Cow genome map
| Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
| Conread position: | 1-241 |
| Cow position: | chr25:8448072-8447843 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 3-353 |
| Cow position: | chr25:8617804-8618154 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 110, 34 |
| Conread position: | 12-223 |
| Cow position: | chr25:20423482-20423272 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 77, 162 |
| Conread position: | 12-228 |
| Cow position: | chr25:16482476-16482266 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 80 |
| Conread position: | 12-413 |
| Cow position: | chr25:17473265-17472875 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 13-352 |
| Cow position: | chr25:20457201-20457525 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 32, 124 |
| Conread position: | 23-453 |
| Cow position: | chr25:13704612-13704186 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 159 |
| Conread position: | 24-279 |
| Cow position: | chr25:40832835-40833087 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 77, 39 |
| Conread position: | 35-418 |
| Cow position: | chr25:23014735-23014364 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 65 |
| Conread position: | 39-236 |
| Cow position: | chr25:15564765-15564576 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 39-241 |
| Cow position: | chr25:9785463-9785666 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 71, 22 |
| Conread position: | 39-241 |
| Cow position: | chr25:20624386-20624186 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 62, 132 |
| Conread position: | 39-263 |
| Cow position: | chr25:16687528-16687749 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 39-331 |
| Cow position: | chr25:14280017-14279730 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 89, 43 |
| Conread position: | 39-333 |
| Cow position: | chr25:5377065-5377358 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 202, 71 |
| Conread position: | 39-335 |
| Cow position: | chr25:20181050-20180752 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 74, 83 |
| Conread position: | 39-335 |
| Cow position: | chr25:33346211-33345931 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 84, 51 |
| Conread position: | 39-354 |
| Cow position: | chr25:16240038-16240353 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 39-357 |
| Cow position: | chr25:11526453-11526759 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 75, 107 |
| Conread position: | 39-413 |
| Cow position: | chr25:19686167-19686545 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 139 |
| Conread position: | 39-453 |
| Cow position: | chr25:13123798-13123392 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 40-262 |
| Cow position: | chr25:13216354-13216140 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 87 |
| Conread position: | 40-451 |
| Cow position: | chr25:16940272-16940688 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 50-413 |
| Cow position: | chr25:18205744-18206093 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 124 |
| Conread position: | 54-242 |
| Cow position: | chr25:13486895-13486709 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 146 |
| Conread position: | 68-398 |
| Cow position: | chr25:5567186-5567530 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 45, 193 |
| Conread position: | 69-230 |
| Cow position: | chr25:28007845-28008006 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 104 |
| Conread position: | 70-417 |
| Cow position: | chr25:38358634-38358287 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 259 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 88-265 |
| Cow position: | chr25:16429233-16429407 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 97-305 |
| Cow position: | chr25:35037914-35038114 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 97-330 |
| Cow position: | chr25:30036272-30036035 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 144, 7 |
| Conread position: | 107-421 |
| Cow position: | chr25:16193021-16193327 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 136, 65 |
| Conread position: | 111-369 |
| Cow position: | chr25:23559385-23559645 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 64 |
| Conread position: | 111-413 |
| Cow position: | chr25:36235317-36235609 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 131, 62 |
| Conread position: | 124-418 |
| Cow position: | chr25:33925195-33924908 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 125, 50 |
| Conread position: | 138-325 |
| Cow position: | chr25:8358561-8358368 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 50, 36 |
Show alignments to all cow chromosomes.