Cow genome map

Conread name: unkn-MI-P-A3-abw-f-04-1-UM.s1

Conread position: 10-238
Cow position: chr4:22904653-22904887 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 168

Conread position: 19-178
Cow position: chr4:12454945-12455111 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 135
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 47, 158

Conread position: 19-178
Cow position: chr4:13254645-13254812 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 47, 159

Conread position: 19-183
Cow position: chr4:34222931-34223101 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 122

Conread position: 19-204
Cow position: chr4:4126718-4126909 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 46, 115

Conread position: 19-204
Cow position: chr4:43840998-43840806 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 101

Conread position: 19-210
Cow position: chr4:962609-962412 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 86

Conread position: 19-210
Cow position: chr4:4185159-4185357 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 104

Conread position: 19-212
Cow position: chr4:23493958-23494147 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 39, 77

Conread position: 19-222
Cow position: chr4:3284377-3284165 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 0

Conread position: 19-261
Cow position: chr4:25983270-25983521 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 47, 136

Conread position: 19-271
Cow position: chr4:1239441-1239192 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 60

Conread position: 19-274
Cow position: chr4:3849580-3849839 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 102

Conread position: 19-275
Cow position: chr4:19140983-19141253 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 237

Conread position: 19-275
Cow position: chr4:27539644-27539903 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 114

Conread position: 24-245
Cow position: chr4:34700566-34700340 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 42, 129

Conread position: 24-275
Cow position: chr4:4086378-4086133 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 40, 201

Conread position: 25-275
Cow position: chr4:66174334-66174086 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 189

Conread position: 28-210
Cow position: chr4:54189760-54189945 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 152
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 6

Conread position: 28-238
Cow position: chr4:27292898-27292680 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 28-271
Cow position: chr4:16606185-16605931 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 28-275
Cow position: chr4:26468221-26468462 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 92

Conread position: 29-210
Cow position: chr4:11192946-11193139 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 155
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 133

Conread position: 31-210
Cow position: chr4:67600677-67600494 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 124

Conread position: 34-273
Cow position: chr4:41037824-41038070 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 71

Conread position: 54-271
Cow position: chr4:3449824-3450033 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 8, 157

Conread position: 54-271
Cow position: chr4:16641840-16642049 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr4:23304319-23304110 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr4:27177848-27178058 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 142

Conread position: 54-271
Cow position: chr4:36026249-36026040 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr4:43316627-43316418 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 157

Conread position: 54-275
Cow position: chr4:39457682-39457904 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 166

Conread position: 57-271
Cow position: chr4:17876985-17877189 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 57-274
Cow position: chr4:1006921-1007126 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 160
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 63-271
Cow position: chr4:19957059-19957258 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 147

Conread position: 63-271
Cow position: chr4:26874874-26874677 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 145, 0

Conread position: 63-271
Cow position: chr4:33496595-33496790 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 63-271
Cow position: chr4:48029892-48030089 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 145, 0

Conread position: 63-271
Cow position: chr4:57987779-57987974 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 119-267
Cow position: chr4:37703406-37703543 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 0

Show alignments to all cow chromosomes.