Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 16-275 |
| Cow position: | chr7:47045539-47045785 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 58, 191 |
| Conread position: | 19-159 |
| Cow position: | chr7:21568129-21567985 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 77, 127 |
| Conread position: | 19-179 |
| Cow position: | chr7:30275313-30275476 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 97 |
| Conread position: | 19-209 |
| Cow position: | chr7:17949956-17950146 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 19-213 |
| Cow position: | chr7:44455751-44455551 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 47, 18 |
| Conread position: | 19-222 |
| Cow position: | chr7:66750730-66750526 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 19-229 |
| Cow position: | chr7:62732286-62732506 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 47, 197 |
| Conread position: | 19-238 |
| Cow position: | chr7:35742870-35743097 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-238 |
| Cow position: | chr7:41444334-41444551 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 40, 104 |
| Conread position: | 19-246 |
| Cow position: | chr7:33809738-33809969 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 51, 86 |
| Conread position: | 19-247 |
| Cow position: | chr7:68575452-68575673 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 99 |
| Conread position: | 19-265 |
| Cow position: | chr7:22792172-22792428 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 190 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 47, 118 |
| Conread position: | 19-267 |
| Cow position: | chr7:45928859-45928614 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 47, 174 |
| Conread position: | 19-271 |
| Cow position: | chr7:39401042-39401292 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 195 |
| Conread position: | 19-271 |
| Cow position: | chr7:64104316-64104064 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 47, 20 |
| Conread position: | 19-275 |
| Cow position: | chr7:4451677-4451928 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 195 |
| Conread position: | 19-275 |
| Cow position: | chr7:21009854-21009601 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 19-275 |
| Cow position: | chr7:40404581-40404832 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 19-275 |
| Cow position: | chr7:47910009-47909755 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 47, 195 |
| Conread position: | 19-275 |
| Cow position: | chr7:56887699-56887447 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 183 |
| Conread position: | 19-275 |
| Cow position: | chr7:64329985-64330228 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 21-210 |
| Cow position: | chr7:23478215-23478021 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 22-271 |
| Cow position: | chr7:48722768-48722517 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 44, 117 |
| Conread position: | 24-181 |
| Cow position: | chr7:19043904-19043739 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 42, 154 |
| Conread position: | 24-210 |
| Cow position: | chr7:58302857-58302664 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 41, 102 |
| Conread position: | 24-210 |
| Cow position: | chr7:63947801-63947607 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 42, 143 |
| Conread position: | 24-244 |
| Cow position: | chr7:13238290-13238063 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 208 |
| Conread position: | 24-271 |
| Cow position: | chr7:55688661-55688419 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 37, 174 |
| Conread position: | 24-275 |
| Cow position: | chr7:49750214-49750464 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 42, 191 |
| Conread position: | 28-155 |
| Cow position: | chr7:44590750-44590614 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 28-209 |
| Cow position: | chr7:43281584-43281781 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 28-222 |
| Cow position: | chr7:20536400-20536603 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 28-261 |
| Cow position: | chr7:61824733-61824498 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 108 |
| Conread position: | 28-270 |
| Cow position: | chr7:26770870-26771102 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 208, 35 |
| Conread position: | 29-210 |
| Cow position: | chr7:33392205-33392405 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 31-202 |
| Cow position: | chr7:17270159-17269981 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 31-210 |
| Cow position: | chr7:49107868-49107690 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 34-239 |
| Cow position: | chr7:69018576-69018788 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 34-265 |
| Cow position: | chr7:23277170-23276929 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 32, 202 |
| Conread position: | 34-271 |
| Cow position: | chr7:21315212-21315445 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 178 |
| Conread position: | 42-275 |
| Cow position: | chr7:65121463-65121693 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 43-275 |
| Cow position: | chr7:53381336-53381557 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 23, 93 |
| Conread position: | 47-271 |
| Cow position: | chr7:53070467-53070682 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 54-210 |
| Cow position: | chr7:67872114-67872271 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 54-268 |
| Cow position: | chr7:8140730-8140524 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 54-271 |
| Cow position: | chr7:759505-759296 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 54-271 |
| Cow position: | chr7:16934656-16934866 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 12, 158 |
| Conread position: | 56-275 |
| Cow position: | chr7:48762809-48762601 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 57-271 |
| Cow position: | chr7:21990001-21990204 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 57-271 |
| Cow position: | chr7:57209486-57209281 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 13, 156 |
| Conread position: | 57-271 |
| Cow position: | chr7:66908599-66908804 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 157 |
| Conread position: | 64-273 |
| Cow position: | chr7:47190377-47190182 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 61, 113 |
Show alignments to all cow chromosomes.