Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 19-172 |
| Cow position: | chr3:77726630-77726788 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 19-182 |
| Cow position: | chr3:10412422-10412593 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 47, 159 |
| Conread position: | 19-210 |
| Cow position: | chr3:10371550-10371747 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 47, 148 |
| Conread position: | 19-210 |
| Cow position: | chr3:12673199-12673003 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 19-210 |
| Cow position: | chr3:15663268-15663073 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-210 |
| Cow position: | chr3:16657693-16657499 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-247 |
| Cow position: | chr3:6897003-6897234 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 46, 211 |
| Conread position: | 19-271 |
| Cow position: | chr3:25753430-25753688 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 19-271 |
| Cow position: | chr3:34393111-34392859 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 52, 207 |
| Conread position: | 19-275 |
| Cow position: | chr3:13352952-13352693 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 47, 78 |
| Conread position: | 21-246 |
| Cow position: | chr3:26566953-26567185 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 195 |
| Conread position: | 22-210 |
| Cow position: | chr3:31748857-31749052 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 23-269 |
| Cow position: | chr3:52257335-52257093 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 23-270 |
| Cow position: | chr3:15988119-15988364 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 178 |
| Conread position: | 24-203 |
| Cow position: | chr3:45880924-45881106 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 24-210 |
| Cow position: | chr3:21303384-21303209 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 98, 58 |
| Conread position: | 24-275 |
| Cow position: | chr3:24455350-24455108 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 46, 112 |
| Conread position: | 24-275 |
| Cow position: | chr3:37983185-37982936 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 192 |
| Conread position: | 28-168 |
| Cow position: | chr3:77225918-77226065 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 73 |
| Conread position: | 28-193 |
| Cow position: | chr3:82891216-82891385 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 28-208 |
| Cow position: | chr3:80818001-80818193 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 28-212 |
| Cow position: | chr3:20781264-20781082 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 149 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 28-229 |
| Cow position: | chr3:30938681-30938891 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 188 |
| Conread position: | 28-256 |
| Cow position: | chr3:58766328-58766563 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 187 |
| Conread position: | 28-275 |
| Cow position: | chr3:7677676-7677928 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 196 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 54-271 |
| Cow position: | chr3:5887102-5887309 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 98 |
| Conread position: | 54-271 |
| Cow position: | chr3:11784580-11784785 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 54-271 |
| Cow position: | chr3:18814723-18814931 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 156 |
| Conread position: | 54-271 |
| Cow position: | chr3:48603469-48603687 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 54-271 |
| Cow position: | chr3:59864696-59864905 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 57-271 |
| Cow position: | chr3:73451091-73450888 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 57-275 |
| Cow position: | chr3:39214596-39214806 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 29, 25 |
| Conread position: | 57-275 |
| Cow position: | chr3:76187761-76187978 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 63-271 |
| Cow position: | chr3:7476692-7476494 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 99, 146 |
| Conread position: | 63-271 |
| Cow position: | chr3:19216128-19216326 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 146 |
| Conread position: | 63-271 |
| Cow position: | chr3:23287108-23286911 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr3:36874832-36874635 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 91-275 |
| Cow position: | chr3:75479119-75479290 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.