Cow genome map
| Conread name: | unkn-MI-P-A3-abv-f-03-1-UM.s1 |
| Conread position: | 13-319 |
| Cow position: | chr7:59092094-59091791 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 133, 92 |
| Conread position: | 32-251 |
| Cow position: | chr7:13779373-13779155 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 313-628 |
| Cow position: | chr7:16223443-16223123 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 176 |
| Conread position: | 378-642 |
| Cow position: | chr7:13053155-13052888 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 34 |
| Conread position: | 379-642 |
| Cow position: | chr7:14892166-14891914 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 16 |
| Conread position: | 387-642 |
| Cow position: | chr7:28158421-28158669 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 52, 8 |
| Conread position: | 388-641 |
| Cow position: | chr7:18353042-18352790 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 33, 27 |
| Conread position: | 392-641 |
| Cow position: | chr7:28960388-28960136 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 395-639 |
| Cow position: | chr7:6193892-6193648 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 75 |
| Conread position: | 395-642 |
| Cow position: | chr7:28325811-28326053 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 29 |
| Conread position: | 396-641 |
| Cow position: | chr7:7889969-7890224 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 29, 95 |
| Conread position: | 396-642 |
| Cow position: | chr7:16094909-16095162 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 135 |
| Conread position: | 396-642 |
| Cow position: | chr7:28347186-28347435 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 192 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 403-638 |
| Cow position: | chr7:15750082-15749844 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 404-639 |
| Cow position: | chr7:16217264-16217502 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 407-642 |
| Cow position: | chr7:26600001-26599761 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 408-642 |
| Cow position: | chr7:17796333-17796571 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 411-642 |
| Cow position: | chr7:17834740-17834514 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 412-640 |
| Cow position: | chr7:10272317-10272094 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 412-642 |
| Cow position: | chr7:10717544-10717317 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 77 |
| Conread position: | 412-642 |
| Cow position: | chr7:10822676-10822905 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 412-642 |
| Cow position: | chr7:11515026-11514791 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 414-623 |
| Cow position: | chr7:16515553-16515352 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 76 |
| Conread position: | 414-640 |
| Cow position: | chr7:17710964-17710742 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 414-642 |
| Cow position: | chr7:29131887-29131660 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 7, 77 |
| Conread position: | 415-634 |
| Cow position: | chr7:13285392-13285167 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 76 |
| Conread position: | 421-642 |
| Cow position: | chr7:14791155-14790944 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 29, 66 |
| Conread position: | 422-639 |
| Cow position: | chr7:26388953-26389178 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 422-640 |
| Cow position: | chr7:15814368-15814146 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 68 |
| Conread position: | 422-642 |
| Cow position: | chr7:16530050-16530261 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 176 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 169, 35 |
| Conread position: | 422-642 |
| Cow position: | chr7:17628782-17628562 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 424-633 |
| Cow position: | chr7:1740628-1740838 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 424-642 |
| Cow position: | chr7:29068192-29068419 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 427-642 |
| Cow position: | chr7:16204853-16204643 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 428-643 |
| Cow position: | chr7:17793402-17793184 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 13, 62 |
| Conread position: | 438-639 |
| Cow position: | chr7:14736285-14736071 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 454-642 |
| Cow position: | chr7:10647290-10647476 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 137, 30 |
| Conread position: | 454-642 |
| Cow position: | chr7:14723089-14722907 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 137, 32 |
| Conread position: | 457-641 |
| Cow position: | chr7:12228677-12228867 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 457-642 |
| Cow position: | chr7:8646256-8646447 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 104, 27 |
| Conread position: | 457-642 |
| Cow position: | chr7:28080567-28080387 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 134, 23 |
| Conread position: | 463-639 |
| Cow position: | chr7:15432445-15432613 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 463-641 |
| Cow position: | chr7:11784236-11784060 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 21 |
| Conread position: | 473-625 |
| Cow position: | chr7:18189466-18189605 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 473-639 |
| Cow position: | chr7:13824373-13824205 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 118, 11 |
| Conread position: | 474-637 |
| Cow position: | chr7:14173092-14173248 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 486-641 |
| Cow position: | chr7:12450253-12450402 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 113, 25 |
| Conread position: | 486-642 |
| Cow position: | chr7:12222632-12222783 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 495-644 |
| Cow position: | chr7:17670948-17671097 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 77, 12 |
Show alignments to all cow chromosomes.