Cow genome map
| Conread name: | unkn-MI-P-A3-abw-f-04-1-UM.s1 |
| Conread position: | 6-275 |
| Cow position: | chr9:58615560-58615290 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 103 |
| Conread position: | 19-204 |
| Cow position: | chr9:46670080-46670270 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 47, 98 |
| Conread position: | 19-208 |
| Cow position: | chr9:62401172-62400974 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 19-210 |
| Cow position: | chr9:3411745-3411546 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 159 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 19-210 |
| Cow position: | chr9:4305922-4305736 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 19-210 |
| Cow position: | chr9:29338055-29338256 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 19-222 |
| Cow position: | chr9:34688632-34688827 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 19-238 |
| Cow position: | chr9:51692471-51692245 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 47, 183 |
| Conread position: | 19-246 |
| Cow position: | chr9:10672186-10671951 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 76, 44 |
| Conread position: | 19-271 |
| Cow position: | chr9:23028881-23028630 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 47, 195 |
| Conread position: | 19-275 |
| Cow position: | chr9:21841415-21841174 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 19-275 |
| Cow position: | chr9:23421735-23421992 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 128 |
| Conread position: | 19-275 |
| Cow position: | chr9:24996522-24996779 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 189, 38 |
| Conread position: | 21-210 |
| Cow position: | chr9:9623089-9623284 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 23-261 |
| Cow position: | chr9:18007750-18007995 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 43, 125 |
| Conread position: | 23-270 |
| Cow position: | chr9:12161749-12161994 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 24-202 |
| Cow position: | chr9:18071636-18071824 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 24-204 |
| Cow position: | chr9:61739897-61739711 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 42, 110 |
| Conread position: | 24-210 |
| Cow position: | chr9:1938881-1938693 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 42, 109 |
| Conread position: | 24-210 |
| Cow position: | chr9:20900128-20900322 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 158 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 42, 140 |
| Conread position: | 24-242 |
| Cow position: | chr9:26087848-26087624 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 42, 10 |
| Conread position: | 24-271 |
| Cow position: | chr9:9515825-9516065 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 24-275 |
| Cow position: | chr9:28774113-28773862 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 25-211 |
| Cow position: | chr9:22438654-22438848 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 41, 84 |
| Conread position: | 28-242 |
| Cow position: | chr9:58747662-58747439 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 32, 115 |
| Conread position: | 28-275 |
| Cow position: | chr9:23005414-23005189 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 28-275 |
| Cow position: | chr9:54997031-54997292 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 36, 62 |
| Conread position: | 30-275 |
| Cow position: | chr9:55796945-55796691 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 52-271 |
| Cow position: | chr9:6252751-6252963 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 160 |
| Conread position: | 54-271 |
| Cow position: | chr9:22655988-22656197 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 54-271 |
| Cow position: | chr9:29106065-29106274 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 54-271 |
| Cow position: | chr9:42570405-42570614 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 157 |
| Conread position: | 54-271 |
| Cow position: | chr9:42868682-42868473 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 12, 157 |
| Conread position: | 57-271 |
| Cow position: | chr9:27038309-27038512 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 151, 0 |
| Conread position: | 63-271 |
| Cow position: | chr9:12285506-12285309 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 63-271 |
| Cow position: | chr9:17302776-17302581 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 63-271 |
| Cow position: | chr9:31810779-31810976 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-271 |
| Cow position: | chr9:59454695-59454498 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 63-273 |
| Cow position: | chr9:10857235-10857433 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 107-275 |
| Cow position: | chr9:12195211-12195054 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 101, 0 |
Show alignments to all cow chromosomes.