Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 13-269 |
| Cow position: | chr11:14469465-14469710 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 53, 11 |
| Conread position: | 18-210 |
| Cow position: | chr11:53280440-53280239 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 48, 83 |
| Conread position: | 18-234 |
| Cow position: | chr11:44233384-44233603 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 5, 17 |
| Conread position: | 18-275 |
| Cow position: | chr11:48428101-48428355 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 48, 180 |
| Conread position: | 19-193 |
| Cow position: | chr11:13062446-13062263 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 19-250 |
| Cow position: | chr11:56227890-56228125 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 47, 79 |
| Conread position: | 19-269 |
| Cow position: | chr11:40487114-40487362 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 124 |
| Conread position: | 19-271 |
| Cow position: | chr11:21729059-21728809 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 19-271 |
| Cow position: | chr11:52298202-52297950 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 213 |
| Conread position: | 19-271 |
| Cow position: | chr11:58399293-58399538 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 19-271 |
| Cow position: | chr11:59871776-59872022 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 126 |
| Conread position: | 19-271 |
| Cow position: | chr11:73513411-73513160 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 47, 148 |
| Conread position: | 19-275 |
| Cow position: | chr11:260189-259918 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 31, 181 |
| Conread position: | 19-275 |
| Cow position: | chr11:10365435-10365187 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 47, 111 |
| Conread position: | 19-275 |
| Cow position: | chr11:12763219-12762971 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 44 |
| Conread position: | 19-275 |
| Cow position: | chr11:19507291-19507542 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 22-234 |
| Cow position: | chr11:67746377-67746594 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 208 |
| Conread position: | 24-212 |
| Cow position: | chr11:49935782-49935585 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 159 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 24-261 |
| Cow position: | chr11:75511222-75510974 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 190 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 42, 229 |
| Conread position: | 28-202 |
| Cow position: | chr11:38638355-38638175 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 28-204 |
| Cow position: | chr11:8844149-8844334 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 28-271 |
| Cow position: | chr11:85390885-85390651 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 31, 182 |
| Conread position: | 28-275 |
| Cow position: | chr11:30057176-30057414 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 38, 122 |
| Conread position: | 29-275 |
| Cow position: | chr11:75354179-75354421 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 182 |
| Conread position: | 34-221 |
| Cow position: | chr11:42358178-42358363 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 54-268 |
| Cow position: | chr11:44154081-44153875 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 12, 97 |
| Conread position: | 54-271 |
| Cow position: | chr11:4024349-4024144 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 50, 8 |
| Conread position: | 54-271 |
| Cow position: | chr11:10851116-10851324 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 54-271 |
| Cow position: | chr11:11990999-11991210 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 54-271 |
| Cow position: | chr11:12353890-12353681 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr11:19099483-19099274 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 54-271 |
| Cow position: | chr11:35738342-35738133 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr11:38832477-38832268 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr11:46781067-46780859 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 56-271 |
| Cow position: | chr11:32077776-32077572 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 57-271 |
| Cow position: | chr11:33601631-33601428 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 57-271 |
| Cow position: | chr11:40773062-40772859 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 57-274 |
| Cow position: | chr11:3238309-3238516 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 152 |
| Conread position: | 63-271 |
| Cow position: | chr11:58139708-58139905 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr11:70030433-70030630 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 80, 87 |
Show alignments to all cow chromosomes.