Cow genome map

Conread name: unkn-MI-P-A3-abw-f-04-1-UM.s1

Conread position: 19-187
Cow position: chr16:48371541-48371364 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 19-197
Cow position: chr16:39475391-39475583 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 19-210
Cow position: chr16:47772826-47773026 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 163
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 19-269
Cow position: chr16:5833361-5833614 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 190
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 47, 6

Conread position: 19-271
Cow position: chr16:7504001-7504245 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 123

Conread position: 19-271
Cow position: chr16:49516222-49515969 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 71

Conread position: 19-275
Cow position: chr16:237043-237293 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 88

Conread position: 19-275
Cow position: chr16:24147220-24147466 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 196
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 47, 189

Conread position: 19-275
Cow position: chr16:25168798-25169042 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 186, 0

Conread position: 19-275
Cow position: chr16:45755060-45754819 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 47, 115

Conread position: 22-210
Cow position: chr16:14029584-14029399 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 38

Conread position: 24-253
Cow position: chr16:49142506-49142270 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 207

Conread position: 25-275
Cow position: chr16:48341639-48341391 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 41, 84

Conread position: 27-204
Cow position: chr16:42751721-42751898 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 36

Conread position: 28-175
Cow position: chr16:20634643-20634494 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 72

Conread position: 28-177
Cow position: chr16:54287109-54287270 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 28-274
Cow position: chr16:24445011-24445267 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 189

Conread position: 30-210
Cow position: chr16:17141976-17142166 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 36, 126

Conread position: 31-271
Cow position: chr16:8871868-8871629 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 35, 63

Conread position: 31-275
Cow position: chr16:47018175-47017938 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 14

Conread position: 37-234
Cow position: chr16:39615802-39616005 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 29, 175

Conread position: 37-261
Cow position: chr16:48010813-48010582 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 29, 91

Conread position: 47-275
Cow position: chr16:42745882-42745668 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 54-268
Cow position: chr16:28468520-28468314 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 12, 157

Conread position: 54-269
Cow position: chr16:26666307-26666514 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr16:5350905-5350696 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr16:11633241-11633032 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 157

Conread position: 54-271
Cow position: chr16:25344582-25344791 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr16:39033742-39033533 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 12, 157

Conread position: 54-275
Cow position: chr16:2724621-2724408 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 157

Conread position: 57-271
Cow position: chr16:1734348-1734551 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 0

Conread position: 57-271
Cow position: chr16:24240791-24240588 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 151, 0

Conread position: 63-271
Cow position: chr16:3148425-3148227 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 146

Conread position: 63-271
Cow position: chr16:3769396-3769196 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 148

Conread position: 63-271
Cow position: chr16:5435440-5435637 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 0

Conread position: 63-271
Cow position: chr16:48411250-48411447 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 0

Conread position: 64-271
Cow position: chr16:43894646-43894449 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 145

Conread position: 67-271
Cow position: chr16:6380018-6379827 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 9, 0

Conread position: 69-271
Cow position: chr16:1563767-1563576 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 69-271
Cow position: chr16:25444497-25444688 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 139, 0

Show alignments to all cow chromosomes.