Cow genome map
| Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
| Conread position: | 1-362 |
| Cow position: | chr20:21847255-21847601 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 21 |
| Conread position: | 5-329 |
| Cow position: | chr20:20350131-20350454 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 106, 30 |
| Conread position: | 7-335 |
| Cow position: | chr20:3376641-3376980 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 171 |
| Conread position: | 10-443 |
| Cow position: | chr20:5668117-5668563 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 149 |
| Conread position: | 26-453 |
| Cow position: | chr20:14864226-14864647 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 39 |
| Conread position: | 35-163 |
| Cow position: | chr20:27976835-27976966 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 35-273 |
| Cow position: | chr20:887561-887325 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 35-418 |
| Cow position: | chr20:15147360-15147735 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 141 |
| Conread position: | 39-233 |
| Cow position: | chr20:17472962-17473153 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 71, 105 |
| Conread position: | 39-274 |
| Cow position: | chr20:7801504-7801728 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 39-278 |
| Cow position: | chr20:23400904-23400679 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 203, 48 |
| Conread position: | 39-278 |
| Cow position: | chr20:23421734-23421965 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 39-278 |
| Cow position: | chr20:30285993-30285761 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 39-358 |
| Cow position: | chr20:21001921-21002239 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 72, 39 |
| Conread position: | 39-365 |
| Cow position: | chr20:33154350-33154678 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 18 |
| Conread position: | 39-410 |
| Cow position: | chr20:36373633-36373981 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 74, 137 |
| Conread position: | 39-419 |
| Cow position: | chr20:31563349-31563723 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 39-449 |
| Cow position: | chr20:13588524-13588933 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 139 |
| Conread position: | 39-452 |
| Cow position: | chr20:22420172-22420575 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 40-233 |
| Cow position: | chr20:16582657-16582845 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 40-255 |
| Cow position: | chr20:20064023-20064237 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 27 |
| Conread position: | 40-257 |
| Cow position: | chr20:21300837-21301052 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 67, 129 |
| Conread position: | 40-278 |
| Cow position: | chr20:22919530-22919758 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 40-309 |
| Cow position: | chr20:2858968-2858712 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 41-278 |
| Cow position: | chr20:36987965-36988199 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 70, 147 |
| Conread position: | 44-264 |
| Cow position: | chr20:20071921-20072141 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 48-330 |
| Cow position: | chr20:31098329-31098043 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 214 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 193, 124 |
| Conread position: | 54-432 |
| Cow position: | chr20:13790612-13790232 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 59, 122 |
| Conread position: | 68-281 |
| Cow position: | chr20:7284456-7284249 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 31, 38 |
| Conread position: | 84-418 |
| Cow position: | chr20:27844615-27844266 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 30, 293 |
| Conread position: | 97-413 |
| Cow position: | chr20:24280528-24280226 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 146, 8 |
| Conread position: | 109-398 |
| Cow position: | chr20:9919030-9918735 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 132, 65 |
| Conread position: | 128-413 |
| Cow position: | chr20:10722855-10722591 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 112, 87 |
| Conread position: | 148-418 |
| Cow position: | chr20:27977186-27977455 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 26 |
| Conread position: | 156-413 |
| Cow position: | chr20:36706949-36707205 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 85, 40 |
| Conread position: | 167-416 |
| Cow position: | chr20:31488414-31488667 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 64 |
| Conread position: | 167-453 |
| Cow position: | chr20:4851671-4851384 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 187-422 |
| Cow position: | chr20:14990348-14990587 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 15 |
| Conread position: | 193-428 |
| Cow position: | chr20:20362247-20362483 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 163 |
| Conread position: | 197-418 |
| Cow position: | chr20:25294084-25293848 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 44, 215 |
| Conread position: | 211-450 |
| Cow position: | chr20:25991612-25991858 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 33, 149 |
| Conread position: | 221-417 |
| Cow position: | chr20:26993226-26993023 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 152 |
| Conread position: | 263-418 |
| Cow position: | chr20:17474373-17474526 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 18, 88 |
| Conread position: | 271-453 |
| Cow position: | chr20:12119213-12119391 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 293-422 |
| Cow position: | chr20:16585260-16585382 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 293-433 |
| Cow position: | chr20:21403435-21403296 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 53 |
Show alignments to all cow chromosomes.