Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 17-271 |
| Cow position: | chr21:28988714-28988957 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 71, 46 |
| Conread position: | 19-155 |
| Cow position: | chr21:49091120-49090986 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 19-175 |
| Cow position: | chr21:14727111-14727273 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 19-210 |
| Cow position: | chr21:24887069-24887269 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 19-210 |
| Cow position: | chr21:42842858-42842665 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 19-210 |
| Cow position: | chr21:48234891-48234696 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 19-245 |
| Cow position: | chr21:48262240-48262469 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 47, 177 |
| Conread position: | 19-250 |
| Cow position: | chr21:37298564-37298800 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 47, 177 |
| Conread position: | 19-261 |
| Cow position: | chr21:18837226-18836971 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 19-267 |
| Cow position: | chr21:31275767-31276012 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 47, 194 |
| Conread position: | 19-270 |
| Cow position: | chr21:18829454-18829205 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 87 |
| Conread position: | 19-275 |
| Cow position: | chr21:81170-81422 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 19-275 |
| Cow position: | chr21:2905368-2905115 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 19-275 |
| Cow position: | chr21:22463615-22463870 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 160 |
| Conread position: | 19-275 |
| Cow position: | chr21:33983851-33983595 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 47, 196 |
| Conread position: | 22-210 |
| Cow position: | chr21:48195878-48196066 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 44, 93 |
| Conread position: | 22-246 |
| Cow position: | chr21:38450561-38450332 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 23-275 |
| Cow position: | chr21:4791544-4791791 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 43, 119 |
| Conread position: | 28-210 |
| Cow position: | chr21:9863505-9863322 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 34-275 |
| Cow position: | chr21:22855346-22855575 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 62, 16 |
| Conread position: | 37-210 |
| Cow position: | chr21:39400678-39400859 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 29, 84 |
| Conread position: | 42-275 |
| Cow position: | chr21:16768676-16768445 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 187 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 24, 172 |
| Conread position: | 54-267 |
| Cow position: | chr21:47648808-47649012 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 54-268 |
| Cow position: | chr21:27608237-27608031 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr21:17144153-17144362 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 16, 157 |
| Conread position: | 54-275 |
| Cow position: | chr21:23585557-23585770 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 173 |
| Conread position: | 57-271 |
| Cow position: | chr21:43403967-43403764 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 57-275 |
| Cow position: | chr21:46974262-46974056 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 63-271 |
| Cow position: | chr21:27066122-27065925 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr21:30595613-30595416 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr21:33257033-33257230 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
Show alignments to all cow chromosomes.