Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 19-173 |
| Cow position: | chr10:45769084-45769247 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-204 |
| Cow position: | chr10:10147649-10147838 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-210 |
| Cow position: | chr10:6850544-6850740 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-210 |
| Cow position: | chr10:16091404-16091605 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-210 |
| Cow position: | chr10:21081159-21081363 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-210 |
| Cow position: | chr10:60959934-60960133 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 19-246 |
| Cow position: | chr10:76421-76642 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 19-261 |
| Cow position: | chr10:23935074-23935303 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 19-261 |
| Cow position: | chr10:29815608-29815855 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 121 |
| Conread position: | 19-269 |
| Cow position: | chr10:49145564-49145816 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 42, 128 |
| Conread position: | 19-275 |
| Cow position: | chr10:10101127-10101380 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 19-275 |
| Cow position: | chr10:22528897-22528641 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 170 |
| Conread position: | 19-275 |
| Cow position: | chr10:23913531-23913279 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 136 |
| Conread position: | 19-275 |
| Cow position: | chr10:27120588-27120337 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 202 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 19-275 |
| Cow position: | chr10:31816774-31816520 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 195 |
| Conread position: | 23-175 |
| Cow position: | chr10:9445954-9445793 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 23-261 |
| Cow position: | chr10:2612414-2612662 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 24-238 |
| Cow position: | chr10:20446140-20446362 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 42, 209 |
| Conread position: | 24-247 |
| Cow position: | chr10:34666584-34666355 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 24-275 |
| Cow position: | chr10:15867264-15867514 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 24-275 |
| Cow position: | chr10:45484681-45484433 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 25-238 |
| Cow position: | chr10:51864010-51863804 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 169 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 70, 38 |
| Conread position: | 25-274 |
| Cow position: | chr10:46194802-46195057 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 37, 187 |
| Conread position: | 25-275 |
| Cow position: | chr10:6253475-6253232 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 41, 104 |
| Conread position: | 28-162 |
| Cow position: | chr10:22579486-22579343 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 28-210 |
| Cow position: | chr10:42643881-42644071 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 38, 113 |
| Conread position: | 28-213 |
| Cow position: | chr10:64287043-64286853 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 28-223 |
| Cow position: | chr10:3997955-3998148 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 28-275 |
| Cow position: | chr10:2856145-2856390 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 36, 105 |
| Conread position: | 29-275 |
| Cow position: | chr10:39876118-39875867 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 223 |
| Conread position: | 30-224 |
| Cow position: | chr10:21656457-21656656 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 94 |
| Conread position: | 31-275 |
| Cow position: | chr10:8094296-8094057 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 35, 181 |
| Conread position: | 34-244 |
| Cow position: | chr10:6243380-6243165 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 32, 102 |
| Conread position: | 34-256 |
| Cow position: | chr10:40106098-40106323 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 178 |
| Conread position: | 37-275 |
| Cow position: | chr10:47772755-47772998 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 194 |
| Conread position: | 42-162 |
| Cow position: | chr10:22984383-22984255 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 43-210 |
| Cow position: | chr10:38911425-38911253 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 54-271 |
| Cow position: | chr10:4640993-4640784 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr10:8459587-8459796 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 153 |
| Conread position: | 54-271 |
| Cow position: | chr10:23648929-23648720 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr10:28235868-28236074 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 12, 70 |
| Conread position: | 54-271 |
| Cow position: | chr10:32282378-32282587 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr10:37041359-37041568 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr10:62405431-62405223 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 12, 156 |
| Conread position: | 57-271 |
| Cow position: | chr10:51558770-51558973 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 63-271 |
| Cow position: | chr10:2117073-2116876 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr10:9681797-9681600 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr10:10082706-10082509 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr10:26922913-26922716 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr10:53827957-53828155 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 122, 131 |
| Conread position: | 63-273 |
| Cow position: | chr10:2736390-2736588 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 63-273 |
| Cow position: | chr10:21490313-21490507 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 64-271 |
| Cow position: | chr10:38843501-38843696 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
Show alignments to all cow chromosomes.