Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 19-146 |
| Cow position: | chr13:53575038-53574907 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 19-204 |
| Cow position: | chr13:44323925-44323735 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 19-206 |
| Cow position: | chr13:38013619-38013425 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 47, 122 |
| Conread position: | 19-210 |
| Cow position: | chr13:48945902-48945709 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 47, 109 |
| Conread position: | 19-271 |
| Cow position: | chr13:21134768-21135033 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 19-271 |
| Cow position: | chr13:30431168-30431419 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 186, 41 |
| Conread position: | 19-275 |
| Cow position: | chr13:12618157-12618406 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 11 |
| Conread position: | 19-275 |
| Cow position: | chr13:17456136-17456388 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 19-275 |
| Cow position: | chr13:19843506-19843757 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 47, 158 |
| Conread position: | 19-275 |
| Cow position: | chr13:34051658-34051915 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 115 |
| Conread position: | 22-204 |
| Cow position: | chr13:4663661-4663851 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 24-191 |
| Cow position: | chr13:3001310-3001134 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 24-246 |
| Cow position: | chr13:15256929-15257155 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 207 |
| Conread position: | 24-275 |
| Cow position: | chr13:15429894-15429636 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 24-275 |
| Cow position: | chr13:41807681-41807451 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 99, 37 |
| Conread position: | 28-204 |
| Cow position: | chr13:19394079-19393894 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 28-248 |
| Cow position: | chr13:11822886-11822653 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 28-249 |
| Cow position: | chr13:60392578-60392807 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 189 |
| Conread position: | 28-250 |
| Cow position: | chr13:22907222-22906995 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 38, 153 |
| Conread position: | 28-265 |
| Cow position: | chr13:47357549-47357298 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 29-210 |
| Cow position: | chr13:21905866-21905676 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 153 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 34-244 |
| Cow position: | chr13:52085250-52085033 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 32, 198 |
| Conread position: | 34-271 |
| Cow position: | chr13:2805231-2804996 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 183 |
| Conread position: | 44-255 |
| Cow position: | chr13:15458774-15458988 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 57, 19 |
| Conread position: | 54-271 |
| Cow position: | chr13:15921383-15921174 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 63-271 |
| Cow position: | chr13:2799973-2800170 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-275 |
| Cow position: | chr13:24059416-24059617 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 145, 0 |
Show alignments to all cow chromosomes.