Cow genome map

Conread name: unkn-MI-P-A3-abw-f-04-1-UM.s1

Conread position: 16-275
Cow position: chr6:10694939-10695195 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 124

Conread position: 19-151
Cow position: chr6:18963124-18962984 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 19-210
Cow position: chr6:8634085-8633904 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 19-234
Cow position: chr6:46283879-46283659 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 47, 174

Conread position: 19-249
Cow position: chr6:6459331-6459566 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 53, 165

Conread position: 19-271
Cow position: chr6:53461959-53461700 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 42, 230

Conread position: 19-275
Cow position: chr6:1498418-1498675 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 201
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 47, 194

Conread position: 19-275
Cow position: chr6:3893422-3893161 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 47, 91

Conread position: 19-275
Cow position: chr6:9322223-9322477 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 46, 82

Conread position: 19-275
Cow position: chr6:11193367-11193107 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 82

Conread position: 19-275
Cow position: chr6:32018895-32018630 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 208

Conread position: 19-275
Cow position: chr6:35600899-35601151 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 47, 200

Conread position: 22-204
Cow position: chr6:6601672-6601495 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 148
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 41, 0

Conread position: 23-178
Cow position: chr6:54472422-54472258 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 24-175
Cow position: chr6:65868009-65868169 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 24-271
Cow position: chr6:52249289-52249038 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 169

Conread position: 25-275
Cow position: chr6:38438832-38439085 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 41, 195

Conread position: 28-244
Cow position: chr6:29484210-29484429 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 105

Conread position: 29-173
Cow position: chr6:65848138-65847986 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 8

Conread position: 30-271
Cow position: chr6:32286782-32287024 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 185

Conread position: 34-204
Cow position: chr6:29689092-29689272 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 34-228
Cow position: chr6:52977923-52977731 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 54-267
Cow position: chr6:60876557-60876762 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr6:8754194-8753985 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr6:17049634-17049843 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr6:24242548-24242757 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr6:48873063-48872854 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 12, 157

Conread position: 54-271
Cow position: chr6:55539010-55538801 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 142

Conread position: 54-275
Cow position: chr6:39999198-39998985 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 157

Conread position: 57-271
Cow position: chr6:17111898-17111696 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 57-271
Cow position: chr6:27475670-27475886 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 111

Conread position: 57-274
Cow position: chr6:26829794-26830000 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 130, 0

Conread position: 62-274
Cow position: chr6:53739560-53739764 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 148, 0

Conread position: 63-263
Cow position: chr6:1263425-1263618 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 149

Conread position: 63-269
Cow position: chr6:11721935-11721740 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 145, 0

Conread position: 63-271
Cow position: chr6:16593223-16593418 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 63-271
Cow position: chr6:35873456-35873262 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 63-275
Cow position: chr6:52696857-52697063 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 154, 0

Conread position: 65-271
Cow position: chr6:20451235-20451429 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.