Cow genome map

Conread name: unkn-MI-P-A1-acn-a-04-1-UM.s1

Conread position: 3-165
Cow position: chr28:27890157-27890324 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 5-418
Cow position: chr28:26626566-26626956 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 30

Conread position: 9-413
Cow position: chr28:2341158-2340754 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 293
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 108, 77

Conread position: 11-241
Cow position: chr28:25926940-25926713 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 99, 70

Conread position: 12-264
Cow position: chr28:16251645-16251887 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 21

Conread position: 24-418
Cow position: chr28:28631168-28630790 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 31, 74

Conread position: 35-197
Cow position: chr28:11379112-11379274 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 138

Conread position: 35-414
Cow position: chr28:34346661-34347035 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 87

Conread position: 35-418
Cow position: chr28:22614489-22614129 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 78, 130

Conread position: 38-158
Cow position: chr28:22831175-22831051 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 39-158
Cow position: chr28:16241107-16241230 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 39-255
Cow position: chr28:6103302-6103091 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 132

Conread position: 39-327
Cow position: chr28:4802880-4803162 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 195
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 58

Conread position: 39-388
Cow position: chr28:5912251-5912611 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 137

Conread position: 39-397
Cow position: chr28:31994042-31994416 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 60, 7

Conread position: 39-418
Cow position: chr28:34117683-34117300 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 36

Conread position: 39-421
Cow position: chr28:10647498-10647872 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 265
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 74, 104

Conread position: 39-428
Cow position: chr28:17762948-17762551 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 174

Conread position: 40-165
Cow position: chr28:11283941-11284071 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 40-418
Cow position: chr28:15350042-15349677 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 64

Conread position: 40-422
Cow position: chr28:7799610-7799983 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 32

Conread position: 40-453
Cow position: chr28:22361216-22360828 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 95

Conread position: 41-271
Cow position: chr28:3898625-3898406 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 200, 47

Conread position: 41-281
Cow position: chr28:20095475-20095227 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 51, 143

Conread position: 52-453
Cow position: chr28:24468626-24468221 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 108

Conread position: 67-418
Cow position: chr28:32284435-32284786 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 47, 109

Conread position: 67-421
Cow position: chr28:6355634-6355284 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 252
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 109

Conread position: 132-352
Cow position: chr28:6277024-6277246 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 109, 46

Conread position: 132-356
Cow position: chr28:17482457-17482667 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 107, 25

Conread position: 132-413
Cow position: chr28:17598521-17598826 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 133-451
Cow position: chr28:11379291-11379620 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 38

Conread position: 146-444
Cow position: chr28:5047684-5047411 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 27

Conread position: 170-453
Cow position: chr28:23390808-23390520 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 73, 26

Conread position: 174-449
Cow position: chr28:16805012-16805287 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 22

Conread position: 189-409
Cow position: chr28:22855717-22855507 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 76

Conread position: 189-416
Cow position: chr28:12226098-12226330 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 50, 167

Conread position: 192-418
Cow position: chr28:16613634-16613416 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 48, 111

Conread position: 192-427
Cow position: chr28:7595242-7595481 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 49, 9

Conread position: 196-395
Cow position: chr28:22051879-22051679 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 147

Conread position: 196-418
Cow position: chr28:7020293-7020513 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 86, 34

Conread position: 196-428
Cow position: chr28:480290-480526 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 42, 83

Conread position: 271-419
Cow position: chr28:22830284-22830138 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 79

Show alignments to all cow chromosomes.