromosomes.