Cow genome map
| Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
| Conread position: | 1-278 |
| Cow position: | chr23:34514263-34514535 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 1-413 |
| Cow position: | chr23:39069592-39070005 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 85 |
| Conread position: | 4-237 |
| Cow position: | chr23:14573012-14572788 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 109, 30 |
| Conread position: | 7-281 |
| Cow position: | chr23:36483814-36484073 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 102, 27 |
| Conread position: | 20-256 |
| Cow position: | chr23:20024074-20023841 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 221, 46 |
| Conread position: | 24-350 |
| Cow position: | chr23:16479299-16479637 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 48 |
| Conread position: | 35-246 |
| Cow position: | chr23:37036272-37036469 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 35-271 |
| Cow position: | chr23:32845429-32845658 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 127 |
| Conread position: | 35-278 |
| Cow position: | chr23:30691436-30691671 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 35-426 |
| Cow position: | chr23:2783786-2784182 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 35-449 |
| Cow position: | chr23:24400589-24401012 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 141 |
| Conread position: | 36-282 |
| Cow position: | chr23:39823054-39822816 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 39-253 |
| Cow position: | chr23:9425620-9425831 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 72, 139 |
| Conread position: | 39-265 |
| Cow position: | chr23:1682656-1682437 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 39-271 |
| Cow position: | chr23:2330195-2330414 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 39-326 |
| Cow position: | chr23:32549153-32549430 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 76, 50 |
| Conread position: | 39-412 |
| Cow position: | chr23:25409403-25409037 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 63 |
| Conread position: | 39-419 |
| Cow position: | chr23:23917464-23917083 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 154 |
| Conread position: | 39-452 |
| Cow position: | chr23:9546969-9546563 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 72 |
| Conread position: | 39-452 |
| Cow position: | chr23:36674190-36674583 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 129 |
| Conread position: | 39-454 |
| Cow position: | chr23:16171308-16170894 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 146 |
| Conread position: | 40-230 |
| Cow position: | chr23:7571082-7571272 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 36, 84 |
| Conread position: | 40-239 |
| Cow position: | chr23:30127163-30127353 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 40-342 |
| Cow position: | chr23:15147421-15147721 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 73, 23 |
| Conread position: | 40-452 |
| Cow position: | chr23:25078621-25078996 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 66 |
| Conread position: | 41-268 |
| Cow position: | chr23:35654468-35654692 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 67, 94 |
| Conread position: | 42-185 |
| Cow position: | chr23:9723866-9724008 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 43-352 |
| Cow position: | chr23:5258915-5258611 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 56 |
| Conread position: | 46-187 |
| Cow position: | chr23:6963597-6963737 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 57-325 |
| Cow position: | chr23:9654266-9654534 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 135, 42 |
| Conread position: | 68-357 |
| Cow position: | chr23:23285647-23285368 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 29, 69 |
| Conread position: | 91-324 |
| Cow position: | chr23:15694071-15694301 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 97-426 |
| Cow position: | chr23:41255786-41255453 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 248, 214 |
| Conread position: | 122-426 |
| Cow position: | chr23:30301901-30302215 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 146-440 |
| Cow position: | chr23:24520221-24519927 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 152-346 |
| Cow position: | chr23:1250636-1250825 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 89, 22 |
| Conread position: | 169-453 |
| Cow position: | chr23:20217336-20217062 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 34, 50 |
| Conread position: | 172-398 |
| Cow position: | chr23:206318-206111 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 64, 12 |
| Conread position: | 174-413 |
| Cow position: | chr23:6963901-6964132 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 193-452 |
| Cow position: | chr23:38026248-38026499 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 196-425 |
| Cow position: | chr23:777825-778062 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 115 |
| Conread position: | 236-425 |
| Cow position: | chr23:31654535-31654337 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 137 |
| Conread position: | 293-413 |
| Cow position: | chr23:7253412-7253298 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 293-453 |
| Cow position: | chr23:30127630-30127786 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 32, 108 |
Show alignments to all cow chromosomes.