Cow genome map
Conread name: | unkn-MI-P-A1-acn-a-04-1-UM.s1 |
Conread position: | 1-221 |
Cow position: | chr5:5830547-5830767 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 22, 112 |
Conread position: | 3-304 |
Cow position: | chr5:66116916-66117205 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 201 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 170, 31 |
Conread position: | 4-436 |
Cow position: | chr5:35584265-35583837 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 298 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 110, 132 |
Conread position: | 4-444 |
Cow position: | chr5:57964676-57965094 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 314 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 58, 27 |
Conread position: | 6-253 |
Cow position: | chr5:67579684-67579447 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 191 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 105, 17 |
Conread position: | 6-281 |
Cow position: | chr5:54158085-54157813 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 108, 28 |
Conread position: | 7-417 |
Cow position: | chr5:51953512-51953099 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 28 |
Conread position: | 12-278 |
Cow position: | chr5:20648630-20648890 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 198 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 90, 23 |
Conread position: | 21-279 |
Cow position: | chr5:31551450-31551202 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 192 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 22-396 |
Cow position: | chr5:14071961-14072324 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 91, 13 |
Conread position: | 23-353 |
Cow position: | chr5:67463835-67463500 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 159 |
Conread position: | 24-281 |
Cow position: | chr5:33516152-33516416 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 197 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 87, 152 |
Conread position: | 24-351 |
Cow position: | chr5:12329078-12329409 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 254 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 89, 16 |
Conread position: | 24-439 |
Cow position: | chr5:42587286-42587714 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 172 |
Conread position: | 35-278 |
Cow position: | chr5:12581302-12581079 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 78, 26 |
Conread position: | 35-281 |
Cow position: | chr5:47697779-47698023 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 190 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 95 |
Conread position: | 35-313 |
Cow position: | chr5:9025791-9025506 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 213 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 69, 141 |
Conread position: | 35-334 |
Cow position: | chr5:15704956-15705253 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 219 |
Alignm E-value: | 8.00001e-41 |
Alignm gaps (pig, cow): | 74, 136 |
Conread position: | 35-346 |
Cow position: | chr5:27679213-27679530 (view UCSC Genome Browser custom track) |
Alignm length: | 324 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 140 |
Conread position: | 35-411 |
Cow position: | chr5:56109559-56109926 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 31 |
Conread position: | 35-414 |
Cow position: | chr5:1304618-1305008 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 266 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 77, 104 |
Conread position: | 35-453 |
Cow position: | chr5:37048652-37048261 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 71 |
Conread position: | 36-281 |
Cow position: | chr5:60725870-60725629 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 182 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 77, 126 |
Conread position: | 37-278 |
Cow position: | chr5:15808315-15808550 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 204, 67 |
Conread position: | 37-278 |
Cow position: | chr5:19298868-19299107 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 196 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 39, 128 |
Conread position: | 37-363 |
Cow position: | chr5:71279255-71278929 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 13 |
Conread position: | 39-160 |
Cow position: | chr5:59640179-59640054 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 39-176 |
Cow position: | chr5:57629688-57629828 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 69, 133 |
Conread position: | 39-178 |
Cow position: | chr5:65590502-65590645 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 74, 0 |
Conread position: | 39-181 |
Cow position: | chr5:62580584-62580438 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 118 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 39-187 |
Cow position: | chr5:67002046-67001894 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 74, 138 |
Conread position: | 39-233 |
Cow position: | chr5:33443033-33443236 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 142 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 63, 136 |
Conread position: | 39-252 |
Cow position: | chr5:37624681-37624468 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 170 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 62, 117 |
Conread position: | 39-268 |
Cow position: | chr5:57490761-57490532 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 156 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 71, 83 |
Conread position: | 39-275 |
Cow position: | chr5:12602498-12602272 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 178 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 74, 131 |
Conread position: | 39-277 |
Cow position: | chr5:70532831-70532577 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 171 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 39-278 |
Cow position: | chr5:29029949-29029709 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 84 |
Conread position: | 39-278 |
Cow position: | chr5:56826649-56826412 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 192 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 66, 44 |
Conread position: | 39-334 |
Cow position: | chr5:11236185-11235880 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 217 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 72, 135 |
Conread position: | 39-346 |
Cow position: | chr5:33570457-33570172 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 231 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 70, 83 |
Conread position: | 39-354 |
Cow position: | chr5:35749142-35748826 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 237 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 74, 85 |
Conread position: | 39-395 |
Cow position: | chr5:39118750-39118428 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 248 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 39-412 |
Cow position: | chr5:29431064-29431412 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 259 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 51, 37 |
Conread position: | 39-418 |
Cow position: | chr5:45911708-45912066 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 274 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 75, 28 |
Conread position: | 39-425 |
