Cow genome map
| Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
| Conread position: | 1-409 |
| Cow position: | chr22:32018001-32018424 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 2-443 |
| Cow position: | chr22:45327765-45327314 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 35, 71 |
| Conread position: | 4-438 |
| Cow position: | chr22:25458455-25458028 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 307 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 6-352 |
| Cow position: | chr22:12536974-12537334 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 170 |
| Conread position: | 14-336 |
| Cow position: | chr22:44037775-44037453 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 240 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 227, 8 |
| Conread position: | 35-349 |
| Cow position: | chr22:13083595-13083301 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 36-161 |
| Cow position: | chr22:40046652-40046523 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 39-225 |
| Cow position: | chr22:24257183-24257367 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 74, 134 |
| Conread position: | 39-253 |
| Cow position: | chr22:29004721-29004935 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 39-257 |
| Cow position: | chr22:44687526-44687302 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 61, 128 |
| Conread position: | 39-273 |
| Cow position: | chr22:22010419-22010648 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 69, 136 |
| Conread position: | 39-276 |
| Cow position: | chr22:40860973-40860727 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 39-278 |
| Cow position: | chr22:5358897-5358661 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 153, 134 |
| Conread position: | 39-344 |
| Cow position: | chr22:4932471-4932154 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 65 |
| Conread position: | 39-345 |
| Cow position: | chr22:41321880-41321568 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 126 |
| Conread position: | 39-410 |
| Cow position: | chr22:42421180-42421553 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 39-413 |
| Cow position: | chr22:7281801-7281423 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 39-417 |
| Cow position: | chr22:29064909-29064534 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 143 |
| Conread position: | 39-453 |
| Cow position: | chr22:44638164-44637756 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 98 |
| Conread position: | 40-328 |
| Cow position: | chr22:34086946-34087248 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 71, 196 |
| Conread position: | 41-241 |
| Cow position: | chr22:32355475-32355664 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 24 |
| Conread position: | 41-254 |
| Cow position: | chr22:24435780-24435992 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 51, 131 |
| Conread position: | 46-290 |
| Cow position: | chr22:39424512-39424280 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 26 |
| Conread position: | 51-419 |
| Cow position: | chr22:4058353-4057980 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 130 |
| Conread position: | 52-278 |
| Cow position: | chr22:12627713-12627937 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 52-410 |
| Cow position: | chr22:26787167-26787526 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 72 |
| Conread position: | 89-278 |
| Cow position: | chr22:45497242-45497051 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 10, 17 |
| Conread position: | 97-278 |
| Cow position: | chr22:23681242-23681065 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 142-430 |
| Cow position: | chr22:246779-246499 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 97, 30 |
| Conread position: | 168-452 |
| Cow position: | chr22:47385503-47385794 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 112, 21 |
| Conread position: | 172-453 |
| Cow position: | chr22:609491-609755 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 178-430 |
| Cow position: | chr22:39904385-39904632 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 101, 11 |
| Conread position: | 187-428 |
| Cow position: | chr22:13997895-13997652 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 196-426 |
| Cow position: | chr22:34886782-34886552 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 50, 150 |
| Conread position: | 200-421 |
| Cow position: | chr22:5714877-5715101 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 164 |
| Conread position: | 252-418 |
| Cow position: | chr22:45291883-45291712 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 22, 163 |
Show alignments to all cow chromosomes.