Cow genome map

Conread name: unkn-MI-P-A1-acn-a-04-1-UM.s1

Conread position: 1-413
Cow position: chr19:3082712-3082278 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 129

Conread position: 2-337
Cow position: chr19:30880428-30880086 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 33

Conread position: 9-409
Cow position: chr19:28560204-28560618 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 43

Conread position: 10-213
Cow position: chr19:12477944-12478148 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 103, 25

Conread position: 10-308
Cow position: chr19:47772624-47772320 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 230
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 151

Conread position: 14-329
Cow position: chr19:4548053-4548377 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 54, 164

Conread position: 24-218
Cow position: chr19:39299308-39299502 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 48

Conread position: 24-254
Cow position: chr19:33590311-33590081 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 182
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 84, 147

Conread position: 24-326
Cow position: chr19:36388351-36388643 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 89, 151

Conread position: 24-344
Cow position: chr19:19242649-19242336 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 217, 68

Conread position: 35-274
Cow position: chr19:41504547-41504310 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 141

Conread position: 39-164
Cow position: chr19:33955335-33955205 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 72, 0

Conread position: 39-214
Cow position: chr19:35826976-35826801 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 37, 138

Conread position: 39-230
Cow position: chr19:14533904-14534093 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 137

Conread position: 39-253
Cow position: chr19:30385344-30385131 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 74, 46

Conread position: 39-329
Cow position: chr19:28605778-28606078 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 52

Conread position: 39-343
Cow position: chr19:55898610-55898309 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 72, 135

Conread position: 39-353
Cow position: chr19:25846880-25846568 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 238
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 74, 11

Conread position: 39-356
Cow position: chr19:6362860-6362536 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 39-414
Cow position: chr19:30349661-30350027 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 43

Conread position: 39-418
Cow position: chr19:17439538-17439890 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 273
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 202, 63

Conread position: 39-422
Cow position: chr19:30051436-30051805 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 134

Conread position: 39-429
Cow position: chr19:4601078-4600693 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 18

Conread position: 40-200
Cow position: chr19:41554829-41554670 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 73, 107

Conread position: 40-442
Cow position: chr19:425733-426104 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 274
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 194, 84

Conread position: 41-241
Cow position: chr19:17282392-17282595 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 159

Conread position: 41-274
Cow position: chr19:6478241-6478476 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 72, 135

Conread position: 41-418
Cow position: chr19:30746993-30746608 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 137

Conread position: 54-278
Cow position: chr19:13448724-13448500 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 128

Conread position: 60-283
Cow position: chr19:35026617-35026837 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 31, 73

Conread position: 68-418
Cow position: chr19:30188236-30188592 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 110

Conread position: 89-278
Cow position: chr19:50843784-50843611 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 153, 15

Conread position: 89-353
Cow position: chr19:22670335-22670608 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 22, 86

Conread position: 122-418
Cow position: chr19:49484241-49483947 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 129, 52

Conread position: 134-418
Cow position: chr19:51070406-51070684 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 173-327
Cow position: chr19:33955136-33954974 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 29

Conread position: 180-425
Cow position: chr19:27033286-27033523 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 78, 58

Conread position: 187-422
Cow position: chr19:41830028-41830267 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 179

Conread position: 188-426
Cow position: chr19:5551772-5552011 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 56, 161

Conread position: 196-417
Cow position: chr19:22422882-22423112 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 47, 162

Conread position: 271-418
Cow position: chr19:30452195-30452334 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 277-453
Cow position: chr19:35873629-35873803 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 127

Conread position: 293-450
Cow position: chr19:33284981-33285125 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.