Cow position: | chr5:38274389-38273990 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 276 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 69, 322 |
Conread position: | 39-438 |
Cow position: | chr5:26098083-26098462 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 280 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 206, 24 |
Conread position: | 39-450 |
Cow position: | chr5:51076018-51076434 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 80 |
Conread position: | 39-452 |
Cow position: | chr5:27493340-27492905 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 33 |
Conread position: | 39-453 |
Cow position: | chr5:21145621-21146028 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 139 |
Conread position: | 40-220 |
Cow position: | chr5:31461813-31461628 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 148 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 73, 140 |
Conread position: | 40-255 |
Cow position: | chr5:9232671-9232875 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 168 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 73, 34 |
Conread position: | 40-413 |
Cow position: | chr5:9585146-9585501 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 275 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 73, 33 |
Conread position: | 40-453 |
Cow position: | chr5:23235065-23234674 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 39 |
Conread position: | 42-235 |
Cow position: | chr5:38911771-38911566 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 46-428 |
Cow position: | chr5:7584244-7584617 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 272 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 68, 135 |
Conread position: | 50-278 |
Cow position: | chr5:18379836-18379621 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 63, 83 |
Conread position: | 51-418 |
Cow position: | chr5:28770848-28770489 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 118 |
Conread position: | 52-344 |
Cow position: | chr5:34482958-34483249 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 214 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 125, 41 |
Conread position: | 52-418 |
Cow position: | chr5:15881859-15882228 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 272 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 56, 105 |
Conread position: | 67-350 |
Cow position: | chr5:53921976-53922254 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 210 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 51 |
Conread position: | 67-417 |
Cow position: | chr5:63621125-63620784 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 251 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 37, 105 |
Conread position: | 67-438 |
Cow position: | chr5:72755627-72755262 (view UCSC Genome Browser custom track) |
Alignm length: | 389 |
Alignm identity: | 261 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 47, 107 |
Conread position: | 67-450 |
Cow position: | chr5:60969017-60968626 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 91 |
Conread position: | 68-233 |
Cow position: | chr5:54761609-54761446 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 132 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 29, 113 |
Conread position: | 68-235 |
Cow position: | chr5:31944169-31944004 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 133 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 41, 109 |
Conread position: | 68-277 |
Cow position: | chr5:20717693-20717495 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 150 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 107 |
Conread position: | 68-278 |
Cow position: | chr5:1286943-1286731 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 164 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 45, 84 |
Conread position: | 74-273 |
Cow position: | chr5:70253238-70253037 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 149 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 74-416 |
Cow position: | chr5:13575180-13575534 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 102 |
Conread position: | 77-411 |
Cow position: | chr5:56742223-56741892 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 251 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 13, 85 |
Conread position: | 78-274 |
Cow position: | chr5:39206729-39206920 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 149 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 94, 0 |
Conread position: | 89-453 |
Cow position: | chr5:57128002-57127651 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 161, 15 |
Conread position: | 149-413 |
Cow position: | chr5:25925379-25925642 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 201 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 92, 29 |
Conread position: | 153-335 |
Cow position: | chr5:26161499-26161691 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 147 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 14, 152 |
Conread position: | 167-416 |
Cow position: | chr5:53599575-53599825 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 22 |
Conread position: | 186-417 |
Cow position: | chr5:38970855-38970619 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 168 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 46 |
Conread position: | 187-447 |
Cow position: | chr5:49635124-49635375 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 180 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 53, 9 |
Conread position: | 189-427 |
Cow position: | chr5:55985355-55985600 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 183 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 50, 146 |
Conread position: | 196-426 |
Cow position: | chr5:30335924-30336150 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 161 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 86, 154 |
Conread position: | 196-430 |
Cow position: | chr5:21937279-21937504 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 160 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 89, 21 |
Conread position: | 198-433 |
Cow position: | chr5:6149573-6149811 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 175 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 43, 162 |
Conread position: | 211-437 |
Cow position: | chr5:62580241-62580017 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 32, 67 |
Conread position: | 226-429 |
Cow position: | chr5:38911491-38911282 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 54, 13 |
Conread position: | 284-453 |
Cow position: | chr5:20649190-20649360 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 130 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 12, 42 |
Conread position: | 293-428 |
Cow position: | chr5:73051473-73051337 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 124, 49 |
Conread position: | 293-448 |
Cow position: | chr5:50156233-50156377 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 117 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 294-453 |
Cow position: | chr5:56826143-56825984 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 131 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 122, 64 |
Conread position: | 299-453 |
Cow position: | chr5:10785877-10786024 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 117 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.